Os01g0746700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 5 protein.
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Os01g0746700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 5 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 407.74 | 0.949 | 5.96 | -3.87 | 0.1 | 2.28 | -3.14 | -7.09 | -1.14 | 19.2 | 25.71 | 1386 | -- | -- |
| 424.52 | 0.96 | 5.72 | -1.91 | 0.0943 | 1.56 | -3.31 | -- | -0.667 | 19.2 | 25.89 | 1391 | -- | -- |
| 410.49 | 0.944 | 5.95 | -3.82 | 0.805 | 2.79 | -- | -8.95 | -1.24 | 12.2 | 24.93 | 1041 | -- | -- |
| 432.82 | 0.969 | 5.71 | -1.89 | 0.619 | 1.7 | -- | -- | -0.686 | 14.1 | 25.83 | 1308 | -- | -- |
| 435 | 0.971 | 5.99 | -4.15 | -- | 2.46 | -- | -8.63 | -1.17 | -- | 26.06 | 1362 | -- | -- |
| 532.49 | 1.08 | 5.69 | -1.4 | 0.0922 | -- | -3.28 | -- | -0.549 | 19.2 | -- | -- | -- | -- |
| 554.23 | 1.1 | 5.69 | -1.32 | 0.349 | -- | -- | -- | -0.549 | 14.4 | -- | -- | -- | -- |
| 451.52 | 0.99 | 5.72 | -1.88 | -- | 1.54 | -- | -- | -0.686 | -- | 25.8 | 1409 | -- | -- |
| 518.61 | 1.06 | 5.64 | -- | 0.589 | 1.33 | -- | -- | -0.362 | 14.1 | 26.96 | 1283 | -- | -- |
| 561.46 | 1.11 | 5.69 | -1.33 | -- | -- | -- | -- | -0.558 | -- | -- | -- | -- | -- |
| 599.82 | 1.15 | 5.65 | -- | 0.375 | -- | -- | -- | -0.403 | 14.4 | -- | -- | -- | -- |
| 537.26 | 1.08 | 5.65 | -- | -- | 1.19 | -- | -- | -0.386 | -- | 26.82 | 1376 | -- | -- |
| 608.12 | 1.15 | 5.65 | -- | -- | -- | -- | -- | -0.41 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 398.79 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 2 | 404.30 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 17 |
| 5 | 406.16 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 6 | 407.10 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 11 |
| 20 | 407.57 | temperature | 25 | 1440 | > th | dose dependent | sin | 22 | NA |
| 66 | 408.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 131 | 409.47 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 150 | 409.66 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 179 | 409.91 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 184 | 409.98 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 210 | 410.45 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 268 | 411.96 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 17 |
| 277 | 412.14 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 304 | 413.10 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 307 | 413.14 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 324 | 414.05 | temperature | 25 | 720 | < th | dose independent | sin | 20 | NA |
| 364 | 415.57 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 16 |
| 400 | 417.47 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 405 | 417.64 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 414 | 418.41 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 431 | 418.98 | radiation | 1 | 720 | > th | dose independent | rect. | 9 | 21 |
| 435 | 419.22 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 11 |
| 455 | 419.92 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 12 |
| 459 | 420.02 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 473 | 420.36 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 12 |
| 486 | 420.64 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 490 | 420.72 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 501 | 420.94 | wind | 7 | 43200 | < th | dose independent | sin | 22 | NA |
| 502 | 420.95 | wind | 7 | 43200 | > th | dose independent | sin | 22 | NA |
| 519 | 421.18 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 14 |
| 524 | 421.23 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 531 | 421.27 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 543 | 421.36 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 8 |
| 544 | 421.37 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 557 | 421.37 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 19 |
| 566 | 421.45 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 17 |
| 587 | 421.60 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 19 |
| 605 | 421.72 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 19 |
| 616 | 421.78 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 626 | 421.82 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 15 |
| 681 | 422.26 | radiation | 30 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 709 | 422.38 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 741 | 422.58 | temperature | 25 | 720 | > th | dose independent | sin | 20 | NA |
| 781 | 422.76 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 792 | 422.81 | wind | 5 | 43200 | > th | dose dependent | sin | 20 | NA |
| 793 | 422.82 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 995 | 424.21 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 5 |