Os12g0172400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1618 domain containing protein.
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Os12g0172400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1618 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 379.7 | 0.916 | 3.59 | 1.28 | 0.524 | 1.02 | -0.208 | 1.79 | 0.434 | 4.17 | 20.99 | 931 | -- | -- |
| 388.25 | 0.918 | 3.64 | 0.883 | 0.499 | 0.858 | 0.119 | -- | 0.35 | 3.74 | 20.96 | 995 | -- | -- |
| 379.8 | 0.908 | 3.59 | 1.28 | 0.522 | 1.01 | -- | 1.76 | 0.434 | 4.05 | 21 | 931 | -- | -- |
| 388.28 | 0.918 | 3.64 | 0.88 | 0.507 | 0.859 | -- | -- | 0.348 | 3.88 | 21 | 972 | -- | -- |
| 394.21 | 0.925 | 3.59 | 1.28 | -- | 1.06 | -- | 1.76 | 0.429 | -- | 21.09 | 995 | -- | -- |
| 409.91 | 0.949 | 3.59 | 1.23 | 0.56 | -- | 0.21 | -- | 0.566 | 2.93 | -- | -- | -- | -- |
| 410.02 | 0.948 | 3.59 | 1.22 | 0.563 | -- | -- | -- | 0.564 | 3.11 | -- | -- | -- | -- |
| 402.06 | 0.934 | 3.65 | 0.871 | -- | 0.928 | -- | -- | 0.343 | -- | 20.97 | 1005 | -- | -- |
| 406.23 | 0.939 | 3.68 | -- | 0.494 | 1.16 | -- | -- | 0.208 | 3.64 | 20.95 | 1024 | -- | -- |
| 428.14 | 0.967 | 3.59 | 1.25 | -- | -- | -- | -- | 0.579 | -- | -- | -- | -- | -- |
| 449.51 | 0.992 | 3.62 | -- | 0.588 | -- | -- | -- | 0.428 | 3.11 | -- | -- | -- | -- |
| 414.61 | 0.948 | 3.69 | -- | -- | 1.32 | -- | -- | 0.154 | -- | 20.66 | 2554 | -- | -- |
| 469.23 | 1.01 | 3.62 | -- | -- | -- | -- | -- | 0.44 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 373.53 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 2 | 374.54 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 24 | 6 |
| 4 | 375.47 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 16 |
| 8 | 375.90 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 11 | 376.14 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 23 | 14 |
| 25 | 376.98 | wind | 5.0 | 1440 | < th | dose independent | rect. | 17 | 9 |
| 38 | 377.49 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 16 |
| 43 | 377.58 | wind | 5.0 | 1440 | > th | dose independent | rect. | 17 | 9 |
| 60 | 378.09 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 67 | 378.28 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 12 |
| 78 | 378.51 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 6 | NA |
| 87 | 378.65 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 17 | 9 |
| 93 | 378.76 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 97 | 378.84 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 18 | 7 |
| 121 | 379.34 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 20 |
| 135 | 379.48 | wind | 5.0 | 1440 | < th | dose independent | rect. | 21 | 2 |
| 193 | 380.06 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 18 |
| 225 | 380.39 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 22 | 13 |
| 231 | 380.45 | temperature | 20.0 | 720 | > th | dose independent | sin | 13 | NA |
| 238 | 380.51 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 242 | 380.55 | humidity | 80.0 | 1440 | > th | dose independent | sin | 6 | NA |
| 245 | 380.58 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 7 |
| 253 | 380.66 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 257 | 380.69 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 21 | 4 |
| 277 | 380.78 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 301 | 380.94 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 325 | 381.05 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 352 | 381.26 | atmosphere | 1005.0 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 379 | 381.50 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 380 | 381.51 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 386 | 381.55 | atmosphere | 1005.0 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 401 | 381.64 | humidity | 80.0 | 1440 | < th | dose independent | sin | 6 | NA |
| 421 | 381.74 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 8 | NA |
| 434 | 381.83 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 3 |
| 447 | 381.91 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 450 | 381.93 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 454 | 381.94 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 465 | 382.02 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 499 | 382.21 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 19 | 10 |
| 521 | 382.33 | wind | 5.0 | 1440 | < th | dose independent | sin | 12 | NA |
| 542 | 382.44 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 549 | 382.47 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 584 | 382.70 | wind | 5.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 609 | 382.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 644 | 382.97 | temperature | 20.0 | 720 | < th | dose independent | rect. | 17 | 12 |
| 645 | 382.97 | temperature | 20.0 | 720 | < th | dose independent | rect. | 16 | 14 |
| 676 | 383.08 | humidity | 60.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 684 | 383.12 | atmosphere | 1005.0 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 688 | 383.14 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 19 |
| 744 | 383.36 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 745 | 383.36 | wind | 1.0 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 756 | 383.40 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 790 | 383.52 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 849 | 383.68 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 851 | 383.68 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 887 | 383.80 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 939 | 383.96 | temperature | 20.0 | 720 | < th | dose independent | sin | 14 | NA |
| 976 | 384.07 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 984 | 384.09 | wind | 1.0 | 720 | > th | dose independent | rect. | 9 | 17 |