Os10g0478000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF640 domain containing protein.
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Os10g0478000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF640 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.93 | 0.544 | 3.49 | -0.268 | 0.796 | -1.17 | -2.71 | 3.84 | 0.482 | 14 | 20.8 | 10 | -- | -- |
| 141.9 | 0.559 | 3.56 | -0.902 | 0.769 | -1.25 | -1.65 | -- | 0.299 | 13.9 | 13.36 | 12 | -- | -- |
| 150.95 | 0.572 | 3.53 | -0.68 | 0.885 | -1.35 | -- | 2.92 | 0.333 | 14.3 | 24.57 | 12 | -- | -- |
| 152.09 | 0.574 | 3.57 | -0.933 | 0.795 | -1.3 | -- | -- | 0.304 | 13.9 | 15.3 | 9 | -- | -- |
| 177.53 | 0.621 | 3.6 | -1.01 | -- | -0.84 | -- | 3.99 | 0.0988 | -- | 29.22 | 9 | -- | -- |
| 156.98 | 0.587 | 3.6 | -1.14 | 0.415 | -- | -1.81 | -- | 0.124 | 13.9 | -- | -- | -- | -- |
| 169.53 | 0.61 | 3.61 | -1.19 | 0.412 | -- | -- | -- | 0.113 | 13.6 | -- | -- | -- | -- |
| 177.53 | 0.623 | 3.6 | -1.14 | -- | -0.397 | -- | -- | 0.158 | -- | 15.3 | 9 | -- | -- |
| 172.82 | 0.612 | 3.53 | -- | 0.937 | -1.74 | -- | -- | 0.462 | 14 | 15.2 | 12 | -- | -- |
| 179.94 | 0.627 | 3.61 | -1.21 | -- | -- | -- | -- | 0.104 | -- | -- | -- | -- | -- |
| 207.15 | 0.673 | 3.58 | -- | 0.434 | -- | -- | -- | 0.246 | 13.6 | -- | -- | -- | -- |
| 209.45 | 0.674 | 3.56 | -- | -- | -0.753 | -- | -- | 0.326 | -- | 15.2 | 19 | -- | -- |
| 218.64 | 0.69 | 3.58 | -- | -- | -- | -- | -- | 0.238 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.34 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 5 |
| 3 | 120.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 6 | 120.78 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 10 |
| 58 | 122.56 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 17 |
| 63 | 122.74 | temperature | 15 | 720 | > th | dose dependent | sin | 5 | NA |
| 65 | 122.76 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 69 | 122.89 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 121 | 123.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 130 | 123.95 | temperature | 15 | 30 | > th | dose dependent | rect. | 3 | 22 |
| 182 | 124.72 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 227 | 125.19 | temperature | 20 | 30 | > th | dose dependent | rect. | 8 | 14 |
| 237 | 125.29 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 11 |
| 261 | 125.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 287 | 125.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 9 |
| 304 | 125.94 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 7 |
| 305 | 125.94 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 8 |
| 322 | 126.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 8 |
| 323 | 126.11 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 9 |
| 418 | 126.81 | temperature | 15 | 270 | > th | dose dependent | sin | 1 | NA |
| 612 | 128.32 | temperature | 30 | 10 | < th | dose dependent | sin | 23 | NA |
| 625 | 128.46 | temperature | 10 | 10 | > th | dose dependent | sin | 23 | NA |
| 647 | 128.55 | temperature | 20 | 720 | > th | dose independent | sin | 4 | NA |
| 650 | 128.58 | temperature | 20 | 720 | < th | dose independent | sin | 4 | NA |
| 693 | 128.78 | temperature | 20 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 733 | 128.96 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 10 |
| 804 | 129.37 | temperature | 20 | 30 | > th | dose dependent | rect. | 8 | 17 |