BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0811000 Os02g0811000|AK111446
(248 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0811000 Protein of unknown function DUF640 domain cont... 253 7e-68
Os10g0478000 Protein of unknown function DUF640 domain cont... 224 5e-59
Os02g0623400 Protein of unknown function DUF640 domain cont... 223 7e-59
Os06g0672400 Protein of unknown function DUF640 domain cont... 219 2e-57
Os02g0166800 Protein of unknown function DUF640 domain cont... 217 8e-57
Os01g0828900 216 2e-56
Os04g0516200 Protein of unknown function DUF640 domain cont... 215 2e-56
Os05g0472000 209 1e-54
Os05g0347400 Protein of unknown function DUF640 domain cont... 206 1e-53
Os07g0139300 151 5e-37
>Os02g0811000 Protein of unknown function DUF640 domain containing protein
Length = 248
Score = 253 bits (647), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 134/210 (63%)
Query: 1 MDRXXXXXXXXXXXMMSXXXXXXXXXXXXXXXXTQDSFFLXXXXXXXXXXXXXXXXXXXX 60
MDR MMS TQDSFFL
Sbjct: 1 MDRHHHHHHHHHHHMMSGGGQDPAAGDGGAGGATQDSFFLGPAAAAMFSGAGSSSSGAGT 60
Query: 61 XXXXXXXXXXXXXXXXXXXRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYM 120
RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYM
Sbjct: 61 SAGGGGGGPSPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYM 120
Query: 121 DQFGKTKVHTPVCPFYGHXXXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFG 180
DQFGKTKVHTPVCPFYGH LRQAWGSLDALIGRLRAAYEENGGTPEMNPFG
Sbjct: 121 DQFGKTKVHTPVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGTPEMNPFG 180
Query: 181 ARAVRLYLREVRETQARARGISYEKKKRKK 210
ARAVRLYLREVRETQARARGISYEKKKRKK
Sbjct: 181 ARAVRLYLREVRETQARARGISYEKKKRKK 210
>Os10g0478000 Protein of unknown function DUF640 domain containing protein
Length = 204
Score = 224 bits (570), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 104/125 (83%), Positives = 110/125 (88%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYESQKRRDWNTFGQYLRNHRPPLSL+RCSGAHVLEFL+Y+DQFGKTKVH P CPF+GH
Sbjct: 40 RYESQKRRDWNTFGQYLRNHRPPLSLARCSGAHVLEFLRYLDQFGKTKVHAPACPFFGHP 99
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
LRQAWGSLDAL+GRLRAAYEENGG PE NPFGARAVRLYLREVRE QARAR
Sbjct: 100 APPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPENNPFGARAVRLYLREVREHQARAR 159
Query: 200 GISYE 204
G+SYE
Sbjct: 160 GVSYE 164
>Os02g0623400 Protein of unknown function DUF640 domain containing protein
Length = 232
Score = 223 bits (569), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 104/131 (79%), Positives = 113/131 (86%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYE+QKRRDWNTFGQYLRNHRPPL L++CSGAHVLEFL+Y+DQFGKTKVHT CPF+GH
Sbjct: 73 RYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAACPFFGHP 132
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
LRQAWGSLDAL+GRLRAA+EENGG PE NPF RAVRLYLREVRE QARAR
Sbjct: 133 NPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVREHQARAR 192
Query: 200 GISYEKKKRKK 210
G+SYEKKKRKK
Sbjct: 193 GVSYEKKKRKK 203
>Os06g0672400 Protein of unknown function DUF640 domain containing protein
Length = 277
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/131 (77%), Positives = 115/131 (87%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYESQKRRDW+TFGQYLRNHRPPL LSRCSGAHVLEFL+Y+DQFGKTKVH CPF+GH
Sbjct: 22 RYESQKRRDWHTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAAGCPFFGHP 81
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
LRQAWGSLDAL+GRLRAA+EE+GG PE NPFGARAVRLYLREVR++QA+AR
Sbjct: 82 SPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPEANPFGARAVRLYLREVRDSQAKAR 141
Query: 200 GISYEKKKRKK 210
GI+YEKK+RK+
Sbjct: 142 GIAYEKKRRKR 152
>Os02g0166800 Protein of unknown function DUF640 domain containing protein
Length = 191
Score = 217 bits (552), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 100/131 (76%), Positives = 114/131 (87%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYESQKRRDW TFGQYLRNHRPPL LSRCSGAHVLEFL+Y+DQFGKTKVH CPF+GH
Sbjct: 23 RYESQKRRDWQTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAHGCPFFGHP 82
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
LRQAWGSLDAL+GRLRAA+EE+GG PE NPFGARAVRLYLR++R+TQ++AR
Sbjct: 83 SPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPESNPFGARAVRLYLRDIRDTQSKAR 142
Query: 200 GISYEKKKRKK 210
GI+YEKK+RK+
Sbjct: 143 GIAYEKKRRKR 153
>Os01g0828900
Length = 212
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/131 (77%), Positives = 112/131 (85%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYESQKRRDWNTF QYLRNHRPPL+L+RCSGAHV+EFL+Y+DQFGKTKVH C FYG
Sbjct: 31 RYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVIEFLRYLDQFGKTKVHASGCAFYGQP 90
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
LRQAWGSLDALIGRLRAAYEE+GGTPE NPF ARAVR+YLREVR++QA+AR
Sbjct: 91 SPPGPCPCPLRQAWGSLDALIGRLRAAYEESGGTPESNPFAARAVRIYLREVRDSQAKAR 150
Query: 200 GISYEKKKRKK 210
GI YEKKKRK+
Sbjct: 151 GIPYEKKKRKR 161
>Os04g0516200 Protein of unknown function DUF640 domain containing protein
Length = 202
Score = 215 bits (548), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/125 (80%), Positives = 109/125 (87%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYE+QKRRDWNTFGQYLRNHRPPLSL++CSGAHVLEFL+Y+DQFGKTKVHT CPF+GH
Sbjct: 41 RYEAQKRRDWNTFGQYLRNHRPPLSLAQCSGAHVLEFLRYLDQFGKTKVHTAACPFFGHP 100
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
LRQAWGSLDAL+GRLRAA+EENGG PE NPF ARAVRLYLREVRE QARAR
Sbjct: 101 SPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNPFAARAVRLYLREVREHQARAR 160
Query: 200 GISYE 204
G+SYE
Sbjct: 161 GVSYE 165
>Os05g0472000
Length = 238
Score = 209 bits (532), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/131 (74%), Positives = 109/131 (83%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYESQKRRDWNTF QYL+NHRPPL+L+RCSGAHV+EFLKY+DQFGKTKVH C +YG
Sbjct: 30 RYESQKRRDWNTFLQYLKNHRPPLTLARCSGAHVIEFLKYLDQFGKTKVHASGCAYYGQP 89
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
LRQAWGSLDALIGRLRAAYEE+G PE NPF ARAVR+YLREVR+ QA+AR
Sbjct: 90 SPPAPCPCPLRQAWGSLDALIGRLRAAYEESGHAPESNPFAARAVRIYLREVRDAQAKAR 149
Query: 200 GISYEKKKRKK 210
GI YEKKKRK+
Sbjct: 150 GIPYEKKKRKR 160
>Os05g0347400 Protein of unknown function DUF640 domain containing protein
Length = 284
Score = 206 bits (524), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 108/130 (83%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYESQKRRDWNTF QYLRNH+PPL+L RCSGAHV+EFLKY+DQFGKTKVH C ++G
Sbjct: 67 RYESQKRRDWNTFLQYLRNHKPPLTLPRCSGAHVIEFLKYLDQFGKTKVHADGCAYFGEP 126
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
LRQAWGSLDALIGRLRAAYEE+GG PE NPF ARAVR+YLREVRE QA+AR
Sbjct: 127 NPPAPCACPLRQAWGSLDALIGRLRAAYEESGGRPESNPFAARAVRIYLREVREAQAKAR 186
Query: 200 GISYEKKKRK 209
GI YEKK+++
Sbjct: 187 GIPYEKKRKR 196
>Os07g0139300
Length = 293
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 103/163 (63%), Gaps = 32/163 (19%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYG-- 137
RYESQKRRDW TF QYL HRPPL L RCSGAHVLEFL+Y+D+FGKT+VH P CP YG
Sbjct: 41 RYESQKRRDWQTFTQYLAAHRPPLELRRCSGAHVLEFLRYLDRFGKTRVHEPPCPSYGGR 100
Query: 138 -------HXXXXXXXXXXLRQAWGSLDALIGRLRAAYEE---NGGTPE------------ 175
LRQAWGSLDAL+GRLRAAY+E G P+
Sbjct: 101 SPSAAGPVAAAAAACQCPLRQAWGSLDALVGRLRAAYDERHGRAGEPDAVAGAGAVATDS 160
Query: 176 --------MNPFGARAVRLYLREVRETQARARGISYEKKKRKK 210
NPF ARAVRLYLR+VR+ QA ARGISY KKK+++
Sbjct: 161 TSSSSAAAANPFAARAVRLYLRDVRDAQAMARGISYHKKKKRR 203
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.138 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,749,095
Number of extensions: 156383
Number of successful extensions: 352
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 350
Number of HSP's successfully gapped: 10
Length of query: 248
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 150
Effective length of database: 11,918,829
Effective search space: 1787824350
Effective search space used: 1787824350
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 155 (64.3 bits)