Os03g0267500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF620 family protein.
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Os03g0267500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF620 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.77 | 0.567 | 10.1 | -0.648 | 1.11 | -0.826 | -1.79 | -5.2 | -0.244 | 4.78 | 21.3 | 273 | -- | -- |
| 158.2 | 0.586 | 9.97 | 0.29 | 0.969 | -1.15 | -0.532 | -- | -0.0032 | 4.6 | 24.1 | 266 | -- | -- |
| 151.61 | 0.573 | 10 | -0.343 | 1.1 | -0.861 | -- | -3.72 | -0.17 | 4.92 | 21.89 | 264 | -- | -- |
| 157.29 | 0.584 | 9.96 | 0.33 | 0.972 | -1.33 | -- | -- | 0.00508 | 5.45 | 24.04 | 142 | -- | -- |
| 185.69 | 0.635 | 9.99 | 0.282 | -- | -1.95 | -- | -1.15 | 0.033 | -- | 24.36 | 262 | -- | -- |
| 186.06 | 0.639 | 9.99 | 0.0798 | 1.52 | -- | -0.017 | -- | -0.152 | 4.92 | -- | -- | -- | -- |
| 186.06 | 0.639 | 9.99 | 0.0799 | 1.52 | -- | -- | -- | -0.152 | 4.92 | -- | -- | -- | -- |
| 185.61 | 0.635 | 9.96 | 0.471 | -- | -2.09 | -- | -- | 0.0859 | -- | 24.3 | 246 | -- | -- |
| 159.75 | 0.589 | 9.97 | -- | 1.01 | -1.24 | -- | -- | -0.043 | 5.37 | 24.16 | 138 | -- | -- |
| 308.49 | 0.821 | 10 | 0.136 | -- | -- | -- | -- | -0.113 | -- | -- | -- | -- | -- |
| 186.23 | 0.638 | 9.99 | -- | 1.53 | -- | -- | -- | -0.161 | 4.92 | -- | -- | -- | -- |
| 191.32 | 0.644 | 9.98 | -- | -- | -2.02 | -- | -- | 0.026 | -- | 24.32 | 247 | -- | -- |
| 308.97 | 0.82 | 10 | -- | -- | -- | -- | -- | -0.128 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.04 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 38 | 146.96 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 42 | 147.28 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 44 | 147.29 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 74 | 148.74 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 78 | 148.90 | temperature | 20 | 10 | > th | dose dependent | sin | 15 | NA |
| 95 | 149.66 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 111 | 150.11 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 119 | 150.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 127 | 150.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 128 | 150.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 137 | 150.83 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 140 | 150.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 14 |
| 168 | 151.25 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 11 |
| 175 | 151.36 | temperature | 10 | 10 | > th | dose dependent | sin | 19 | NA |
| 176 | 151.36 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 16 |
| 185 | 151.47 | temperature | 30 | 90 | < th | dose dependent | sin | 21 | NA |
| 205 | 151.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 11 |
| 206 | 151.66 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 20 |
| 218 | 151.75 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 233 | 151.86 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 239 | 151.91 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 268 | 152.12 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 301 | 152.30 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 2 |
| 344 | 152.52 | temperature | 20 | 1440 | > th | dose dependent | sin | 9 | NA |
| 351 | 152.57 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 5 |
| 383 | 152.74 | temperature | 25 | 4320 | < th | dose independent | sin | 13 | NA |
| 416 | 152.88 | temperature | 30 | 10 | < th | dose dependent | sin | 20 | NA |
| 421 | 152.90 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 457 | 153.05 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 472 | 153.13 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 18 |
| 479 | 153.16 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 484 | 153.18 | temperature | 20 | 270 | > th | dose dependent | sin | 21 | NA |
| 500 | 153.25 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 563 | 153.48 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 566 | 153.48 | temperature | 20 | 720 | > th | dose dependent | sin | 3 | NA |
| 568 | 153.49 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 584 | 153.57 | temperature | 25 | 4320 | > th | dose independent | sin | 14 | NA |
| 621 | 153.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 14 |
| 674 | 153.88 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 709 | 154.00 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 10 |
| 710 | 154.00 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 711 | 154.01 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 18 |
| 712 | 154.01 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 727 | 154.04 | radiation | 1 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 751 | 154.12 | radiation | 1 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 787 | 154.24 | temperature | 25 | 270 | > th | dose independent | sin | 17 | NA |
| 789 | 154.24 | radiation | 40 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 811 | 154.33 | temperature | 10 | 720 | > th | dose dependent | sin | 2 | NA |
| 819 | 154.35 | radiation | 10 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 852 | 154.39 | radiation | 40 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 877 | 154.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 14 |
| 917 | 154.52 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 22 |
| 944 | 154.57 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 2 |