Os03g0167400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF620 family protein.
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Os03g0167400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF620 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 188.6 | 0.645 | 8.78 | 0.779 | 0.447 | -1.57 | 0.457 | -1.3 | -0.485 | 10 | 22.04 | 2079 | -- | -- |
| 192.31 | 0.646 | 8.74 | 1.18 | 0.454 | -1.52 | 0.563 | -- | -0.379 | 9.9 | 22.11 | 2100 | -- | -- |
| 189.4 | 0.641 | 8.78 | 0.779 | 0.444 | -1.56 | -- | -1.34 | -0.487 | 10.1 | 22 | 2080 | -- | -- |
| 193.56 | 0.648 | 8.73 | 1.22 | 0.426 | -1.53 | -- | -- | -0.37 | 9.93 | 22.19 | 2204 | -- | -- |
| 200.42 | 0.659 | 8.79 | 0.818 | -- | -1.64 | -- | -1.34 | -0.461 | -- | 22.01 | 2205 | -- | -- |
| 273.61 | 0.775 | 8.85 | 0.548 | 0.555 | -- | 0.575 | -- | -0.901 | 10 | -- | -- | -- | -- |
| 274.87 | 0.776 | 8.85 | 0.572 | 0.551 | -- | -- | -- | -0.899 | 10.2 | -- | -- | -- | -- |
| 204.22 | 0.666 | 8.74 | 1.21 | -- | -1.57 | -- | -- | -0.343 | -- | 22.27 | 2231 | -- | -- |
| 225.41 | 0.699 | 8.77 | -- | 0.449 | -1.19 | -- | -- | -0.564 | 9.77 | 22.4 | 2210 | -- | -- |
| 293.29 | 0.8 | 8.87 | 0.564 | -- | -- | -- | -- | -0.901 | -- | -- | -- | -- | -- |
| 283.49 | 0.788 | 8.86 | -- | 0.548 | -- | -- | -- | -0.963 | 10.1 | -- | -- | -- | -- |
| 237.07 | 0.717 | 8.79 | -- | -- | -1.24 | -- | -- | -0.561 | -- | 22.41 | 2228 | -- | -- |
| 301.68 | 0.811 | 8.88 | -- | -- | -- | -- | -- | -0.963 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 188.82 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 3 |
| 2 | 188.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 18 | 192.30 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 42 | 193.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 81 | 194.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 104 | 194.70 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 122 | 195.02 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 127 | 195.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 165 | 195.49 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 246 | 196.21 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 344 | 196.90 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 570 | 198.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 581 | 198.50 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 608 | 198.69 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 617 | 198.72 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 621 | 198.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |