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Os04g0391500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to ACR4.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0341) R2 : 0.7
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.34 (0.104) R2dC : 0.944 R2C : 0.537
β3 : 1.75 (0.135) R2dE : 0.153 R2E : -0.244
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.236 (0.0716) R2dN8 : 0.00922 R2N8 : -0.00146
σ : 0.639
deviance : 188.13
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_____
C
peak time of C : 19.1
E
wheather : radiation
threshold : 13.07
memory length : 9
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 20.9
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
177.31 0.626 10.8 -0.556 3.31 1.81 -0.0717 -1.82 0.176 19 11.96 10 20.9 --
181.45 0.627 10.8 -0.489 3.32 1.79 0.405 -- 0.168 19.1 12.41 9 20.9 --
177.28 0.62 10.8 -0.555 3.28 1.8 -- -1.81 0.175 19.1 11.87 9 20.8 --
181.89 0.628 10.8 -0.49 3.3 1.76 -- -- 0.184 19.1 12.18 9 20.9 --
248.12 0.734 10.7 -0.573 -- -2.79 -- -0.971 0.154 -- 20.01 632 1.94 --
231.51 0.713 10.8 -0.469 2.66 -- 0.328 -- 0.165 19.9 -- -- -- --
231.83 0.713 10.8 -0.478 2.66 -- -- -- 0.166 19.9 -- -- -- --
232.02 0.709 10.7 -0.478 -- -2.68 -- -- 0.163 -- 420.3 590 2.97 --
188.13 0.639 10.7 -- 3.34 1.75 -- -- 0.236 19.1 13.07 9 20.9 --
616.56 1.16 10.7 -0.507 -- -- -- -- 0.13 -- -- -- -- --
237.84 0.721 10.7 -- 2.66 -- -- -- 0.219 19.9 -- -- -- --
238.02 0.719 10.7 -- -- -2.68 -- -- 0.212 -- 548.3 585 2.95 --
623.34 1.17 10.7 -- -- -- -- -- 0.186 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 165.96 temperature 10.0 270 > th dose dependent rect. 17 6
2 167.45 precipitation 0.1 270 < th dose independent rect. 17 18
3 167.45 precipitation 0.1 270 < th dose dependent rect. 17 18
5 170.14 wind 7.0 270 < th dose independent rect. 17 18
6 170.37 temperature 10.0 270 > th dose dependent rect. 17 18
7 170.85 atmosphere 995.0 270 > th dose dependent rect. 11 6
8 171.05 wind 7.0 270 < th dose independent rect. 16 7
9 171.17 atmosphere 995.0 270 > th dose dependent rect. 12 4
10 171.36 temperature 15.0 270 > th dose independent rect. 11 6
14 172.20 wind 9.0 270 < th dose independent rect. 11 6
16 172.28 atmosphere 1015.0 270 < th dose independent rect. 11 6
17 172.28 temperature 10.0 270 > th dose independent rect. 17 18
18 172.29 wind 1.0 270 > th dose independent rect. 11 6
19 172.30 atmosphere 995.0 270 > th dose independent rect. 11 6
25 173.61 precipitation 0.1 270 < th dose independent rect. 11 6
26 173.61 precipitation 0.1 270 < th dose dependent rect. 11 6
27 173.65 humidity 50.0 270 > th dose independent rect. 17 18
28 173.79 radiation 20.0 10 < th dose dependent rect. 1 16
30 174.20 precipitation 0.1 270 < th dose independent rect. 16 7
31 174.20 precipitation 0.1 270 < th dose dependent rect. 16 7
32 174.24 precipitation 0.1 270 < th dose independent rect. 16 20
33 174.24 precipitation 0.1 270 < th dose dependent rect. 16 20
39 174.81 radiation 1.0 270 > th dose independent rect. 17 19
41 174.93 atmosphere 995.0 270 > th dose independent rect. 17 18
43 175.09 humidity 50.0 90 > th dose dependent rect. 13 4
44 175.12 humidity 60.0 90 > th dose independent rect. 13 4
47 175.40 wind 9.0 270 < th dose independent rect. 23 17
52 175.58 temperature 15.0 270 > th dose independent rect. 23 17
58 176.11 atmosphere 995.0 270 > th dose independent rect. 23 17
59 176.15 humidity 50.0 270 > th dose independent rect. 11 6
60 176.34 radiation 30.0 270 < th dose independent rect. 16 7
62 176.44 wind 1.0 270 > th dose independent rect. 16 7
64 176.46 temperature 10.0 270 > th dose independent rect. 16 7
67 176.48 radiation 10.0 270 < th dose dependent rect. 22 9
68 176.55 temperature 25.0 270 > th dose independent rect. 17 18
74 176.81 precipitation 0.1 270 < th dose independent rect. 15 22
76 176.81 precipitation 0.1 270 < th dose dependent rect. 15 22
77 176.89 temperature 25.0 270 > th dose independent rect. 17 6
94 177.41 humidity 60.0 270 > th dose independent rect. 13 2
96 177.50 precipitation 0.1 270 < th dose independent rect. 6 16
97 177.50 precipitation 0.1 270 < th dose dependent rect. 6 16
102 177.65 atmosphere 1015.0 270 < th dose independent rect. 17 18
108 177.82 atmosphere 995.0 270 > th dose independent rect. 12 4
110 177.83 temperature 25.0 270 > th dose independent rect. 18 4
111 177.87 wind 1.0 270 > th dose independent rect. 12 4
112 177.89 humidity 50.0 270 > th dose independent rect. 23 18
115 178.04 radiation 40.0 270 < th dose dependent rect. 16 7
116 178.04 temperature 25.0 270 > th dose dependent rect. 18 15
131 178.54 radiation 10.0 270 < th dose independent rect. 22 9
133 178.56 wind 9.0 270 < th dose independent rect. 12 4
136 178.59 atmosphere 1015.0 270 < th dose independent rect. 12 4
137 178.59 temperature 10.0 270 > th dose independent rect. 16 20
140 178.63 temperature 30.0 90 < th dose independent rect. 13 4
142 178.68 humidity 60.0 10 > th dose independent rect. 13 5
143 178.68 atmosphere 1015.0 270 < th dose independent rect. 23 17
146 178.71 humidity 90.0 270 < th dose independent rect. 17 6
158 178.95 atmosphere 1015.0 270 < th dose independent rect. 17 6
164 179.07 precipitation 0.1 270 < th dose independent rect. 23 17
165 179.07 precipitation 0.1 270 < th dose dependent rect. 23 17
174 179.18 humidity 50.0 270 > th dose independent rect. 17 6
175 179.19 precipitation 0.1 270 < th dose independent rect. 12 4
176 179.19 precipitation 0.1 270 < th dose dependent rect. 12 4
185 179.34 precipitation 0.1 270 < th dose independent rect. 4 8
187 179.34 precipitation 0.1 270 < th dose dependent rect. 4 8
209 179.66 atmosphere 995.0 270 > th dose independent rect. 17 6
218 179.84 radiation 10.0 10 < th dose dependent sin 3 NA
220 179.89 temperature 30.0 10 < th dose independent rect. 12 6
228 179.99 radiation 10.0 10 < th dose independent rect. 1 16
230 180.00 wind 9.0 270 < th dose dependent rect. 16 7
241 180.12 temperature 10.0 270 > th dose independent rect. 4 8
242 180.12 atmosphere 995.0 270 > th dose independent rect. 4 8
243 180.12 atmosphere 1015.0 270 < th dose independent rect. 4 8
244 180.12 temperature 10.0 270 > th dose independent rect. 12 16
253 180.22 humidity 50.0 10 > th dose dependent rect. 13 5
263 180.32 humidity 90.0 270 < th dose independent rect. 11 6
282 180.71 humidity 50.0 270 > th dose dependent rect. 21 9
283 180.73 humidity 50.0 270 > th dose independent rect. 4 8
286 180.76 radiation 1.0 270 > th dose independent rect. 11 6
288 180.77 atmosphere 995.0 270 > th dose independent rect. 12 16
296 180.86 temperature 10.0 10 > th dose dependent rect. 20 18
303 181.02 wind 9.0 270 < th dose independent rect. 4 8
310 181.12 wind 9.0 270 < th dose dependent rect. 17 5
311 181.16 humidity 60.0 90 > th dose dependent rect. 23 10
314 181.19 atmosphere 1015.0 270 < th dose independent rect. 6 16
326 181.34 temperature 10.0 270 > th dose independent rect. 22 8
327 181.34 temperature 30.0 270 < th dose independent rect. 22 8
328 181.34 humidity 50.0 270 > th dose independent rect. 22 8
331 181.34 atmosphere 995.0 270 > th dose independent rect. 22 8
335 181.34 temperature 10.0 270 > th dose independent rect. 6 16
341 181.43 wind 9.0 270 < th dose independent rect. 22 8
346 181.48 temperature 20.0 10 > th dose dependent rect. 20 18
358 181.73 radiation 1.0 270 < th dose independent rect. 22 20
361 181.81 wind 9.0 270 < th dose independent rect. 12 16
364 181.89 wind 9.0 270 < th dose independent rect. 6 16
370 181.97 atmosphere 995.0 270 > th dose independent rect. 13 2
378 182.11 temperature 30.0 270 < th dose independent rect. 13 2
387 182.22 radiation 1.0 270 < th dose independent rect. 22 18
389 182.23 atmosphere 1000.0 10 > th dose dependent rect. 13 5
408 182.51 wind 9.0 270 < th dose independent rect. 13 2
421 182.64 temperature 10.0 270 > th dose independent rect. 13 2
423 182.64 atmosphere 1010.0 270 < th dose independent rect. 13 2
426 182.64 temperature 10.0 270 > th dose independent rect. 15 22
440 182.79 atmosphere 995.0 10 > th dose dependent rect. 13 7
461 182.99 humidity 90.0 30 < th dose independent rect. 20 18
532 183.49 humidity 50.0 270 > th dose independent rect. 12 17
543 183.52 radiation 1.0 90 > th dose independent rect. 4 9
573 183.63 precipitation 0.1 270 < th dose independent rect. 13 2
574 183.63 radiation 1.0 270 > th dose independent rect. 12 4
575 183.63 precipitation 0.1 270 < th dose dependent rect. 13 2
585 183.75 radiation 40.0 10 < th dose independent rect. 13 7
615 183.83 wind 1.0 270 > th dose independent rect. 17 18
624 183.89 wind 5.0 270 < th dose independent rect. 18 3
657 184.10 precipitation 0.1 270 < th dose independent rect. 22 8
658 184.10 precipitation 0.1 270 < th dose dependent rect. 22 8
659 184.10 radiation 20.0 90 < th dose dependent rect. 23 18
761 184.91 radiation 10.0 43200 < th dose dependent rect. 19 7
765 184.92 radiation 40.0 10 < th dose independent rect. 13 5
787 185.08 humidity 90.0 270 < th dose independent rect. 12 4
789 185.09 radiation 10.0 270 < th dose dependent rect. 22 16
807 185.22 radiation 1.0 270 < th dose dependent rect. 22 20
902 185.67 humidity 50.0 10 > th dose dependent rect. 13 19
908 185.70 temperature 30.0 90 < th dose independent rect. 1 16
931 185.83 temperature 25.0 270 > th dose dependent sin 10 NA
934 185.85 wind 1.0 90 > th dose dependent rect. 13 6
961 185.95 wind 1.0 90 > th dose dependent rect. 13 4
981 186.07 radiation 20.0 10 < th dose dependent rect. 23 21