BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0591100 Os07g0591100|J075155A07
(380 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0591100 Protein of unknown function DUF620 family protein 526 e-150
Os03g0606100 Protein of unknown function DUF620 family protein 306 2e-83
Os12g0581300 Protein of unknown function DUF620 family protein 224 7e-59
Os03g0267500 Protein of unknown function DUF620 family protein 218 9e-57
Os05g0252100 Protein of unknown function DUF620 family protein 192 3e-49
Os03g0167400 Protein of unknown function DUF620 family protein 187 8e-48
Os10g0411000 170 2e-42
>Os07g0591100 Protein of unknown function DUF620 family protein
Length = 380
Score = 526 bits (1356), Expect = e-150, Method: Compositional matrix adjust.
Identities = 276/380 (72%), Positives = 276/380 (72%)
Query: 1 MWFIHGCEKXXXXXXXXXXXXXXXXXXAATGCCSRCGTRTPWARCXXXXXXXXXXXXXXX 60
MWFIHGCEK AATGCCSRCGTRTPWARC
Sbjct: 1 MWFIHGCEKCRSRRRRSTSCSSTWRRRAATGCCSRCGTRTPWARCGWWRPSSRPRRASSR 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXTCGTSSSPSAAARCTRDPXXXXXXXXXXXXXXXXXX 120
TCGTSSSPSAAARCTRDP
Sbjct: 61 TAGPAAAAPPPSSRGASSSGRWRPTCGTSSSPSAAARCTRDPTAASSGATRRGSAPTPPR 120
Query: 121 XXXXXXXXXXXXGHLTAARSGLADPPISITLTGVFSPLLATMQGLDPLTTAGLFAEARCV 180
GHLTAARSGLADPPISITLTGVFSPLLATMQGLDPLTTAGLFAEARCV
Sbjct: 121 APCARSAASSRSGHLTAARSGLADPPISITLTGVFSPLLATMQGLDPLTTAGLFAEARCV 180
Query: 181 GEKKVNGEDCFILKLSADPQTLKQRSEGPAEIIRHVLFGYFSQRTGLIVHIEDSHLTRIQ 240
GEKKVNGEDCFILKLSADPQTLKQRSEGPAEIIRHVLFGYFSQRTGLIVHIEDSHLTRIQ
Sbjct: 181 GEKKVNGEDCFILKLSADPQTLKQRSEGPAEIIRHVLFGYFSQRTGLIVHIEDSHLTRIQ 240
Query: 241 PHSGGDAVYWETTISSALEDYRPVEGIMIAHAGRSAVTLFRFGEAAMSHTKTRMEEAWSI 300
PHSGGDAVYWETTISSALEDYRPVEGIMIAHAGRSAVTLFRFGEAAMSHTKTRMEEAWSI
Sbjct: 241 PHSGGDAVYWETTISSALEDYRPVEGIMIAHAGRSAVTLFRFGEAAMSHTKTRMEEAWSI 300
Query: 301 EEVAFNVPGLSVDCFIPPADIRSGPVGESCELPPPAAAPHGEXXXXXXXXXXXXXXXXXH 360
EEVAFNVPGLSVDCFIPPADIRSGPVGESCELPPPAAAPHGE H
Sbjct: 301 EEVAFNVPGLSVDCFIPPADIRSGPVGESCELPPPAAAPHGERARHPARVAAVDRAPPHH 360
Query: 361 NAGGANVGRRGDKIMWRVEV 380
NAGGANVGRRGDKIMWRVEV
Sbjct: 361 NAGGANVGRRGDKIMWRVEV 380
>Os03g0606100 Protein of unknown function DUF620 family protein
Length = 792
Score = 306 bits (783), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/190 (77%), Positives = 163/190 (85%), Gaps = 6/190 (3%)
Query: 153 GVFSPLLATMQGLDPLTTAGLFAEARCVGEKKVNGEDCFILKLSADPQTLKQRSEGPAEI 212
G PL +QGLDPLTTA +FA ARC+GE+KVNGEDCFILKL +P+TLK RSEG AEI
Sbjct: 409 GPVRPLRRALQGLDPLTTASMFAGARCIGERKVNGEDCFILKLCTEPETLKARSEGLAEI 468
Query: 213 IRHVLFGYFSQRTGLIVHIEDSHLTRIQPHSGGDAVYWETTISSALEDYRPVEGIMIAHA 272
IRHV+FGYFSQRTGL+VHIEDSHLTRIQ +GGDAVYWETTI+S +EDYRPVEGIMIAH+
Sbjct: 469 IRHVMFGYFSQRTGLLVHIEDSHLTRIQSTTGGDAVYWETTINSFIEDYRPVEGIMIAHS 528
Query: 273 GRSAVTLFRFGEAAMSHTKTRMEEAWSIEEVAFNVPGLSVDCFIPPADIRSGPVGESCEL 332
GRSAVTLFRFGE AMSHTKTRMEEAWSIEEVAFNVPGLS+DCFIPP DI+SG + E+ EL
Sbjct: 529 GRSAVTLFRFGEVAMSHTKTRMEEAWSIEEVAFNVPGLSMDCFIPPTDIKSGSISETVEL 588
Query: 333 PPPAAAPHGE 342
HGE
Sbjct: 589 ------SHGE 592
>Os12g0581300 Protein of unknown function DUF620 family protein
Length = 158
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 104/129 (80%), Positives = 115/129 (89%), Gaps = 6/129 (4%)
Query: 214 RHVLFGYFSQRTGLIVHIEDSHLTRIQPHSGGDAVYWETTISSALEDYRPVEGIMIAHAG 273
RHVLFGYFSQ+TGL+VH+EDSHLTRIQ +GGDAVYWETTI+S +EDYRPVEGIM+AHAG
Sbjct: 1 RHVLFGYFSQKTGLLVHLEDSHLTRIQSTTGGDAVYWETTINSFIEDYRPVEGIMVAHAG 60
Query: 274 RSAVTLFRFGEAAMSHTKTRMEEAWSIEEVAFNVPGLSVDCFIPPADIRSGPVGESCELP 333
RSAVTLFRFGE AMSHTKTRMEEAWSIEEVAFNVPGLS+DCFIPP DI+SG + E+ EL
Sbjct: 61 RSAVTLFRFGEVAMSHTKTRMEEAWSIEEVAFNVPGLSIDCFIPPTDIKSGSISETVEL- 119
Query: 334 PPAAAPHGE 342
PHGE
Sbjct: 120 -----PHGE 123
>Os03g0267500 Protein of unknown function DUF620 family protein
Length = 441
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 96/166 (57%), Positives = 134/166 (80%), Gaps = 1/166 (0%)
Query: 157 PLLATMQGLDPLTTAGLFAEARCVGEKKVNGEDCFILKLSADPQTLKQRSEGPAEIIRHV 216
PL ++QGLDP+ TA LFA+A C+GE+ V+GEDCF+LK+ A+ +L+ R+ EIIRH
Sbjct: 228 PLRRSLQGLDPMLTASLFADAVCIGERSVDGEDCFVLKVEAEASSLRARNSSSVEIIRHT 287
Query: 217 LFGYFSQRTGLIVHIEDSHLTRIQPHSGGDAVYWETTISSALEDYRPVEGIMIAHAGRSA 276
++GYFSQRTGL+V +EDSHL +I+ SG +V+WETT+ S L DYR V+G+ IAHAGR+A
Sbjct: 288 VWGYFSQRTGLLVQLEDSHLLQIK-SSGHGSVFWETTMESHLHDYRAVDGVNIAHAGRTA 346
Query: 277 VTLFRFGEAAMSHTKTRMEEAWSIEEVAFNVPGLSVDCFIPPADIR 322
V+L RFG+++ +T+TRMEE W+IEEV FN+ GLS+DCF+PP+D++
Sbjct: 347 VSLVRFGDSSDGNTRTRMEEVWNIEEVDFNIWGLSMDCFLPPSDLK 392
>Os05g0252100 Protein of unknown function DUF620 family protein
Length = 488
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 122/177 (68%), Gaps = 12/177 (6%)
Query: 157 PLLATMQGLDPLTTAGLFAEARCVGEKKVNGEDCFILKLSADPQTLKQRSEGPAEIIRHV 216
PL +QGLDP +TA LF+ A VGE+ V+G+DCF+L++ AD L+ RS G E++RH
Sbjct: 215 PLRRCIQGLDPKSTADLFSSAAWVGERCVDGDDCFVLRVDADHAALRARSSGDVEVVRHA 274
Query: 217 LFGYFSQRTGLIVHIEDSHLTRI-QPHSGGDAVYWETTISSALEDYRPVEGIMIAHAGRS 275
+ GYFSQRTGL+V +EDSHL RI H+ ++ YWETT+ S++ DYR V+GI IAHAGR+
Sbjct: 275 VLGYFSQRTGLLVRLEDSHLLRIGLAHAAAESAYWETTMESSIGDYRAVDGINIAHAGRT 334
Query: 276 AVTLFRF-----------GEAAMSHTKTRMEEAWSIEEVAFNVPGLSVDCFIPPADI 321
AV+L RF G S T MEE WSIEEV FNV GLS+DCF+PP D+
Sbjct: 335 AVSLSRFESADDAAAAARGSNKRSWGTTTMEETWSIEEVDFNVVGLSMDCFLPPRDL 391
>Os03g0167400 Protein of unknown function DUF620 family protein
Length = 366
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 120/170 (70%), Gaps = 5/170 (2%)
Query: 157 PLLATMQGLDPLTTAGLFAEARCVGEKKVNGEDCFILKLSADPQTLKQRSEGPAEIIRHV 216
PL +QGLDP+T A +F+ A GEK V+GEDCF+L+L P L S+G AE+IRH
Sbjct: 186 PLRRALQGLDPVTIAAIFSTAEHAGEKLVDGEDCFVLRLDVGPSVLSSWSDGTAEVIRHG 245
Query: 217 LFGYFSQRTGLIVHIEDSHLTRIQPHSGGDAVYWETTISSALEDYRPVE---GIMIAHAG 273
L G+FSQR+GL+V +EDS LTRIQ G A+YWETTISS+L DYR V+ G+ +AH+G
Sbjct: 246 LTGFFSQRSGLLVRLEDSQLTRIQS-PGAAAMYWETTISSSLADYRAVDGGGGVHVAHSG 304
Query: 274 RSAVTLFRFGEAA-MSHTKTRMEEAWSIEEVAFNVPGLSVDCFIPPADIR 322
RS L RFG + TRMEE+W+I++VAFNVPGL D FIPP ++R
Sbjct: 305 RSTAHLARFGVGVRAARVVTRMEESWTIDDVAFNVPGLGPDAFIPPEEVR 354
>Os10g0411000
Length = 220
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 112/165 (67%), Gaps = 2/165 (1%)
Query: 158 LLATMQGLDPLTTAGLFAEARCVGEKKVNGEDCFILKLSADPQTLKQRSEGPAEIIRHVL 217
+L + GLDP+T A +F+ A VGEK V+GEDCF L+L P L +G AE+IRH +
Sbjct: 33 VLTIVHGLDPVTIASVFSAAEHVGEKAVDGEDCFALRLDVAPSVLSAWGDGAAEVIRHGM 92
Query: 218 FGYFSQRTGLIVHIEDSHLTRIQPHSGGDAVYWETTISSALEDYRPVEGIMIAHAGRSAV 277
GYFSQR+GL+ ++DS LTRIQ G A+YWETT+SS L DYR +G ++AHAG S
Sbjct: 93 TGYFSQRSGLLARLDDSQLTRIQT-PGAPAMYWETTVSSRLGDYRAADGAVVAHAGTSVA 151
Query: 278 TLFRFG-EAAMSHTKTRMEEAWSIEEVAFNVPGLSVDCFIPPADI 321
L RFG + + TRMEEAW+I++VAFNV GL + FI P ++
Sbjct: 152 HLARFGADVGAARAVTRMEEAWTIDDVAFNVAGLCPESFIAPEEV 196
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,831,260
Number of extensions: 381009
Number of successful extensions: 865
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 855
Number of HSP's successfully gapped: 7
Length of query: 380
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 277
Effective length of database: 11,657,759
Effective search space: 3229199243
Effective search space used: 3229199243
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)