Os12g0581300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF620 family protein.
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Os12g0581300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF620 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.55 | 0.375 | 9.17 | -0.664 | 1.53 | -2.72 | 0.737 | 1.41 | -0.126 | 22.6 | 30.49 | 90 | -- | -- |
| 65.51 | 0.377 | 9.15 | -0.428 | 1.54 | -2.71 | 1.02 | -- | -0.0883 | 22.6 | 29.87 | 91 | -- | -- |
| 65.54 | 0.377 | 9.17 | -0.73 | 1.52 | -2.68 | -- | 1.82 | -0.133 | 22.6 | 30.65 | 84 | -- | -- |
| 69.67 | 0.389 | 9.15 | -0.464 | 1.52 | -2.69 | -- | -- | -0.0822 | 22.6 | 29.94 | 100 | -- | -- |
| 97.62 | 0.46 | 9.16 | -0.924 | -- | -3.35 | -- | 1.51 | -0.165 | -- | 32.46 | 645 | -- | -- |
| 162.36 | 0.597 | 9.03 | 0.224 | 1.41 | -- | 0.901 | -- | 0.44 | 20.4 | -- | -- | -- | -- |
| 164.87 | 0.601 | 9.03 | 0.197 | 1.41 | -- | -- | -- | 0.441 | 20.3 | -- | -- | -- | -- |
| 98.07 | 0.461 | 9.12 | -0.659 | -- | -3.32 | -- | -- | -0.131 | -- | 31.41 | 648 | -- | -- |
| 74.76 | 0.403 | 9.13 | -- | 1.5 | -2.5 | -- | -- | 0.00358 | 22.4 | 30.06 | 91 | -- | -- |
| 275.12 | 0.775 | 9 | 0.188 | -- | -- | -- | -- | 0.426 | -- | -- | -- | -- | -- |
| 165.9 | 0.603 | 9.04 | -- | 1.41 | -- | -- | -- | 0.419 | 20.3 | -- | -- | -- | -- |
| 108.02 | 0.484 | 9.1 | -- | -- | -3.09 | -- | -- | -0.0225 | -- | 31.89 | 626 | -- | -- |
| 276.06 | 0.776 | 9 | -- | -- | -- | -- | -- | 0.405 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 3 | 61.87 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 8 | 63.67 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 9 | 63.74 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 10 | 63.75 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 13 | 63.98 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 15 | 64.13 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 23 | 65.03 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 34 | 66.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 35 | 66.85 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 40 | 67.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 43 | 67.26 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 44 | 67.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 45 | 67.37 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 99 | 68.46 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 129 | 68.85 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 20 |
| 175 | 69.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 181 | 69.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 23 |
| 184 | 69.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 185 | 69.35 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 215 | 69.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 235 | 69.50 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 266 | 69.65 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 368 | 70.03 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 372 | 70.05 | temperature | 10 | 1440 | > th | dose dependent | sin | 7 | NA |
| 426 | 70.18 | temperature | 30 | 1440 | < th | dose dependent | sin | 7 | NA |
| 504 | 70.38 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 507 | 70.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 513 | 70.40 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 11 |
| 551 | 70.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 592 | 70.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 11 |
| 645 | 70.63 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 940 | 71.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 972 | 71.28 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |