BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0766900 Os02g0766900|Os02g0766900
(407 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0766900 Similar to (1-4)-beta-mannan endohydrolase pre... 797 0.0
Os01g0663300 Similar to (1-4)-beta-mannan endohydrolase-lik... 419 e-117
Os03g0828500 Similar to (1-4)-beta-mannan endohydrolase pre... 404 e-113
Os01g0746700 Glycoside hydrolase, family 5 protein 345 4e-95
Os05g0319100 329 2e-90
Os12g0117250 Glycoside hydrolase, family 5 protein 329 2e-90
Os11g0118200 Hypothetical protein 202 3e-52
Os03g0828300 Similar to (1-4)-beta-mannan endohydrolase-lik... 174 8e-44
Os06g0311600 Conserved hypothetical protein 79 8e-15
>Os02g0766900 Similar to (1-4)-beta-mannan endohydrolase precursor (EC 3.2.1.78)
Length = 407
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/407 (95%), Positives = 387/407 (95%)
Query: 1 MGSKRRVILLPTXXXXXXXXXXXXXXXXXXXXDVANGQFARASGTRFTVGGRPFYSNGFN 60
MGSKRRVILLPT DVANGQFARASGTRFTVGGRPFYSNGFN
Sbjct: 1 MGSKRRVILLPTLGVVVLAIAAAVLLHAGEAADVANGQFARASGTRFTVGGRPFYSNGFN 60
Query: 61 AYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFSDGGYRPLQKSPGVYNEDMFMGL 120
AYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFSDGGYRPLQKSPGVYNEDMFMGL
Sbjct: 61 AYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFSDGGYRPLQKSPGVYNEDMFMGL 120
Query: 121 DFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARDQGHNLGSDDDFFRSDVTKQFYKN 180
DFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARDQGHNLGSDDDFFRSDVTKQFYKN
Sbjct: 121 DFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARDQGHNLGSDDDFFRSDVTKQFYKN 180
Query: 181 HAVLTRVNKITGVAYKDDPTIFAWELINEPRCQSDLSGKTLQAWVTEMAGYVKSVDPNHM 240
HAVLTRVNKITGVAYKDDPTIFAWELINEPRCQSDLSGKTLQAWVTEMAGYVKSVDPNHM
Sbjct: 181 HAVLTRVNKITGVAYKDDPTIFAWELINEPRCQSDLSGKTLQAWVTEMAGYVKSVDPNHM 240
Query: 241 VEIGLEGFYGESMHKNFNPGYTVGTDFIANNLVPAVDFATIHSYPDQWVSGASSDEQVAF 300
VEIGLEGFYGESMHKNFNPGYTVGTDFIANNLVPAVDFATIHSYPDQWVSGASSDEQVAF
Sbjct: 241 VEIGLEGFYGESMHKNFNPGYTVGTDFIANNLVPAVDFATIHSYPDQWVSGASSDEQVAF 300
Query: 301 MRKWMADHIRDSAAVLRKPLLVTEFGWSARSNGYTVAARDAYFRTVYDAVYASAREGGAC 360
MRKWMADHIRDSAAVLRKPLLVTEFGWSARSNGYTVAARDAYFRTVYDAVYASAREGGAC
Sbjct: 301 MRKWMADHIRDSAAVLRKPLLVTEFGWSARSNGYTVAARDAYFRTVYDAVYASAREGGAC 360
Query: 361 AGGLFWQVMAPGMESWTDGYEVVLERSKSTADVVAHQCARIAGLSPA 407
AGGLFWQVMAPGMESWTDGYEVVLERSKSTADVVAHQCARIAGLSPA
Sbjct: 361 AGGLFWQVMAPGMESWTDGYEVVLERSKSTADVVAHQCARIAGLSPA 407
>Os01g0663300 Similar to (1-4)-beta-mannan endohydrolase-like protein
Length = 403
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/376 (55%), Positives = 255/376 (67%), Gaps = 36/376 (9%)
Query: 39 FARASGTRFTVGGRPFYSNGFNAYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFS 98
F RA GTRF + G P+Y+NGFNAYWLM +A+DP R K + L +AA T+ RTWAFS
Sbjct: 37 FVRAQGTRFVLDGNPYYANGFNAYWLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFS 96
Query: 99 DGGY-RPLQKSPGVYNEDMFMGLDFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARD 157
DGG LQ SPG YNE+ F GLDFV++EA+K G+ +ILSLV+N+D FGG+KQYV WAR
Sbjct: 97 DGGGGNALQLSPGNYNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARA 156
Query: 158 QGHNLGSDDDFFRSDVTKQFYKNH--AVLTRVNKITGVAYKDDPTIFAWELINEPRCQSD 215
QG +GSDD+FF + V K FYKNH VLTR N ITGVAY+DDPTI AWEL+NEPRCQSD
Sbjct: 157 QGQGIGSDDEFFTNPVVKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSD 216
Query: 216 LSGKTLQAWVTEMAGYVKSVDPNHMVEIGLEGFYGESMHKNF---NP-GYTVGTDFIANN 271
LSG+T+Q+W+TEMA +VKS+D NHM+E+GLEGFYG S NP GY +GTDFIANN
Sbjct: 217 LSGRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSGYQLGTDFIANN 276
Query: 272 LVPAVDFATIHSYPDQWVSGASSDEQVAFMRKWMADHIRDSAAVLRKPLLVTEFGWSARS 331
VP +DFAT+HSYPDQW+SG Q+ FM +W+ HI
Sbjct: 277 QVPGIDFATVHSYPDQWLSGKDDQAQLGFMGRWLDAHI---------------------- 314
Query: 332 NGYTVAARDAYFRTVYDAVYASAREGGACAGGLFWQVMAPGMESWTDGYEVVLERSKSTA 391
DA + TVY +Y SAR GGA GGLFWQ++ PGM+S+ DGYEVV + ST
Sbjct: 315 -------ADALYGTVYAKIYESARRGGATVGGLFWQLLVPGMDSYRDGYEVVFGETPSTT 367
Query: 392 DVVAHQCARIAGLSPA 407
V+ R+ LS A
Sbjct: 368 GVITTNSRRLRFLSKA 383
>Os03g0828500 Similar to (1-4)-beta-mannan endohydrolase precursor (EC 3.2.1.78)
Length = 461
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/374 (55%), Positives = 253/374 (67%), Gaps = 12/374 (3%)
Query: 44 GTRFTV-GGRPFYSNGFNAYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFSDGGY 102
GT+F V GR + +GFNAYWLM MA+DP R A QQA++ L RTWAFSDGG
Sbjct: 28 GTQFVVDCGRTIFFSGFNAYWLMMMAADPALRGAVATAFQQASAHGLNLARTWAFSDGGD 87
Query: 103 RPLQKSPGVYNEDMFMGLDFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARDQGHNL 162
+PLQ SPGVYNE MF GLDFVIAEA++ G+YL+L L NN+D FGGK+QYV+WA D GHNL
Sbjct: 88 QPLQSSPGVYNETMFQGLDFVIAEARRHGIYLLLCLTNNFDNFGGKRQYVRWAGDAGHNL 147
Query: 163 GSDDDFFRSDVTKQFYKNHA--VLTRVNKITGVAYKDDPTIFAWELINEPRCQSDLSGKT 220
SDDDFF S + K ++KNH VLTRVN +TGVAYKDDPTIFAWEL+NEPRC +D +G
Sbjct: 148 TSDDDFFTSTIVKSYFKNHVKTVLTRVNTLTGVAYKDDPTIFAWELMNEPRCYADPTGAM 207
Query: 221 LQAWVTEMAGYVKSVDPNHMVEIGLEGFYGESMH--KNFNP-GYTVGTDFIANNLVPAVD 277
+QAWV EMA YVKSVD H+V GLEGFYG H K NP G GT+++A + AVD
Sbjct: 208 VQAWVEEMAPYVKSVDGRHLVTPGLEGFYGAGEHESKELNPWGIYYGTNYVATHRTAAVD 267
Query: 278 FATIHSYPDQWVSGASSDEQVAFMRKWMADHIRDSAAVLRKPLLVTEFG-WSARSNGYTV 336
FATIH YPD W+ G+S+DEQ F R W HI +AA L PLLVTE+G + + G
Sbjct: 268 FATIHLYPDVWLWGSSADEQATFFRNWTRSHIDATAAYLGMPLLVTEYGKFLWKEVGANK 327
Query: 337 AARDAYFRTVYDAVYASAREGGACAGGLFWQVM-----APGMESWTDGYEVVLERSKSTA 391
A R+ + V DA+YASA GG GG FWQ++ GM+S DGYE++L A
Sbjct: 328 AQRNYFLDLVLDAIYASASRGGPLVGGAFWQLLLDGDIVAGMDSLRDGYEIILAEDSRAA 387
Query: 392 DVVAHQCARIAGLS 405
++ ++A L+
Sbjct: 388 SIIGEHSEQLAALN 401
>Os01g0746700 Glycoside hydrolase, family 5 protein
Length = 445
Score = 345 bits (885), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 174/376 (46%), Positives = 239/376 (63%), Gaps = 10/376 (2%)
Query: 39 FARASGTRFTVGGRPFYSNGFNAYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFS 98
F G R + GRPFY NG+N+YWLM +A +P R + + + + A S+ T+ RTWAF+
Sbjct: 54 FVERRGKRLFLDGRPFYINGWNSYWLMDLAVEPNTRPRVSSMFRTAVSMGLTVCRTWAFN 113
Query: 99 DGGYRPLQKSPGVYNEDMFMGLDFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARDQ 158
DG Y LQ SPG ++E +F LD V+AEA + G+ LILSL NN D +GGK+QYV+WA ++
Sbjct: 114 DGSYNALQLSPGHFDERVFKALDRVVAEASEHGVRLILSLANNLDAYGGKRQYVRWAWEE 173
Query: 159 GHNL-GSDDDFFRSDVTKQFYKNH--AVLTRVNKITGVAYKDDPTIFAWELINEPRCQSD 215
G L S+D FF + ++K + +L R N +TG+ Y+DDPTI AWEL+NEPRC SD
Sbjct: 174 GVGLTASNDSFFFDPAIRDYFKVYLKTLLMRKNHLTGLEYRDDPTILAWELMNEPRCTSD 233
Query: 216 LSGKTLQAWVTEMAGYVKSVDPNHMVEIGLEGFYGESMHK---NFNPGY----TVGTDFI 268
SG TLQ W+ EM+ YVKS+D H++ +G EGFYG + + N NPG G DFI
Sbjct: 234 PSGDTLQRWMEEMSAYVKSIDKKHLLTVGTEGFYGPTSSQEKLNINPGEWFPNNYGADFI 293
Query: 269 ANNLVPAVDFATIHSYPDQWVSGASSDEQVAFMRKWMADHIRDSAAVLRKPLLVTEFGWS 328
N+ + +DFA++H YPD W+ AS DE++ FM +W+ H+ D L KP+LVTEFG S
Sbjct: 294 RNSKIQDIDFASVHVYPDNWLQHASLDEKLKFMTRWITAHVEDGDGELEKPVLVTEFGLS 353
Query: 329 ARSNGYTVAARDAYFRTVYDAVYASAREGGACAGGLFWQVMAPGMESWTDGYEVVLERSK 388
+ G+ A RD +R VYD V+ SAR GGA G L WQ+ A GME + DG+ +V
Sbjct: 354 HQVEGFEDAHRDVLYRAVYDIVHGSARRGGAAGGALVWQLAAEGMEEYHDGFSIVPSERP 413
Query: 389 STADVVAHQCARIAGL 404
S ++ Q R+A +
Sbjct: 414 SMMRLIKEQSCRLAAV 429
>Os05g0319100
Length = 491
Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/359 (50%), Positives = 232/359 (64%), Gaps = 14/359 (3%)
Query: 41 RASGTRFTVGG-RPFYSNGFNAYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFSD 99
R G +F VGG RPFY NGFN YWLM +A DP R K V +QAA++ T+ RTWAF+D
Sbjct: 79 RTRGAQFVVGGGRPFYVNGFNTYWLMVLAVDPSTRGKVTEVFRQAAAVGLTVCRTWAFND 138
Query: 100 GGYRPLQKSPGVYNEDMFMGLDFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARDQG 159
GG+R LQKSPGVY+E++F LDFV++EA+K + LIL L+NNWD +GGK QYV+WA+
Sbjct: 139 GGWRALQKSPGVYDEEVFKALDFVVSEARKHKIRLILPLINNWDDYGGKAQYVRWAQ-AA 197
Query: 160 HNLGSDDDFFRSDVTKQFYKNH--AVLTRVNKITGVAYKDDPTIFAWELINEPRCQSDLS 217
D FF + + ++K+H AVLTRVN TGVAY+DDPTI AWEL+NEPRC SD +
Sbjct: 198 AAGAGADAFFSDETVRGYFKSHVTAVLTRVNAYTGVAYRDDPTIMAWELMNEPRCASDPT 257
Query: 218 GKTLQAWVTEMAGYVKSVDPNHMVEIGLEGFYGES---MHKNFNPGYTV---GTDFIANN 271
G TLQAW+ EMA +VKSVDP H++ +G EGFYG S NP V G DF+ N+
Sbjct: 258 GDTLQAWIAEMAFHVKSVDPAHLLGVGAEGFYGPSSPPARLRVNPNADVALAGADFVRNH 317
Query: 272 LVPAVDFATIHSYPDQWV-SGASSDEQVAFMRKWMADHIRDSAAVL-RKPLLVTEFGWSA 329
V VDFA++H YPD W+ +GA+ + Q+ F W+ HI D+ L P+L EFG S
Sbjct: 318 RVLGVDFASVHVYPDTWLPAGATKEAQLRFATSWVEAHIADAEGALGGMPVLFAEFGVST 377
Query: 330 RS--NGYTVAARDAYFRTVYDAVYASAREGGACAGGLFWQVMAPGMESWTDGYEVVLER 386
R + +RDA+ VY A+ S R GG AG L WQV G + DGY VVL R
Sbjct: 378 RGARAAFNATSRDAFIEAVYGAMLRSTRRGGGGAGALLWQVFPEGTDYMDDGYAVVLPR 436
>Os12g0117250 Glycoside hydrolase, family 5 protein
Length = 360
Score = 329 bits (843), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 166/346 (47%), Positives = 217/346 (62%), Gaps = 7/346 (2%)
Query: 40 ARASGTRFTVGGRPFYSNGFNAYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFSD 99
SGT+ GRPF +GFN YWLM A+D R + + +AA + RTWAFSD
Sbjct: 12 VECSGTQLWASGRPFIIHGFNTYWLMSFAADQATRPRVTAAIAEAAEAGLNVCRTWAFSD 71
Query: 100 GGYRPLQKSPGVYNEDMFMGLDFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARDQG 159
GGYR LQ P Y+ED+F LDFV++EAK+ + LILSL NNW+ +GGK QYV+W ++ G
Sbjct: 72 GGYRALQTVPFHYDEDVFQALDFVVSEAKRHNMRLILSLCNNWEDYGGKAQYVRWGKEAG 131
Query: 160 HNLGSDDDFFRSDVTKQFYKN--HAVLTRVNKITGVAYKDDPTIFAWELINEPRCQSDLS 217
+L S+DDFF K +YK AV+TR+N +T YKDDPTI AWELINEPRC SD S
Sbjct: 132 LDLTSEDDFFSDPTIKSYYKAFVEAVVTRINTVTNETYKDDPTILAWELINEPRCPSDPS 191
Query: 218 GKTLQAWVTEMAGYVKSVDPNHMVEIGLEGFYGESMHKNF--NPG-YT--VGTDFIANNL 272
G TLQAW+ EMA YVKS+DP H++EIG+EGFYG S + NP Y+ GTDFI N+
Sbjct: 192 GDTLQAWIEEMASYVKSIDPVHLLEIGIEGFYGLSTPELLPVNPDEYSGHAGTDFIRNHQ 251
Query: 273 VPAVDFATIHSYPDQWVSGASSDEQVAFMRKWMADHIRDSAAVLRKPLLVTEFGWSARSN 332
P +D A+IH Y D W+ + + + F+ KWM HI D+A +L P++V EFG S +
Sbjct: 252 APGIDLASIHVYSDTWLPHSIKENHLQFVDKWMQQHIHDAANLLGMPIVVGEFGVSVKDG 311
Query: 333 GYTVAARDAYFRTVYDAVYASAREGGACAGGLFWQVMAPGMESWTD 378
+ R+ + +TVY +S +EG G L WQ+ G E D
Sbjct: 312 KFGNEFREDFMKTVYRIFLSSWKEGVIGGGCLLWQLFPEGAEHMDD 357
>Os11g0118200 Hypothetical protein
Length = 202
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 124/185 (67%), Gaps = 5/185 (2%)
Query: 44 GTRFTVGGRPFYSNGFNAYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFSDGGYR 103
GT+ GRPF +GFN YWLM A+D R + + +A + TWAFSDGGYR
Sbjct: 16 GTQLWASGRPFIIHGFNTYWLMSFAADQATRLRVTAAIAEAG---LNVCCTWAFSDGGYR 72
Query: 104 PLQKSPGVYNEDMFMGLDFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARDQGHNLG 163
LQ +P Y+ED+F LDFV++EA++ + LILSL NNW+ +GGK QYV+W ++ G +L
Sbjct: 73 ALQTAPFHYDEDVFRALDFVVSEARRHNMRLILSLCNNWEDYGGKAQYVRWGKEAGLDLT 132
Query: 164 SDDDFFRSDVTKQFYKN--HAVLTRVNKITGVAYKDDPTIFAWELINEPRCQSDLSGKTL 221
S+DDFF K +YK AV+TR+N +T YKDDPTI AWELINEPRC SD SG TL
Sbjct: 133 SEDDFFSDPTIKSYYKAFVEAVVTRINTVTNETYKDDPTILAWELINEPRCPSDPSGDTL 192
Query: 222 QAWVT 226
Q ++T
Sbjct: 193 QVFIT 197
>Os03g0828300 Similar to (1-4)-beta-mannan endohydrolase-like protein
Length = 189
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 107/147 (72%), Gaps = 2/147 (1%)
Query: 44 GTRFTV-GGRPFYSNGFNAYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFSDGGY 102
GT+F V GGR Y +GFNAYWLM MASDP R+ QA+S L RTWAFSDGG
Sbjct: 37 GTQFVVEGGRTIYFSGFNAYWLMMMASDPARRAAVVAAFAQASSRGLNLARTWAFSDGGD 96
Query: 103 RPLQKSPGVYNEDMFMGLDFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARDQGHNL 162
+PLQ SPGVY+E MF GLDFVIAEA++ G+YL+L L NN+D FGGK+QYV+WA D GHNL
Sbjct: 97 QPLQSSPGVYDEAMFQGLDFVIAEARRHGIYLLLCLTNNFDDFGGKRQYVRWAADAGHNL 156
Query: 163 GSDDDFFRSDVTKQFYKNHAVLTRVNK 189
+ DDFF S V K +YKNH V R N+
Sbjct: 157 TAGDDFFTSSVVKSYYKNH-VKVRHNR 182
>Os06g0311600 Conserved hypothetical protein
Length = 119
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 222 QAWVTEMAGYVKSVDPNHMVEIGLEGFYGESMHKNF--NPGY---TVGTDFIANNLVPAV 276
QAW+ EMA YVKS+D NH+V +G EGFYG + + NPG ++ +DFI N+ V +
Sbjct: 1 QAWIAEMAAYVKSLDTNHLVTVGTEGFYGPGIAERLGVNPGEWAASLCSDFIQNSAVEHI 60
Query: 277 DFATIHSYPDQW 288
DFA++H+YPD W
Sbjct: 61 DFASVHAYPDSW 72
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,216,250
Number of extensions: 601739
Number of successful extensions: 1114
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1094
Number of HSP's successfully gapped: 9
Length of query: 407
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 304
Effective length of database: 11,657,759
Effective search space: 3543958736
Effective search space used: 3543958736
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)