BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0247900 Os03g0247900|J100067F18
(177 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0247900 Amino acid-binding ACT domain containing protein 311 1e-85
Os08g0118100 Similar to F5O11.14 (ACR8) 95 3e-20
Os03g0413100 Similar to ACR4 81 4e-16
Os08g0533300 Amino acid-binding ACT domain containing protein 80 9e-16
Os03g0598100 Similar to ACR4 78 4e-15
Os04g0391500 Similar to ACR4 74 8e-14
Os08g0533600 Similar to ACR4 72 2e-13
Os02g0555600 Amino acid-binding ACT domain containing protein 68 4e-12
>Os03g0247900 Amino acid-binding ACT domain containing protein
Length = 177
Score = 311 bits (798), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/177 (88%), Positives = 156/177 (88%)
Query: 1 MPRHRSRPCCAVPTSQHQAAKSLSFLPDFPLHPPCVRPKSQPARAVPVRLTRSFFCVQGV 60
MPRHRSRPCCAVPTSQHQAAKSLSFLPDFPLHPPCVRPKSQPARAVPVRLTRSFFCVQGV
Sbjct: 1 MPRHRSRPCCAVPTSQHQAAKSLSFLPDFPLHPPCVRPKSQPARAVPVRLTRSFFCVQGV 60
Query: 61 RLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKTIDE 120
RLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKTIDE
Sbjct: 61 RLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKTIDE 120
Query: 121 VIQRIGTESLRVDEERWPRLCXXXXXXXXXXXXXXXXXXXXXVKKNLFSLGLIRSCS 177
VIQRIGTESLRVDEERWPRLC VKKNLFSLGLIRSCS
Sbjct: 121 VIQRIGTESLRVDEERWPRLCSAEGDAAGRGGGGGLFSLGSLVKKNLFSLGLIRSCS 177
>Os08g0118100 Similar to F5O11.14 (ACR8)
Length = 441
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 70/126 (55%), Gaps = 5/126 (3%)
Query: 57 VQGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPK 116
++GVRLEL DR LL+ VTR FRENGL V AE++T+ DMA NVF+VTD AG +
Sbjct: 316 LEGVRLELCTPDRPALLSDVTRTFRENGLLVAQAEVSTKGDMASNVFYVTDAAGHAVEQS 375
Query: 117 TIDEVIQRIGTESLRVDEERWPRLCXX-----XXXXXXXXXXXXXXXXXXXVKKNLFSLG 171
ID V QR+G + L EE P+L VK+NL SLG
Sbjct: 376 AIDAVRQRVGMDCLVAREEHRPQLYQKAGPRDAVDGNGGGGGIGLFYLGNFVKRNLVSLG 435
Query: 172 LIRSCS 177
LI+SCS
Sbjct: 436 LIKSCS 441
>Os03g0413100 Similar to ACR4
Length = 452
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 58 QGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPA-DPK 116
+G++LEL DR GLL+ VTR+FRENGL+VT AE++TR D A+N F+V D AG A D K
Sbjct: 340 EGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAVDLK 399
Query: 117 TIDEVIQRIGTESLRV 132
T++ + Q IG L+V
Sbjct: 400 TLEAIRQEIGQTVLQV 415
>Os08g0533300 Amino acid-binding ACT domain containing protein
Length = 498
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 58 QGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKT 117
+G+RLEL DR GLL+ VTR+FRE+GLSVTHAE+ TR A NVF+V +G P +
Sbjct: 382 EGLRLELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVAASGEPVEAHA 441
Query: 118 IDEVIQRIGTESLRVDEERW---PRLCXXXXXXXXXXXXXXXXXXXXXVKKNLFSLGLIR 174
++ V IG + L V E+ PR +K L++LGLIR
Sbjct: 442 VEAVRAEIGEQVLFVREDAGGGEPR------SPPGRDRRSLGNMIRSRSEKFLYNLGLIR 495
Query: 175 SCS 177
SCS
Sbjct: 496 SCS 498
>Os03g0598100 Similar to ACR4
Length = 453
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%)
Query: 58 QGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKT 117
+GV+LEL +D+ GLL+ VTR+FREN L+VT AE++TR MA+N F+V D G D KT
Sbjct: 343 EGVKLELCTNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRMAVNTFYVRDSTGGTVDQKT 402
Query: 118 IDEVIQRIG 126
ID + Q IG
Sbjct: 403 IDSIRQAIG 411
>Os04g0391500 Similar to ACR4
Length = 470
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 58 QGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKT 117
G+ LE+R DR GLL+ VTR+FRENGL++ AEI++ A++ F+++D G P + KT
Sbjct: 346 DGLALEVRTGDRAGLLSDVTRIFRENGLTIRRAEISSERGEAVDTFYLSDPQGHPVEAKT 405
Query: 118 IDEVIQRIGTESLRV 132
ID + +IG +LRV
Sbjct: 406 IDAIRAQIGEATLRV 420
>Os08g0533600 Similar to ACR4
Length = 463
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%)
Query: 58 QGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKT 117
G+ LE++ DR GLL+ +TRVFREN LS+ A ITT+D A + F+V+D G P D K
Sbjct: 348 DGLELEVKTEDRAGLLSEITRVFRENSLSIIRAVITTKDGEADDTFYVSDAYGNPVDGKA 407
Query: 118 IDEVIQRIGTESLRV 132
++ + +++G LRV
Sbjct: 408 MEALGEQLGHAVLRV 422
>Os02g0555600 Amino acid-binding ACT domain containing protein
Length = 481
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%)
Query: 58 QGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKT 117
+G LEL DR GLL+ VTRV RE+GL+VT A++TT A+NVF+V D +G P D KT
Sbjct: 358 EGFTLELCGRDRVGLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKT 417
Query: 118 IDEVIQRIG 126
I+ + ++G
Sbjct: 418 IEGLRVQVG 426
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.137 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,456,571
Number of extensions: 204547
Number of successful extensions: 969
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 967
Number of HSP's successfully gapped: 8
Length of query: 177
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 83
Effective length of database: 12,127,685
Effective search space: 1006597855
Effective search space used: 1006597855
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 152 (63.2 bits)