Os02g0766900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to (1-4)-beta-mannan endohydrolase precursor (EC 3.2.1.78).
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Os02g0766900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to (1-4)-beta-mannan endohydrolase precursor (EC 3.2.1.78).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.09 | 0.578 | 3.1 | 0.484 | 0.335 | -0.392 | -0.471 | 2.32 | 0.123 | 5.92 | 19.05 | 5848 | -- | -- |
| 154.01 | 0.578 | 3.16 | 0.115 | 0.354 | -0.636 | -0.596 | -- | 0.091 | 6.03 | 10.4 | 14470 | -- | -- |
| 151.56 | 0.573 | 3.1 | 0.505 | 0.328 | -0.391 | -- | 2.37 | 0.134 | 6.03 | 19.5 | 6031 | -- | -- |
| 154.23 | 0.578 | 3.17 | 0.092 | 0.33 | -0.635 | -- | -- | 0.0926 | 5.89 | 10.43 | 16405 | -- | -- |
| 156.93 | 0.583 | 3.1 | 0.522 | -- | -0.395 | -- | 2.33 | 0.149 | -- | 19.27 | 6196 | -- | -- |
| 159.83 | 0.593 | 3.23 | -0.389 | 0.333 | -- | -0.441 | -- | -0.171 | 5.91 | -- | -- | -- | -- |
| 160.3 | 0.593 | 3.23 | -0.392 | 0.33 | -- | -- | -- | -0.169 | 6.04 | -- | -- | -- | -- |
| 158.9 | 0.59 | 3.21 | -0.255 | -- | -0.699 | -- | -- | -0.0686 | -- | 10.4 | 16429 | -- | -- |
| 154.33 | 0.579 | 3.17 | -- | 0.331 | -0.577 | -- | -- | 0.0643 | 5.88 | 9.689 | 16333 | -- | -- |
| 165.95 | 0.602 | 3.23 | -0.382 | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
| 164.34 | 0.6 | 3.22 | -- | 0.325 | -- | -- | -- | -0.126 | 6.1 | -- | -- | -- | -- |
| 159.95 | 0.589 | 3.18 | -- | -- | -0.582 | -- | -- | 0.0706 | -- | 9.482 | 14968 | -- | -- |
| 169.81 | 0.608 | 3.22 | -- | -- | -- | -- | -- | -0.119 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.56 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 2 |
| 3 | 144.62 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 1 |
| 4 | 144.74 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 3 |
| 6 | 144.89 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 2 |
| 13 | 145.28 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 32 | 145.87 | humidity | 80.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 45 | 146.36 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 2 |
| 66 | 146.97 | wind | 1.0 | 90 | < th | dose dependent | rect. | 10 | 3 |
| 71 | 147.12 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 7 |
| 72 | 147.16 | wind | 1.0 | 90 | < th | dose independent | rect. | 10 | 3 |
| 74 | 147.16 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 11 |
| 77 | 147.22 | temperature | 25.0 | 90 | < th | dose independent | rect. | 10 | 4 |
| 94 | 147.39 | wind | 3.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 113 | 147.50 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 10 | 3 |
| 114 | 147.52 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 117 | 147.54 | temperature | 20.0 | 720 | > th | dose independent | rect. | 24 | 9 |
| 124 | 147.58 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 134 | 147.70 | temperature | 25.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 144 | 147.74 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 148 | 147.75 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 9 |
| 172 | 147.85 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 9 | 2 |
| 177 | 147.85 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 9 | 2 |
| 185 | 147.89 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 4 |
| 189 | 147.92 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 19 |
| 198 | 147.94 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 6 |
| 219 | 148.04 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 15 |
| 220 | 148.05 | temperature | 20.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 235 | 148.08 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 280 | 148.24 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 1 |
| 287 | 148.25 | wind | 3.0 | 90 | < th | dose dependent | rect. | 10 | 9 |
| 301 | 148.30 | temperature | 20.0 | 720 | < th | dose independent | rect. | 4 | 3 |
| 316 | 148.35 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 7 |
| 329 | 148.40 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 330 | 148.40 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 339 | 148.43 | temperature | 15.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 356 | 148.48 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 13 |
| 361 | 148.49 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 18 |
| 368 | 148.51 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 16 |
| 461 | 148.78 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 509 | 148.89 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 10 | 19 |
| 539 | 148.96 | temperature | 20.0 | 720 | > th | dose independent | sin | 8 | NA |
| 542 | 148.96 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 544 | 148.97 | temperature | 25.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 583 | 149.05 | temperature | 30.0 | 720 | < th | dose dependent | sin | 7 | NA |
| 585 | 149.05 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 4 |
| 615 | 149.16 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 9 |
| 618 | 149.16 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 627 | 149.19 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 694 | 149.35 | wind | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 717 | 149.40 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 16 |
| 733 | 149.44 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 734 | 149.44 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 735 | 149.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 780 | 149.50 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 809 | 149.54 | wind | 3.0 | 90 | < th | dose dependent | rect. | 10 | 13 |
| 843 | 149.59 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 863 | 149.62 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 11 | 19 |
| 869 | 149.63 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 883 | 149.66 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 892 | 149.67 | wind | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 895 | 149.67 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 5 | 5 |
| 958 | 149.77 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 961 | 149.77 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 2 |