Os03g0247900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid-binding ACT domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0247900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Amino acid-binding ACT domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.05 | 0.477 | 10.1 | 0.414 | 1.9 | -3.23 | 6.17 | -6.51 | 0.052 | 5.28 | 0.8911 | 754 | -- | -- |
| 114.15 | 0.498 | 10.2 | 0.423 | 1.24 | -1.57 | 1.82 | -- | -0.019 | 2.28 | 5.082 | 524 | -- | -- |
| 116.45 | 0.506 | 10.2 | 0.41 | 0.992 | -0.337 | -- | 0.91 | 0.0601 | 21.1 | 0.7611 | 952 | -- | -- |
| 113.25 | 0.496 | 10.2 | 0.455 | 0.753 | -0.791 | -- | -- | 0.00916 | 20.5 | 1.97 | 3005 | -- | -- |
| 117.25 | 0.504 | 10.2 | 0.499 | -- | -1.09 | -- | -0.738 | -0.0895 | -- | 1.608 | 1024 | -- | -- |
| 123.66 | 0.521 | 10.2 | 0.452 | 0.712 | -- | 0.259 | -- | 0.071 | 19.9 | -- | -- | -- | -- |
| 123.79 | 0.521 | 10.2 | 0.446 | 0.716 | -- | -- | -- | 0.072 | 19.8 | -- | -- | -- | -- |
| 111.36 | 0.491 | 10.2 | 0.218 | -- | -1.51 | -- | -- | -0.192 | -- | 2.68 | 5261 | -- | -- |
| 113.06 | 0.495 | 10.2 | -- | 0.779 | -1.21 | -- | -- | -0.00338 | 21.2 | 1.405 | 3058 | -- | -- |
| 151.48 | 0.575 | 10.2 | 0.438 | -- | -- | -- | -- | 0.0618 | -- | -- | -- | -- | -- |
| 129.04 | 0.531 | 10.2 | -- | 0.712 | -- | -- | -- | 0.0223 | 19.8 | -- | -- | -- | -- |
| 111.74 | 0.492 | 10.2 | -- | -- | -1.57 | -- | -- | -0.192 | -- | 2.412 | 5261 | -- | -- |
| 156.53 | 0.584 | 10.2 | -- | -- | -- | -- | -- | 0.0133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.32 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 3 | 96.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 5 | 96.46 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 9 | 96.58 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 13 |
| 10 | 96.58 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 13 | 96.65 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 17 | 96.76 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 24 | 96.92 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 25 | 96.94 | radiation | 1.0 | 270 | > th | dose independent | sin | 17 | NA |
| 35 | 97.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 36 | 97.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 47 | 97.19 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 48 | 97.19 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 52 | 97.21 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 58 | 97.28 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 60 | 97.30 | wind | 3.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 61 | 97.30 | wind | 3.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 62 | 97.32 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 71 | 97.39 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 15 |
| 76 | 97.43 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 78 | 97.44 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 86 | 97.50 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 16 |
| 91 | 97.53 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 93 | 97.53 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 16 |
| 101 | 97.58 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 12 |
| 107 | 97.61 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 118 | 97.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 124 | 97.69 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 128 | 97.70 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 143 | 97.75 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 149 | 97.78 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 154 | 97.81 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 171 | 97.86 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 19 |
| 190 | 97.97 | wind | 5.0 | 43200 | < th | dose dependent | sin | 3 | NA |
| 194 | 98.00 | wind | 3.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 195 | 98.01 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 197 | 98.01 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 212 | 98.02 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 10 |
| 227 | 98.09 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 228 | 98.09 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 229 | 98.09 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 267 | 98.21 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 273 | 98.22 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 285 | 98.26 | wind | 9.0 | 43200 | < th | dose dependent | sin | 3 | NA |
| 298 | 98.29 | wind | 1.0 | 43200 | > th | dose dependent | sin | 3 | NA |
| 361 | 98.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 5 |
| 365 | 98.50 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 397 | 98.64 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 15 |
| 411 | 98.68 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 420 | 98.71 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 8 |
| 422 | 98.71 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 433 | 98.74 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 441 | 98.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 443 | 98.76 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 447 | 98.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 455 | 98.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 456 | 98.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 457 | 98.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 459 | 98.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 474 | 98.85 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 475 | 98.85 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 476 | 98.85 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 492 | 98.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 8 |
| 496 | 98.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 503 | 98.90 | wind | 1.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 515 | 98.94 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 523 | 98.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 556 | 99.04 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 559 | 99.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 5 |
| 563 | 99.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 5 |
| 567 | 99.08 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 579 | 99.11 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 585 | 99.13 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 605 | 99.17 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 610 | 99.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 611 | 99.18 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 612 | 99.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 614 | 99.18 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 620 | 99.19 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 646 | 99.26 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 652 | 99.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 8 |
| 654 | 99.27 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 655 | 99.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 664 | 99.30 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 677 | 99.32 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 694 | 99.35 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 21 |
| 704 | 99.37 | wind | 3.0 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 771 | 99.52 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 813 | 99.59 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 838 | 99.64 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 16 |
| 882 | 99.71 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 17 |
| 919 | 99.79 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 946 | 99.83 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 974 | 99.85 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 984 | 99.87 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 3 |