Os10g0411100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF620 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0411100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF620 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 168.09 | 0.609 | 5.31 | -0.466 | 0.412 | 1.05 | 0.339 | 1.05 | -0.55 | 11 | 22.41 | 2173 | -- | -- |
| 170.7 | 0.608 | 5.29 | -0.125 | 0.389 | 1.03 | 0.465 | -- | -0.491 | 11.1 | 22.6 | 2207 | -- | -- |
| 168.53 | 0.605 | 5.31 | -0.478 | 0.414 | 1.04 | -- | 1.12 | -0.556 | 11.2 | 22.4 | 2142 | -- | -- |
| 171.24 | 0.609 | 5.27 | -0.0921 | 0.406 | 1.04 | -- | -- | -0.454 | 11.2 | 22.5 | 2201 | -- | -- |
| 178.39 | 0.622 | 5.31 | -0.454 | -- | 1.11 | -- | 1.09 | -0.526 | -- | 22.56 | 2249 | -- | -- |
| 212.08 | 0.683 | 5.35 | -0.514 | 0.505 | -- | 0.454 | -- | -0.842 | 11 | -- | -- | -- | -- |
| 212.92 | 0.683 | 5.35 | -0.495 | 0.502 | -- | -- | -- | -0.84 | 11.2 | -- | -- | -- | -- |
| 181.03 | 0.627 | 5.27 | -0.0618 | -- | 1.11 | -- | -- | -0.42 | -- | 22.6 | 2265 | -- | -- |
| 171.39 | 0.61 | 5.26 | -- | 0.4 | 1.07 | -- | -- | -0.433 | 11.1 | 22.5 | 2217 | -- | -- |
| 228.67 | 0.707 | 5.36 | -0.507 | -- | -- | -- | -- | -0.845 | -- | -- | -- | -- | -- |
| 219.37 | 0.693 | 5.34 | -- | 0.507 | -- | -- | -- | -0.785 | 11.3 | -- | -- | -- | -- |
| 181.13 | 0.627 | 5.27 | -- | -- | 1.13 | -- | -- | -0.414 | -- | 22.52 | 2265 | -- | -- |
| 235.46 | 0.716 | 5.35 | -- | -- | -- | -- | -- | -0.788 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.47 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 13 |
| 4 | 171.05 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 9 | 171.66 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 10 | 171.69 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 11 | 171.69 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 20 | 171.81 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 38 | 172.02 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 17 | 10 |
| 53 | 172.19 | temperature | 15.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 63 | 172.26 | temperature | 20.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 66 | 172.26 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 70 | 172.28 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 71 | 172.30 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 214 | 173.02 | temperature | 25.0 | 4320 | < th | dose dependent | sin | 14 | NA |
| 237 | 173.10 | temperature | 25.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 257 | 173.19 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 282 | 173.27 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 21 |
| 471 | 173.89 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 473 | 173.89 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 5 |
| 534 | 174.07 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 587 | 174.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 629 | 174.34 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 644 | 174.39 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 12 | NA |
| 654 | 174.42 | temperature | 30.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 655 | 174.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 6 |
| 705 | 174.58 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 776 | 174.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 837 | 174.98 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 838 | 174.98 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 898 | 175.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 949 | 175.29 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 19 |