BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0301200 Os03g0301200|AK065552
(297 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0301200 Similar to COBRA-like protein 7 precursor 578 e-165
Os07g0690900 Phytochelatin synthetase-like conserved region... 323 7e-89
Os06g0685100 Similar to COBRA-like protein 10 precursor 288 4e-78
Os07g0604300 Similar to Phytochelatin synthetase (Fragment) 93 2e-19
Os03g0416300 Similar to Phytochelatin synthetase (Fragment) 88 1e-17
AK102170 86 2e-17
Os05g0386800 Similar to Phytochelatin synthetase-like prote... 85 6e-17
Os10g0497700 Similar to Phytochelatin synthetase 76 3e-14
>Os03g0301200 Similar to COBRA-like protein 7 precursor
Length = 297
Score = 578 bits (1491), Expect = e-165, Method: Compositional matrix adjust.
Identities = 276/276 (100%), Positives = 276/276 (100%)
Query: 1 DAVKISLPIAGVQDATGPEPDKALPTEFPDPSGLDSTTLAIATWQVVCNITTSKGAKPKC 60
DAVKISLPIAGVQDATGPEPDKALPTEFPDPSGLDSTTLAIATWQVVCNITTSKGAKPKC
Sbjct: 1 DAVKISLPIAGVQDATGPEPDKALPTEFPDPSGLDSTTLAIATWQVVCNITTSKGAKPKC 60
Query: 61 CVTFSAYYNDSVIPCNTCACGCPSNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWA 120
CVTFSAYYNDSVIPCNTCACGCPSNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWA
Sbjct: 61 CVTFSAYYNDSVIPCNTCACGCPSNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWA 120
Query: 121 ELKHYNVPKPMPCGDYCGVSINWHISTDYNKGWSARMTLFNWDNVDLANWFAAIVMDKAY 180
ELKHYNVPKPMPCGDYCGVSINWHISTDYNKGWSARMTLFNWDNVDLANWFAAIVMDKAY
Sbjct: 121 ELKHYNVPKPMPCGDYCGVSINWHISTDYNKGWSARMTLFNWDNVDLANWFAAIVMDKAY 180
Query: 181 DGFEKAYSFNSTSVGKNTIFMQGLEGLNYLVKQTNMSGSDYLVPGKQQSVLSFTKKLTPG 240
DGFEKAYSFNSTSVGKNTIFMQGLEGLNYLVKQTNMSGSDYLVPGKQQSVLSFTKKLTPG
Sbjct: 181 DGFEKAYSFNSTSVGKNTIFMQGLEGLNYLVKQTNMSGSDYLVPGKQQSVLSFTKKLTPG 240
Query: 241 INVVAGDGFPSKVFFNGDECAMPQRIPMSNSGFRTH 276
INVVAGDGFPSKVFFNGDECAMPQRIPMSNSGFRTH
Sbjct: 241 INVVAGDGFPSKVFFNGDECAMPQRIPMSNSGFRTH 276
>Os07g0690900 Phytochelatin synthetase-like conserved region family protein
Length = 675
Score = 323 bits (829), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 164/256 (64%), Positives = 200/256 (78%), Gaps = 6/256 (2%)
Query: 19 EPDKALPTEFPDPSGLDSTTLAIATWQVVCNITTSKGAKP-KCCVTFSAYYNDSVIPCNT 77
+P + PTE PDPSGL STTLA+ATWQVVCN+T + +KP CCVTFSA+YN+SVIPC T
Sbjct: 394 QPVRVTPTELPDPSGLASTTLALATWQVVCNMTAAPPSKPPSCCVTFSAFYNESVIPCRT 453
Query: 78 CACGCPSNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGDYC 137
CACGCP++ CSTTA SMLLPP ALL+PF+ R ++A+ WA K VP+PMPCGD C
Sbjct: 454 CACGCPASPAA-ACSTTAPSMLLPPYALLMPFERRGREAVWWAGEKRLGVPRPMPCGDSC 512
Query: 138 GVSINWHISTDYNKGWSARMTLFNWDNVDLANWFAAIVMDK-AYDGFEKAYSFNSTSVGK 196
GVSINWH++TDY GWSAR TLFNW+ D+A WF A+ M+K AYDGFE+A++FN+T++G
Sbjct: 513 GVSINWHVATDYAGGWSARATLFNWEGADVAEWFLAVAMEKQAYDGFEQAFTFNATAMGN 572
Query: 197 NT--IFMQGLEGLNYLVKQTNMSGSDYLVPGKQQSVLSFTKKLT-PGINVVAGDGFPSKV 253
T I M+G EG YL +++NMSG DY V GKQQSVL FTKK + GI+VV GDGFP++V
Sbjct: 573 GTTMILMKGREGFQYLKRESNMSGVDYPVAGKQQSVLLFTKKRSGGGIDVVGGDGFPTRV 632
Query: 254 FFNGDECAMPQRIPMS 269
FNG ECAMPQRIP S
Sbjct: 633 LFNGHECAMPQRIPSS 648
>Os06g0685100 Similar to COBRA-like protein 10 precursor
Length = 683
Score = 288 bits (736), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 139/257 (54%), Positives = 179/257 (69%), Gaps = 8/257 (3%)
Query: 19 EPDKALPTEFPDPSGLDSTTLAIATWQVVCNITTSKGAKPKCCVTFSAYYNDSVIPCNTC 78
+P + P FPD +GL S+T A+A+WQV CNIT K KCCV+FSAYY+DSV+PCNTC
Sbjct: 391 QPVRVSPVVFPDQTGLMSSTPAVASWQVACNITRPKRRAAKCCVSFSAYYDDSVVPCNTC 450
Query: 79 ACGCPSNQRG----PTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCG 134
ACGC G TC A++ LPPEALL+PFDNRT K AWA++KH VP PMPCG
Sbjct: 451 ACGCGGGGGGGNDTATCDADARATPLPPEALLIPFDNRTAKGRAWAKIKHRRVPNPMPCG 510
Query: 135 DYCGVSINWHISTDYNKGWSARMTLFNWDNVDLANWFAAIVMDKAYDGFEKAYSFNSTSV 194
D CG+S+NWHI +Y GW+AR+T+FNW + +WFAA+ M Y G+E YSFN T +
Sbjct: 511 DNCGLSVNWHIMNNYKSGWAARITIFNWQDYTFKDWFAAVTMRDHYSGYENVYSFNGTKM 570
Query: 195 G---KNTIFMQGLEGLNYLVKQTN-MSGSDYLVPGKQQSVLSFTKKLTPGINVVAGDGFP 250
G N+IFMQGL GL YL T+ + D VPGKQQSV+SF++K P +N+ G+GFP
Sbjct: 571 GAPFNNSIFMQGLPGLTYLEPITDGRTPEDPRVPGKQQSVISFSRKDAPNVNIAKGEGFP 630
Query: 251 SKVFFNGDECAMPQRIP 267
+++F+G+ECA+P IP
Sbjct: 631 KRLYFDGEECALPDTIP 647
>Os07g0604300 Similar to Phytochelatin synthetase (Fragment)
Length = 446
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 107/243 (44%), Gaps = 27/243 (11%)
Query: 25 PTEFPDPSGLDSTTLAIATWQVVCNITTSKGAK-PKCCVTFSAYYNDSVIPCNTCACGCP 83
PT+F G TT A TW V C + + P CCV+ S++YND+++ C TC+CGC
Sbjct: 190 PTKFFSQDG-RRTTQAHMTWNVTCTYSQIVAQRSPTCCVSLSSFYNDTIVNCPTCSCGCQ 248
Query: 84 SNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGDYCGVSINW 143
+N+ G + P A +V N+ P C + ++W
Sbjct: 249 NNKPGSCVEGNS-----PYLASVVNTHNKDSLT-----------PLVQCTSHMCPIRVHW 292
Query: 144 HISTDYNKGWSARMTLFNWD-NVDLANWFAAIVMDKAYDGFEKAYSFNSTSVGKNTIF-- 200
H+ +Y + W ++T+ N++ ++ + W + ++D +SFN S+ +
Sbjct: 293 HVKVNYKEYWRVKITVTNFNYRMNYSQW-NLVTQHPSFDNLTTIFSFNYKSLNPYGVIND 351
Query: 201 MQGLEGLNYLVKQTNMSGSDYLVPGKQQSVLSFTKKLTPGINVVAGDGFPSKVFFNGDEC 260
L G+ Y +G D G QS L F KK G FP +V+FNGD C
Sbjct: 352 TAMLWGIKYYNDLLMTAGPD----GNVQSELLF-KKDPKSFTFEKGWAFPRRVYFNGDNC 406
Query: 261 AMP 263
MP
Sbjct: 407 VMP 409
>Os03g0416300 Similar to Phytochelatin synthetase (Fragment)
Length = 458
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 108/251 (43%), Gaps = 43/251 (17%)
Query: 25 PTEFPDPSGLDSTTLAIATWQVVCNITTSKGAK-PKCCVTFSAYYNDSVIPCNTCACGCP 83
PT F G TT A TW V C + + P CCV+ S++YN++++ C CACGC
Sbjct: 192 PTRFISLDG-RRTTQAHVTWNVTCTYSQFVAQRAPTCCVSLSSFYNETIVNCPKCACGC- 249
Query: 84 SNQRGPTCSTTAQSMLL-----PPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGDYCG 138
N++ +C L P + L P T C
Sbjct: 250 QNKKPGSCVEGNSPYLASVVNGPGKGSLTPLVQCTPHM--------------------CP 289
Query: 139 VSINWHISTDYNKGWSARMTLFNWD-NVDLANWFAAIVMDKAYDGFEKAYSFNSTS---- 193
+ ++WH+ +Y W ++T+ NW+ ++ + W +V ++ +SFN S
Sbjct: 290 IRVHWHVKLNYRDYWRVKVTITNWNYRMNYSQW-NLVVQHPNFENVSTVFSFNYKSLNPY 348
Query: 194 -VGKNTIFMQGLEGLNYLVKQTNMSGSDYLVPGKQQSVLSFTKKLTPGINVVAGDGFPSK 252
V +T M G++ N L+ ++G D G QS L F K + G FP +
Sbjct: 349 GVINDTAMMWGVKYYNDLLM---VAGPD----GNVQSELLFRKDRS-TFTFDKGWAFPRR 400
Query: 253 VFFNGDECAMP 263
++FNG+ C MP
Sbjct: 401 IYFNGESCVMP 411
>AK102170
Length = 457
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 36/249 (14%)
Query: 25 PTEFPDPSGLDSTTLAIATWQVVCNITTSKGAK-PKCCVTFSAYYNDSVIPCNTCACGCP 83
PT+F G +T A+ TW V C + K P CCV+ S++YND+++ C TC+CGC
Sbjct: 198 PTKFFTNDGRRATQ-ALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCSCGCQ 256
Query: 84 SNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGDYCGVSINW 143
+N P S L Q A+ K P C + I+W
Sbjct: 257 NNGTSPGSCVNENSPYL-------------QSAID-GPGKWTGQPLVQCTSHMCPIRIHW 302
Query: 144 HISTDYNKGWSARMTLFNWD-NVDLANWFAAIVMDKAYDGFEKAYSFNSTSVG------K 196
H+ +Y + W ++T+ N++ ++ W ++ ++ + +SFN +
Sbjct: 303 HVKLNYKEYWRVKVTITNFNYRMNYTQW-NLVIQHPNFNNITQLFSFNYKPLTPYGGRIN 361
Query: 197 NTIFMQGLEGLNYLVKQTNMSGS--DYLVPGKQQSVLSFTKKLTPGINVVAGDGFPSKVF 254
+T G++ N L+ Q G+ L+ K +F K G FP +V+
Sbjct: 362 DTAMFWGVKFYNDLLMQAGPLGNAQSELLLRKDSMAFTFDK----------GWAFPHRVY 411
Query: 255 FNGDECAMP 263
FNGD C MP
Sbjct: 412 FNGDNCVMP 420
>Os05g0386800 Similar to Phytochelatin synthetase-like protein 2
Length = 457
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 106/247 (42%), Gaps = 32/247 (12%)
Query: 25 PTEFPDPSGLDSTTLAIATWQVVCNITTSKGAK-PKCCVTFSAYYNDSVIPCNTCACGCP 83
PT+F G +T A+ TW V C + K P CCV+ S++YND+++ C TC+CGC
Sbjct: 198 PTKFFTGDGRRATQ-ALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVNCPTCSCGCQ 256
Query: 84 SNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGDYCGVSINW 143
+N P S L Q A+ K P C + I+W
Sbjct: 257 NNGTSPGSCVNENSPYL-------------QSAID-GPGKWTGQPLVQCTSHMCPIRIHW 302
Query: 144 HISTDYNKGWSARMTLFNWD-NVDLANWFAAIVMDKAYDGFEKAYSFNST------SVGK 196
H+ +Y + W ++T+ N++ ++ W + ++ + +SFN S
Sbjct: 303 HVKLNYKEYWRVKITITNFNYRMNYTQW-NLVAQHPNFNNITQLFSFNYKPLTPYGSKIN 361
Query: 197 NTIFMQGLEGLNYLVKQTNMSGSDYLVPGKQQSVLSFTKKLTPGINVVAGDGFPSKVFFN 256
+T G++ N L+ Q G+ QS L +K + G FP +V+FN
Sbjct: 362 DTAMFWGVKFYNDLLMQAGPLGN-------AQSEL-LLRKDSKDFTFDKGWAFPHRVYFN 413
Query: 257 GDECAMP 263
GD C MP
Sbjct: 414 GDNCVMP 420
>Os10g0497700 Similar to Phytochelatin synthetase
Length = 425
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 27/245 (11%)
Query: 25 PTEFPDPSGLDSTTLAIATWQVVCNITTSKGAK-PKCCVTFSAYYNDSVIPCNTCACGCP 83
P+ F P G +T + + TW V+C + K P CCV+ S++ ND + C TC+CGC
Sbjct: 191 PSRFLSPDGRRATQV-LMTWNVICTYSQFLAQKVPSCCVSLSSFDNDKTVDCPTCSCGC- 248
Query: 84 SNQRGPTCSTTAQSMLLPPEALLVPFDNRTQKALAWAELKHYNVPKPMPCGDY-CGVSIN 142
N++ T ++ P ++ R W L + C + C V IN
Sbjct: 249 RNEKSTTGKCVKKNA--PDLQSIIHGPGR----WTWQPL--------LQCTSHMCPVKIN 294
Query: 143 WHISTDYNKGWSARMTLFNWD-NVDLANWFAAIVMDKAYDGFE-KAYSFNSTSVGK--NT 198
WH+ + + ++T+ N + ++ W + D + +++ S VGK +T
Sbjct: 295 WHLMLKDKEHYRVKITVTNLNYRMNFTEWNLVVQYHPILDITQISGFNYKSIQVGKINDT 354
Query: 199 IFMQGLEGLNYLVKQTNMSGSDYLVPGKQQSVLSFTKKLTPGINVVAGDGFPSKVFFNGD 258
+ G++ L+ Q G+ V G+ F T N G FP +V+FNGD
Sbjct: 355 TMLWGVKPYYDLLMQAGPLGN---VQGELIVRKDFRASSTTNNN--KGRAFPVRVYFNGD 409
Query: 259 ECAMP 263
C MP
Sbjct: 410 NCVMP 414
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.133 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,466,857
Number of extensions: 453187
Number of successful extensions: 1108
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1090
Number of HSP's successfully gapped: 8
Length of query: 297
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 197
Effective length of database: 11,814,401
Effective search space: 2327436997
Effective search space used: 2327436997
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)