Os07g0591100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF620 family protein.
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Os07g0591100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF620 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 259.72 | 0.757 | 7.15 | -1.3 | 2.57 | 1.33 | 1.54 | 0.0139 | -0.334 | 3.22 | 69 | 1221 | -- | -- |
| 259.58 | 0.75 | 7.15 | -1.29 | 2.57 | 1.33 | 1.59 | -- | -0.328 | 3.25 | 69 | 1200 | -- | -- |
| 266.9 | 0.761 | 7.15 | -1.28 | 2.56 | 1.32 | -- | 0.418 | -0.332 | 3.16 | 68.55 | 1216 | -- | -- |
| 267.23 | 0.761 | 7.16 | -1.33 | 2.56 | 1.34 | -- | -- | -0.342 | 3.16 | 68.3 | 1215 | -- | -- |
| 613 | 1.15 | 7.16 | -1.39 | -- | 2.15 | -- | 0.115 | -0.295 | -- | 68 | 1178 | -- | -- |
| 323.67 | 0.843 | 7.16 | -1.01 | 2.84 | -- | 1.66 | -- | -0.332 | 2.96 | -- | -- | -- | -- |
| 332.85 | 0.854 | 7.17 | -1.05 | 2.84 | -- | -- | -- | -0.341 | 2.9 | -- | -- | -- | -- |
| 612.95 | 1.15 | 7.16 | -1.39 | -- | 2.15 | -- | -- | -0.281 | -- | 68.02 | 1178 | -- | -- |
| 312.51 | 0.823 | 7.13 | -- | 2.58 | 1.15 | -- | -- | -0.198 | 3.12 | 68.18 | 1215 | -- | -- |
| 797.99 | 1.32 | 7.15 | -0.931 | -- | -- | -- | -- | -0.268 | -- | -- | -- | -- | -- |
| 362 | 0.89 | 7.14 | -- | 2.82 | -- | -- | -- | -0.224 | 2.9 | -- | -- | -- | -- |
| 662.74 | 1.2 | 7.12 | -- | -- | 1.95 | -- | -- | -0.13 | -- | 68.4 | 1178 | -- | -- |
| 820.84 | 1.34 | 7.13 | -- | -- | -- | -- | -- | -0.165 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 257.55 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 2 | 258.32 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 6 |
| 7 | 259.04 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 16 | 260.14 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 49 | 262.67 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 7 |
| 58 | 263.63 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 14 |
| 64 | 264.13 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 79 | 265.92 | humidity | 70.0 | 720 | > th | dose independent | sin | 11 | NA |
| 87 | 266.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 14 |
| 88 | 266.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 94 | 266.85 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 109 | 266.98 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 14 |
| 110 | 266.99 | humidity | 80.0 | 720 | < th | dose independent | rect. | 18 | 3 |
| 126 | 267.55 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 16 |
| 131 | 267.65 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 155 | 268.14 | humidity | 80.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 174 | 268.73 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 194 | 269.38 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 203 | 269.66 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 207 | 269.78 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 211 | 269.89 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 234 | 270.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 235 | 270.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 236 | 270.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 240 | 270.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 10 |
| 241 | 270.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 268 | 270.87 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 271 | 270.97 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 21 | 7 |
| 316 | 271.71 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 17 |
| 335 | 271.94 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 336 | 271.97 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 348 | 272.18 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 351 | 272.24 | humidity | 50.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 364 | 272.26 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 384 | 272.64 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 7 |
| 386 | 272.65 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 8 |
| 413 | 273.21 | humidity | 70.0 | 720 | < th | dose independent | sin | 11 | NA |
| 440 | 273.32 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 441 | 273.35 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 472 | 273.82 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 18 |
| 473 | 273.82 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 477 | 273.87 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 515 | 274.14 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 526 | 274.29 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 14 | 6 |
| 540 | 274.31 | humidity | 80.0 | 720 | > th | dose independent | rect. | 19 | 3 |
| 543 | 274.33 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 544 | 274.33 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 545 | 274.33 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 548 | 274.33 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 549 | 274.33 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 554 | 274.33 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 555 | 274.33 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 556 | 274.33 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 564 | 274.39 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 566 | 274.41 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 583 | 274.48 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 19 |
| 587 | 274.48 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 588 | 274.49 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 13 |
| 635 | 274.76 | humidity | 70.0 | 1440 | < th | dose independent | sin | 16 | NA |
| 644 | 274.81 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 645 | 274.81 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 648 | 274.82 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 655 | 274.89 | wind | 1.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 661 | 274.93 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 3 |
| 666 | 274.97 | humidity | 80.0 | 1440 | < th | dose dependent | no | NA | NA |
| 668 | 274.99 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 672 | 275.01 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 677 | 275.04 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 681 | 275.05 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 695 | 275.09 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 700 | 275.10 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 717 | 275.17 | humidity | 80.0 | 10 | > th | dose independent | rect. | 21 | 7 |
| 728 | 275.22 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 743 | 275.26 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 6 |
| 745 | 275.26 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 754 | 275.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 764 | 275.35 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 839 | 275.56 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 852 | 275.61 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 10 |
| 921 | 275.84 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 929 | 275.86 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 959 | 275.93 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |