Os03g0828500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to (1-4)-beta-mannan endohydrolase precursor (EC 3.2.1.78).
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Os03g0828500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to (1-4)-beta-mannan endohydrolase precursor (EC 3.2.1.78).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.2 | 0.379 | 10.8 | -0.871 | 1.17 | -0.506 | -1.13 | 0.708 | -0.329 | 19.3 | 13.8 | 1432 | -- | -- |
| 65.96 | 0.378 | 10.8 | -0.786 | 1.14 | -0.503 | -1.19 | -- | -0.299 | 19.1 | 14.71 | 1379 | -- | -- |
| 68.45 | 0.385 | 10.8 | -0.856 | 1.14 | -0.5 | -- | 0.706 | -0.327 | 19.3 | 19.09 | 1382 | -- | -- |
| 69.59 | 0.389 | 10.8 | -0.772 | 1.15 | -0.484 | -- | -- | -0.299 | 19.2 | 16.52 | 1390 | -- | -- |
| 72.1 | 0.395 | 10.8 | -0.843 | -- | -1.62 | -- | 2.5 | -0.234 | -- | 7.56 | 916 | -- | -- |
| 73.69 | 0.402 | 10.8 | -0.727 | 1.17 | -- | -1.1 | -- | -0.181 | 19.3 | -- | -- | -- | -- |
| 76.91 | 0.411 | 10.8 | -0.704 | 1.17 | -- | -- | -- | -0.184 | 19.4 | -- | -- | -- | -- |
| 75.19 | 0.404 | 10.8 | -0.794 | -- | -1.68 | -- | -- | -0.282 | -- | 6.214 | 932 | -- | -- |
| 83.29 | 0.425 | 10.8 | -- | 1.17 | -0.538 | -- | -- | -0.244 | 19.3 | 9.946 | 1416 | -- | -- |
| 149.74 | 0.572 | 10.8 | -0.723 | -- | -- | -- | -- | -0.202 | -- | -- | -- | -- | -- |
| 89.98 | 0.444 | 10.8 | -- | 1.17 | -- | -- | -- | -0.105 | 19.4 | -- | -- | -- | -- |
| 90.73 | 0.444 | 10.8 | -- | -- | -1.6 | -- | -- | -0.194 | -- | 9.42 | 909 | -- | -- |
| 163.52 | 0.597 | 10.7 | -- | -- | -- | -- | -- | -0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.95 | radiation | 30 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 2 | 62.07 | radiation | 30 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 17 | 62.48 | radiation | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 32 | 62.62 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 48 | 62.76 | radiation | 30 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 49 | 62.80 | radiation | 30 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 53 | 62.91 | radiation | 30 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 54 | 62.92 | radiation | 30 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 59 | 62.98 | radiation | 30 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 65 | 63.29 | temperature | 20 | 30 | > th | dose independent | rect. | 20 | 8 |
| 82 | 63.73 | radiation | 10 | 1440 | < th | dose independent | rect. | 14 | 4 |
| 83 | 63.74 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 86 | 63.91 | radiation | 10 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 87 | 63.91 | radiation | 10 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 111 | 64.20 | radiation | 10 | 1440 | < th | dose dependent | rect. | 7 | 11 |
| 112 | 64.23 | radiation | 10 | 1440 | < th | dose dependent | rect. | 7 | 16 |
| 114 | 64.23 | radiation | 10 | 1440 | < th | dose dependent | rect. | 7 | 20 |
| 145 | 64.46 | radiation | 10 | 1440 | < th | dose independent | sin | 17 | NA |
| 150 | 64.47 | humidity | 90 | 4320 | > th | dose dependent | rect. | 3 | 14 |
| 152 | 64.49 | radiation | 10 | 1440 | < th | dose dependent | sin | 21 | NA |
| 181 | 64.71 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 185 | 64.75 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 8 |
| 186 | 64.76 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 8 |
| 231 | 64.95 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 237 | 64.98 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 240 | 64.99 | humidity | 90 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 241 | 64.99 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 243 | 64.99 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 324 | 65.17 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 340 | 65.22 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 385 | 65.30 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 387 | 65.30 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 393 | 65.30 | radiation | 20 | 1440 | < th | dose dependent | rect. | 21 | 21 |
| 403 | 65.31 | radiation | 20 | 1440 | < th | dose dependent | rect. | 2 | 16 |
| 406 | 65.31 | radiation | 20 | 1440 | < th | dose dependent | rect. | 2 | 21 |
| 421 | 65.32 | radiation | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 474 | 65.36 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 486 | 65.37 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 488 | 65.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 498 | 65.37 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 513 | 65.38 | radiation | 20 | 1440 | < th | dose dependent | rect. | 14 | 23 |
| 552 | 65.41 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 573 | 65.42 | humidity | 90 | 4320 | > th | dose dependent | sin | 2 | NA |
| 591 | 65.44 | radiation | 10 | 1440 | > th | dose independent | rect. | 7 | 11 |
| 710 | 65.56 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 712 | 65.56 | radiation | 10 | 1440 | > th | dose independent | rect. | 5 | 13 |
| 786 | 65.57 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 813 | 65.58 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 841 | 65.60 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 992 | 65.67 | humidity | 90 | 4320 | > th | dose dependent | rect. | 5 | 1 |