Os03g0828300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to (1-4)-beta-mannan endohydrolase-like protein.
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Os03g0828300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to (1-4)-beta-mannan endohydrolase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 401.06 | 0.941 | 3.42 | -0.83 | 0.33 | -1.28 | -2.17 | 4.2 | -0.0967 | 14.3 | 20.14 | 3688 | -- | -- |
| 434.49 | 0.971 | 3.57 | -1.18 | 0.301 | -2.02 | -3.05 | -- | -0.243 | 13.9 | 19.27 | 5479 | -- | -- |
| 418.19 | 0.952 | 3.42 | -0.838 | 0.327 | -1.26 | -- | 4.47 | -0.0922 | 14.3 | 20.2 | 3705 | -- | -- |
| 453.27 | 0.992 | 3.58 | -1.33 | 0.333 | -2.15 | -- | -- | -0.254 | 14.1 | 19.21 | 5366 | -- | -- |
| 424.4 | 0.959 | 3.42 | -0.826 | -- | -1.31 | -- | 4.45 | -0.0883 | -- | 20.16 | 3707 | -- | -- |
| 499.71 | 1.05 | 3.7 | -2.68 | 0.397 | -- | -2.45 | -- | -0.797 | 14.2 | -- | -- | -- | -- |
| 522.13 | 1.07 | 3.71 | -2.75 | 0.393 | -- | -- | -- | -0.811 | 14.1 | -- | -- | -- | -- |
| 444.51 | 0.982 | 3.59 | -1.4 | -- | -2.49 | -- | -- | -0.264 | -- | 19.16 | 3849 | -- | -- |
| 455.6 | 0.994 | 3.54 | -- | 0.34 | -3.43 | -- | -- | -0.0212 | 14.6 | 17.9 | 11254 | -- | -- |
| 531.37 | 1.08 | 3.72 | -2.76 | -- | -- | -- | -- | -0.82 | -- | -- | -- | -- | -- |
| 720.91 | 1.26 | 3.64 | -- | 0.446 | -- | -- | -- | -0.505 | 14.3 | -- | -- | -- | -- |
| 462.29 | 1 | 3.54 | -- | -- | -3.5 | -- | -- | -0.0204 | -- | 17.9 | 11150 | -- | -- |
| 732.72 | 1.26 | 3.65 | -- | -- | -- | -- | -- | -0.514 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 390.68 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 2 | 392.27 | wind | 3.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 4 | 396.49 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 6 | 397.14 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 7 | 397.44 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 8 | 398.28 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 16 | 5 |
| 11 | 399.15 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 15 | 399.89 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 17 | 400.09 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 5 |
| 20 | 400.35 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 21 | 400.64 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 31 | 401.04 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 43 | 402.24 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 56 | 403.29 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 65 | 403.70 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 76 | 404.39 | temperature | 20.0 | 4320 | > th | dose independent | sin | 18 | NA |
| 80 | 404.47 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 10 | 15 |
| 99 | 405.08 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 109 | 405.31 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 10 | 15 |
| 120 | 405.45 | temperature | 20.0 | 4320 | < th | dose independent | sin | 18 | NA |
| 125 | 405.52 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 142 | 405.52 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 227 | 407.18 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 261 | 407.84 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 279 | 408.03 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 352 | 409.42 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 2 | 19 |
| 365 | 409.61 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 2 | 19 |
| 380 | 409.80 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 5 | 16 |
| 412 | 410.10 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 461 | 410.53 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 494 | 410.85 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 496 | 410.85 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 518 | 411.02 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 535 | 411.26 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 14 | 23 |
| 536 | 411.29 | temperature | 20.0 | 4320 | > th | dose independent | no | NA | NA |
| 540 | 411.34 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 14 | 23 |
| 549 | 411.41 | temperature | 20.0 | 4320 | < th | dose independent | no | NA | NA |
| 570 | 411.75 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 571 | 411.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 598 | 412.12 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 603 | 412.19 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 19 | 23 |
| 619 | 412.40 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 19 | 23 |
| 621 | 412.45 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 644 | 412.75 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 684 | 413.20 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 692 | 413.32 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 18 |
| 696 | 413.37 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 701 | 413.39 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 18 |
| 719 | 413.58 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 726 | 413.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 736 | 413.78 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 759 | 413.94 | wind | 3.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 790 | 414.16 | wind | 3.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 806 | 414.28 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 851 | 414.59 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 866 | 414.67 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 18 | 17 |
| 871 | 414.72 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 933 | 414.94 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 15 |
| 953 | 415.10 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 15 |