BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0167400 Os03g0167400|Os03g0167400
(366 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0167400 Protein of unknown function DUF620 family protein 608 e-174
Os03g0606100 Protein of unknown function DUF620 family protein 269 2e-72
Os03g0267500 Protein of unknown function DUF620 family protein 229 2e-60
Os10g0411000 221 7e-58
Os05g0252100 Protein of unknown function DUF620 family protein 221 8e-58
Os10g0411100 Protein of unknown function DUF620 family protein 200 2e-51
Os07g0591100 Protein of unknown function DUF620 family protein 161 9e-40
Os12g0581300 Protein of unknown function DUF620 family protein 101 9e-22
>Os03g0167400 Protein of unknown function DUF620 family protein
Length = 366
Score = 608 bits (1567), Expect = e-174, Method: Compositional matrix adjust.
Identities = 313/366 (85%), Positives = 313/366 (85%)
Query: 1 MRSRVALETLXXXXXXXXXXXXRRKSSGLQAALHRVARRLLSGAGEDARPAADLRVLLSV 60
MRSRVALETL RRKSSGLQAALHRVARRLLSGAGEDARPAADLRVLLSV
Sbjct: 1 MRSRVALETLAEEPGGGEEEAARRKSSGLQAALHRVARRLLSGAGEDARPAADLRVLLSV 60
Query: 61 LACPLSPVPILPRLPRHVASSAQYIIEQFRATTGCGKIEGAVKSMYAAGRVRLAMLQDPX 120
LACPLSPVPILPRLPRHVASSAQYIIEQFRATTGCGKIEGAVKSMYAAGRVRLAMLQDP
Sbjct: 61 LACPLSPVPILPRLPRHVASSAQYIIEQFRATTGCGKIEGAVKSMYAAGRVRLAMLQDPA 120
Query: 121 XXXXXXXXXXXXXHEGSFVMWQLAPSMWIVEMAVAGQHVAAGSDGRVAWRRTPWVGAHAA 180
HEGSFVMWQLAPSMWIVEMAVAGQHVAAGSDGRVAWRRTPWVGAHAA
Sbjct: 121 GGGAGGGGGGGRGHEGSFVMWQLAPSMWIVEMAVAGQHVAAGSDGRVAWRRTPWVGAHAA 180
Query: 181 RGGSRPLRRALQGLDPVTIAAIFSTAEHAGEKLVDGEDCFVLRLDVGPSVLSSWSDGTAE 240
RGGSRPLRRALQGLDPVTIAAIFSTAEHAGEKLVDGEDCFVLRLDVGPSVLSSWSDGTAE
Sbjct: 181 RGGSRPLRRALQGLDPVTIAAIFSTAEHAGEKLVDGEDCFVLRLDVGPSVLSSWSDGTAE 240
Query: 241 VIRHGLTGFFSQRSGLLVRLEDSQLTRIQSPGAAAMYWETTISSSLADYXXXXXXXXXXX 300
VIRHGLTGFFSQRSGLLVRLEDSQLTRIQSPGAAAMYWETTISSSLADY
Sbjct: 241 VIRHGLTGFFSQRSGLLVRLEDSQLTRIQSPGAAAMYWETTISSSLADYRAVDGGGGVHV 300
Query: 301 XXXXXXTAHLARFXXXXXXXXXXTRMEESWTIDDVAFNVPGLGPDAFIPPEEVRRSRFYD 360
TAHLARF TRMEESWTIDDVAFNVPGLGPDAFIPPEEVRRSRFYD
Sbjct: 301 AHSGRSTAHLARFGVGVRAARVVTRMEESWTIDDVAFNVPGLGPDAFIPPEEVRRSRFYD 360
Query: 361 AMAAGK 366
AMAAGK
Sbjct: 361 AMAAGK 366
>Os03g0606100 Protein of unknown function DUF620 family protein
Length = 792
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/313 (45%), Positives = 193/313 (61%), Gaps = 15/313 (4%)
Query: 53 DLRVLLSVLACPLSPVPI-----LPRLPRH----VASSAQYIIEQFRATTGCGKIEGAVK 103
DLR+LL V+ PL+PV + LP L SSAQYI++Q+ A +G K+ +V+
Sbjct: 270 DLRLLLGVMGAPLAPVHVSAAEPLPHLSIKDTPIETSSAQYILQQYLAASGGQKLLASVR 329
Query: 104 SMYAAGRVRLAMLQ-DPXXXXXXXXXXXXXXHEGSFVMWQLAPSMWIVEMAVAGQHVAAG 162
+ Y G+VR+ + + G FV+WQ+AP MW +E+AV G V AG
Sbjct: 330 NAYTMGKVRMVATEFETAGRLVKNRNAARCAEPGRFVLWQMAPEMWYIELAVGGSKVHAG 389
Query: 163 SDGRVAWRRTPWVGAHAARGGSRPLRRALQGLDPVTIAAIFSTAEHAGEKLVDGEDCFVL 222
+G++ WR TPW+GAHAA+G RPLRRALQGLDP+T A++F+ A GE+ V+GEDCF+L
Sbjct: 390 CNGKLVWRHTPWLGAHAAKGPVRPLRRALQGLDPLTTASMFAGARCIGERKVNGEDCFIL 449
Query: 223 RLDVGPSVLSSWSDGTAEVIRHGLTGFFSQRSGLLVRLEDSQLTRIQS-PGAAAMYWETT 281
+L P L + S+G AE+IRH + G+FSQR+GLLV +EDS LTRIQS G A+YWETT
Sbjct: 450 KLCTEPETLKARSEGLAEIIRHVMFGYFSQRTGLLVHIEDSHLTRIQSTTGGDAVYWETT 509
Query: 282 ISSSLADYXXXXXXXXXXXXXXXXXTAHLARFXXXXXXXXXXTRMEESWTIDDVAFNVPG 341
I+S + DY L RF TRMEE+W+I++VAFNVPG
Sbjct: 510 INSFIEDYRPVEGIMIAHSGRSAVT---LFRF-GEVAMSHTKTRMEEAWSIEEVAFNVPG 565
Query: 342 LGPDAFIPPEEVR 354
L D FIPP +++
Sbjct: 566 LSMDCFIPPTDIK 578
>Os03g0267500 Protein of unknown function DUF620 family protein
Length = 441
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 191/340 (56%), Gaps = 29/340 (8%)
Query: 43 GAGEDARPA-ADLRVLLSVLACPLSPVPI--LPRLPRHV-----------ASSAQYIIEQ 88
GAGE + +L+++L V+ PL P+P+ + P V +S+A+YII+Q
Sbjct: 60 GAGEPCSMSRGELQLMLGVIGAPLIPLPVDHAKQSPCSVLCEQLKADPIESSTAKYIIQQ 119
Query: 89 FRATTGCGKIEGAVKSMYAAGRVRLAMLQ-----------DPXXXXXXXXXXXXXXHEGS 137
+ A +G V +MYA G+VR+ + G
Sbjct: 120 YIAASGGEWALNKVTNMYAMGKVRMTAAELNSSDADGGGGGGGGHRGGKKSSKNGGEVGG 179
Query: 138 FVMWQLAPSMWIVEMAVAGQHVAAGSDGRVAWRRTPWVGAHAARGGSRPLRRALQGLDPV 197
FV+WQ P +W +E+ V+G ++AGSDG+VAWR+TPW +HA+RG RPLRR+LQGLDP+
Sbjct: 180 FVLWQKKPELWSLELVVSGCKISAGSDGKVAWRQTPWHQSHASRGPPRPLRRSLQGLDPM 239
Query: 198 TIAAIFSTAEHAGEKLVDGEDCFVLRLDVGPSVLSSWSDGTAEVIRHGLTGFFSQRSGLL 257
A++F+ A GE+ VDGEDCFVL+++ S L + + + E+IRH + G+FSQR+GLL
Sbjct: 240 LTASLFADAVCIGERSVDGEDCFVLKVEAEASSLRARNSSSVEIIRHTVWGYFSQRTGLL 299
Query: 258 VRLEDSQLTRIQSPGAAAMYWETTISSSLADYXXXXXXXXXXXXXXXXXTAHLARFXXXX 317
V+LEDS L +I+S G +++WETT+ S L DY L RF
Sbjct: 300 VQLEDSHLLQIKSSGHGSVFWETTMESHLHDY---RAVDGVNIAHAGRTAVSLVRF-GDS 355
Query: 318 XXXXXXTRMEESWTIDDVAFNVPGLGPDAFIPPEEVRRSR 357
TRMEE W I++V FN+ GL D F+PP +++ S+
Sbjct: 356 SDGNTRTRMEEVWNIEEVDFNIWGLSMDCFLPPSDLKDSK 395
>Os10g0411000
Length = 220
Score = 221 bits (563), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 120/163 (73%), Gaps = 3/163 (1%)
Query: 191 LQGLDPVTIAAIFSTAEHAGEKLVDGEDCFVLRLDVGPSVLSSWSDGTAEVIRHGLTGFF 250
+ GLDPVTIA++FS AEH GEK VDGEDCF LRLDV PSVLS+W DG AEVIRHG+TG+F
Sbjct: 37 VHGLDPVTIASVFSAAEHVGEKAVDGEDCFALRLDVAPSVLSAWGDGAAEVIRHGMTGYF 96
Query: 251 SQRSGLLVRLEDSQLTRIQSPGAAAMYWETTISSSLADYXXXXXXXXXXXXXXXXXTAHL 310
SQRSGLL RL+DSQLTRIQ+PGA AMYWETT+SS L DY AHL
Sbjct: 97 SQRSGLLARLDDSQLTRIQTPGAPAMYWETTVSSRLGDY---RAADGAVVAHAGTSVAHL 153
Query: 311 ARFXXXXXXXXXXTRMEESWTIDDVAFNVPGLGPDAFIPPEEV 353
ARF TRMEE+WTIDDVAFNV GL P++FI PEEV
Sbjct: 154 ARFGADVGAARAVTRMEEAWTIDDVAFNVAGLCPESFIAPEEV 196
>Os05g0252100 Protein of unknown function DUF620 family protein
Length = 488
Score = 221 bits (562), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 137/331 (41%), Positives = 180/331 (54%), Gaps = 32/331 (9%)
Query: 52 ADLRVLLSVLACPLSPVPILPR--------------LPRHV-ASSAQYIIEQFRATTGCG 96
A+++++L V+ PL P + R P + AS A+YI+EQ+ A G
Sbjct: 64 AEVQLMLGVVGAPLVPQAVEARKAMVAGRGVGGEGEEPLDLEASKARYIVEQYVAAAGGE 123
Query: 97 KIEGAVKSMYAAGRVRLAMLQDPXXXXXXXXXXXXXXH-EGSFVMWQLAPSMWIVEMAVA 155
GA SMYA G+VR+ G FV+WQ P +W VEM VA
Sbjct: 124 AALGAATSMYAMGKVRMRTTTTSKANKGKVMGVAAGGEVAGGFVVWQKKPDLWCVEMVVA 183
Query: 156 GQ-HVAAGSDGRVAWRRTPWVGAHAARGGSRPLRRALQGLDPVTIAAIFSTAEHAGEKLV 214
G ++AGSDG+VAWR+TPW AHA+RG RPLRR +QGLDP + A +FS+A GE+ V
Sbjct: 184 GGVKMSAGSDGKVAWRQTPWQEAHASRGPPRPLRRCIQGLDPKSTADLFSSAAWVGERCV 243
Query: 215 DGEDCFVLRLDVGPSVLSSWSDGTAEVIRHGLTGFFSQRSGLLVRLEDSQLTRIQSPGAA 274
DG+DCFVLR+D + L + S G EV+RH + G+FSQR+GLLVRLEDS L RI AA
Sbjct: 244 DGDDCFVLRVDADHAALRARSSGDVEVVRHAVLGYFSQRTGLLVRLEDSHLLRIGLAHAA 303
Query: 275 A--MYWETTISSSLADYXXXXXXXXXXXXXXXXXTAHLARFXXXXXXXXX---------- 322
A YWETT+ SS+ DY L+RF
Sbjct: 304 AESAYWETTMESSIGDY---RAVDGINIAHAGRTAVSLSRFESADDAAAAARGSNKRSWG 360
Query: 323 XTRMEESWTIDDVAFNVPGLGPDAFIPPEEV 353
T MEE+W+I++V FNV GL D F+PP ++
Sbjct: 361 TTTMEETWSIEEVDFNVVGLSMDCFLPPRDL 391
>Os10g0411100 Protein of unknown function DUF620 family protein
Length = 216
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/184 (66%), Positives = 134/184 (72%), Gaps = 16/184 (8%)
Query: 24 RKSSGLQAALHRVAR-----RLLSGAGEDA---------RPAADLRVLLSVLACPLSPVP 69
R+ +GL AALHR AR R LSG G RP+ DLRVLLSVLACPLSPVP
Sbjct: 22 RRKTGLHAALHRWARARIPLRFLSGGGGGGGVGGGGGGGRPSPDLRVLLSVLACPLSPVP 81
Query: 70 ILPRLPRHVASSAQYIIEQFRATTGCGKIEGAVKSMYAAGRVRLAMLQDPXXXXXXXXXX 129
+LPR PR+VASSAQYI+EQFRATTGC KIEGA KSMYAAGRVR+AM +P
Sbjct: 82 VLPRHPRNVASSAQYILEQFRATTGCAKIEGAAKSMYAAGRVRMAMAPEP-GGGIGIGGG 140
Query: 130 XXXXHEGSFVMWQLAPSMWIVEMAVAGQHVAAGSDGRVAWRRTPWVGAHAAR-GGSRPLR 188
HEG FV+WQL P MW+VEMAVAG VAAG DGRVAWRRTPW+ AHAAR GG+RPLR
Sbjct: 141 GGGGHEGCFVVWQLVPDMWLVEMAVAGHAVAAGCDGRVAWRRTPWLDAHAARGGGARPLR 200
Query: 189 RALQ 192
RALQ
Sbjct: 201 RALQ 204
>Os07g0591100 Protein of unknown function DUF620 family protein
Length = 380
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 106/170 (62%), Gaps = 5/170 (2%)
Query: 186 PLRRALQGLDPVTIAAIFSTAEHAGEKLVDGEDCFVLRLDVGPSVLSSWSDGTAEVIRHG 245
PL +QGLDP+T A +F+ A GEK V+GEDCF+L+L P L S+G AE+IRH
Sbjct: 157 PLLATMQGLDPLTTAGLFAEARCVGEKKVNGEDCFILKLSADPQTLKQRSEGPAEIIRHV 216
Query: 246 LTGFFSQRSGLLVRLEDSQLTRIQ-SPGAAAMYWETTISSSLADYXXXXXXXXXXXXXXX 304
L G+FSQR+GL+V +EDS LTRIQ G A+YWETTISS+L DY
Sbjct: 217 LFGYFSQRTGLIVHIEDSHLTRIQPHSGGDAVYWETTISSALEDYRPVEGIMIAHAGRSA 276
Query: 305 XXTAHLARFXXXXXXXXXXTRMEESWTIDDVAFNVPGLGPDAFIPPEEVR 354
L RF TRMEE+W+I++VAFNVPGL D FIPP ++R
Sbjct: 277 VT---LFRF-GEAAMSHTKTRMEEAWSIEEVAFNVPGLSVDCFIPPADIR 322
>Os12g0581300 Protein of unknown function DUF620 family protein
Length = 158
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 243 RHGLTGFFSQRSGLLVRLEDSQLTRIQSP-GAAAMYWETTISSSLADYXXXXXXXXXXXX 301
RH L G+FSQ++GLLV LEDS LTRIQS G A+YWETTI+S + DY
Sbjct: 1 RHVLFGYFSQKTGLLVHLEDSHLTRIQSTTGGDAVYWETTINSFIEDYRPVEGIMVAHAG 60
Query: 302 XXXXXTAHLARFXXXXXXXXXXTRMEESWTIDDVAFNVPGLGPDAFIPPEEVR 354
L RF TRMEE+W+I++VAFNVPGL D FIPP +++
Sbjct: 61 RSAVT---LFRFGEVAMSHTK-TRMEEAWSIEEVAFNVPGLSIDCFIPPTDIK 109
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.134 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,261,944
Number of extensions: 439947
Number of successful extensions: 1241
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1223
Number of HSP's successfully gapped: 8
Length of query: 366
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 264
Effective length of database: 11,709,973
Effective search space: 3091432872
Effective search space used: 3091432872
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)