Os11g0118200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0118200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 181.96 | 0.634 | 4.06 | 0.35 | 1.94 | -1.27 | 0.695 | -0.213 | 0.496 | 20.8 | 29.47 | 302 | -- | -- |
| 181.97 | 0.628 | 4.07 | 0.326 | 1.93 | -1.29 | 0.703 | -- | 0.49 | 20.8 | 29.49 | 302 | -- | -- |
| 183.52 | 0.631 | 4.06 | 0.352 | 1.92 | -1.28 | -- | -0.471 | 0.501 | 20.8 | 29.49 | 305 | -- | -- |
| 183.6 | 0.631 | 4.07 | 0.298 | 1.92 | -1.32 | -- | -- | 0.488 | 20.8 | 29.48 | 305 | -- | -- |
| 329.89 | 0.846 | 4.07 | 0.166 | -- | -2.16 | -- | -0.132 | 0.316 | -- | 28.4 | 538 | -- | -- |
| 222.89 | 0.7 | 4.06 | 0.542 | 2.32 | -- | 1.22 | -- | 0.541 | 19.9 | -- | -- | -- | -- |
| 227.29 | 0.706 | 4.06 | 0.509 | 2.32 | -- | -- | -- | 0.543 | 19.9 | -- | -- | -- | -- |
| 329.63 | 0.846 | 4.06 | 0.1 | -- | -2.22 | -- | -- | 0.28 | -- | 28.4 | 538 | -- | -- |
| 185.88 | 0.635 | 4.07 | -- | 1.91 | -1.37 | -- | -- | 0.457 | 20.8 | 29.4 | 306 | -- | -- |
| 520.79 | 1.07 | 4.01 | 0.484 | -- | -- | -- | -- | 0.512 | -- | -- | -- | -- | -- |
| 234.11 | 0.716 | 4.08 | -- | 2.32 | -- | -- | -- | 0.486 | 19.9 | -- | -- | -- | -- |
| 329.88 | 0.846 | 4.06 | -- | -- | -2.23 | -- | -- | 0.268 | -- | 28.48 | 537 | -- | -- |
| 526.98 | 1.07 | 4.02 | -- | -- | -- | -- | -- | 0.458 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 175.01 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 9 |
| 2 | 175.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 9 |
| 21 | 177.19 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 16 |
| 43 | 178.44 | temperature | 25 | 90 | > th | dose dependent | rect. | 12 | 19 |
| 55 | 178.84 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 21 |
| 92 | 180.15 | temperature | 25 | 270 | > th | dose dependent | rect. | 12 | 4 |
| 162 | 181.97 | temperature | 30 | 270 | > th | dose independent | rect. | 12 | 4 |
| 181 | 182.59 | temperature | 30 | 270 | > th | dose independent | rect. | 11 | 6 |
| 186 | 182.69 | temperature | 30 | 270 | < th | dose independent | rect. | 4 | 23 |
| 198 | 182.95 | temperature | 30 | 90 | < th | dose independent | rect. | 10 | 15 |
| 275 | 184.43 | temperature | 30 | 270 | < th | dose independent | sin | 22 | NA |
| 318 | 185.10 | temperature | 25 | 270 | > th | dose dependent | sin | 21 | NA |
| 325 | 185.18 | temperature | 30 | 270 | > th | dose independent | sin | 22 | NA |
| 424 | 186.02 | temperature | 25 | 90 | > th | dose dependent | sin | 18 | NA |
| 431 | 186.13 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 12 | 9 |
| 467 | 186.38 | temperature | 30 | 270 | > th | dose independent | rect. | 17 | 23 |
| 481 | 186.45 | temperature | 10 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 515 | 186.76 | temperature | 30 | 270 | < th | dose independent | no | NA | NA |
| 531 | 187.03 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 13 | 7 |
| 552 | 187.23 | temperature | 30 | 270 | > th | dose independent | no | NA | NA |
| 733 | 187.83 | humidity | 70 | 90 | < th | dose independent | rect. | 13 | 7 |
| 747 | 187.85 | temperature | 25 | 10 | > th | dose independent | rect. | 13 | 7 |
| 798 | 188.20 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 920 | 189.04 | temperature | 25 | 270 | > th | dose dependent | rect. | 4 | 14 |
| 942 | 189.17 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 13 |
| 947 | 189.22 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 5 |
| 964 | 189.36 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 10 |
| 988 | 189.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 14 |