BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0727300 Os02g0727300|AK065834
(973 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0727300 U box domain containing protein 1834 0.0
Os06g0275700 U box domain containing protein 1126 0.0
Os12g0277400 U box domain containing protein 334 2e-91
Os03g0657100 U box domain containing protein 261 2e-69
Os12g0277000 U box domain containing protein 250 3e-66
Os01g0651900 117 4e-26
Os04g0455050 96 1e-19
Os02g0732200 U box domain containing protein 79 2e-14
Os01g0948500 Armadillo-like helical domain containing protein 72 2e-12
Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2... 71 4e-12
Os02g0738200 U box domain containing protein 68 3e-11
>Os02g0727300 U box domain containing protein
Length = 973
Score = 1834 bits (4750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 899/973 (92%), Positives = 899/973 (92%)
Query: 1 MLLVVSGDVRQQNFNESGAAIMERQTARRTPSSVTQMPEFPPACVNLAKELTARCRARAL 60
MLLVVSGDVRQQNFNESGAAIMERQTARRTPSSVTQMPEFPPACVNLAKELTARCRARAL
Sbjct: 1 MLLVVSGDVRQQNFNESGAAIMERQTARRTPSSVTQMPEFPPACVNLAKELTARCRARAL 60
Query: 61 QLTDDEILSITQDLESVIENLCDYIGRVPTSALGSNAYTDGAVKALSVRGFLEDDMLTNA 120
QLTDDEILSITQDLESVIENLCDYIGRVPTSALGSNAYTDGAVKALSVRGFLEDDMLTNA
Sbjct: 61 QLTDDEILSITQDLESVIENLCDYIGRVPTSALGSNAYTDGAVKALSVRGFLEDDMLTNA 120
Query: 121 VNSMPNRKYFHDSNMPRLVEFLQGMYHESDEFGGHLFSSLPEVSEYIEPLYDALFCPLTN 180
VNSMPNRKYFHDSNMPRLVEFLQGMYHESDEFGGHLFSSLPEVSEYIEPLYDALFCPLTN
Sbjct: 121 VNSMPNRKYFHDSNMPRLVEFLQGMYHESDEFGGHLFSSLPEVSEYIEPLYDALFCPLTN 180
Query: 181 QVMTDPVLTESGVTYERRAIEEHFERFADSSENVICPVTKMPLQSKTLMNNASLKSVIAE 240
QVMTDPVLTESGVTYERRAIEEHFERFADSSENVICPVTKMPLQSKTLMNNASLKSVIAE
Sbjct: 181 QVMTDPVLTESGVTYERRAIEEHFERFADSSENVICPVTKMPLQSKTLMNNASLKSVIAE 240
Query: 241 WTMRNEAMRIRIARTALSLSSTEAMVLEAIHELKSLAKLRGKNREQMHKIGVTRLLARLL 300
WTMRNEAMRIRIARTALSLSSTEAMVLEAIHELKSLAKLRGKNREQMHKIGVTRLLARLL
Sbjct: 241 WTMRNEAMRIRIARTALSLSSTEAMVLEAIHELKSLAKLRGKNREQMHKIGVTRLLARLL 300
Query: 301 DNHNVQIRHSALELLCFLVEDEEGKDIIGKTKAIARTIKLLSTNGTDERHAAISFXXXXX 360
DNHNVQIRHSALELLCFLVEDEEGKDIIGKTKAIARTIKLLSTNGTDERHAAISF
Sbjct: 301 DNHNVQIRHSALELLCFLVEDEEGKDIIGKTKAIARTIKLLSTNGTDERHAAISFLLELS 360
Query: 361 XXXXXXXDIGSTAGSILILTTMRINDSDDPIAAQKAGEVLKNLEKCSKNIKYMAESGYLE 420
DIGSTAGSILILTTMRINDSDDPIAAQKAGEVLKNLEKCSKNIKYMAESGYLE
Sbjct: 361 KSQLLLEDIGSTAGSILILTTMRINDSDDPIAAQKAGEVLKNLEKCSKNIKYMAESGYLE 420
Query: 421 PLQSHLVEGSEEMQMEMVGYLAELIQEQELTIDINGSTSGVLIKMVHSCNTVARKAALDV 480
PLQSHLVEGSEEMQMEMVGYLAELIQEQELTIDINGSTSGVLIKMVHSCNTVARKAALDV
Sbjct: 421 PLQSHLVEGSEEMQMEMVGYLAELIQEQELTIDINGSTSGVLIKMVHSCNTVARKAALDV 480
Query: 481 LVQLSSHRPNSKTLVEAGVVPVMVEELFIRKVDDEPLSYKAMAAAVLANVVESGIDPDNT 540
LVQLSSHRPNSKTLVEAGVVPVMVEELFIRKVDDEPLSYKAMAAAVLANVVESGIDPDNT
Sbjct: 481 LVQLSSHRPNSKTLVEAGVVPVMVEELFIRKVDDEPLSYKAMAAAVLANVVESGIDPDNT 540
Query: 541 VVNKEGHVLTSKYSIYNFVHMLKCFMPDELNLSIIRXXXXXXXXXXXXXXXXXXXRENHR 600
VVNKEGHVLTSKYSIYNFVHMLKCFMPDELNLSIIR RENHR
Sbjct: 541 VVNKEGHVLTSKYSIYNFVHMLKCFMPDELNLSIIRVLLALTAHAKALAAVVSVVRENHR 600
Query: 601 GHSIVELMSSWTEALGVASTRLLITLSAHMGHTIAERLCKTQGQPRRLVRSIFRAGRAAI 660
GHSIVELMSSWTEALGVASTRLLITLSAHMGHTIAERLCKTQGQPRRLVRSIFRAGRAAI
Sbjct: 601 GHSIVELMSSWTEALGVASTRLLITLSAHMGHTIAERLCKTQGQPRRLVRSIFRAGRAAI 660
Query: 661 TERHAAAVTLLSRLPYRNVSLNLALVQEGAVPAILRGIEEMGSGAARMTTSRHAAPYMEG 720
TERHAAAVTLLSRLPYRNVSLNLALVQEGAVPAILRGIEEMGSGAARMTTSRHAAPYMEG
Sbjct: 661 TERHAAAVTLLSRLPYRNVSLNLALVQEGAVPAILRGIEEMGSGAARMTTSRHAAPYMEG 720
Query: 721 LVGTLVRLTATLYNPDVLKAAMDHDFXXXXXXXXXXXXXXXEVQRLAAVGLENLSYHSIK 780
LVGTLVRLTATLYNPDVLKAAMDHDF EVQRLAAVGLENLSYHSIK
Sbjct: 721 LVGTLVRLTATLYNPDVLKAAMDHDFASVLTALLAGAAGSGEVQRLAAVGLENLSYHSIK 780
Query: 781 LSXXXXXXXXXXXXKKMTILKRLKDARVHNHSSSKNPPLNVCPVHRGVCTPATTFXXXXX 840
LS KKMTILKRLKDARVHNHSSSKNPPLNVCPVHRGVCTPATTF
Sbjct: 781 LSRPPPPPEDEPRPKKMTILKRLKDARVHNHSSSKNPPLNVCPVHRGVCTPATTFCLLEA 840
Query: 841 XXXXXXXXXXXNDDARVVDAALGALCTLVDDRVDVEKAVVALAGQGAARRVLAALRQHRG 900
NDDARVVDAALGALCTLVDDRVDVEKAVVALAGQGAARRVLAALRQHRG
Sbjct: 841 GAVEGLLACLENDDARVVDAALGALCTLVDDRVDVEKAVVALAGQGAARRVLAALRQHRG 900
Query: 901 NSLWHRCFSVVEKLLVHGDDVCVREVTGDRMLPTALVSAFHRGDANAKQAAESILRRLHK 960
NSLWHRCFSVVEKLLVHGDDVCVREVTGDRMLPTALVSAFHRGDANAKQAAESILRRLHK
Sbjct: 901 NSLWHRCFSVVEKLLVHGDDVCVREVTGDRMLPTALVSAFHRGDANAKQAAESILRRLHK 960
Query: 961 MPDYSATYMSVEF 973
MPDYSATYMSVEF
Sbjct: 961 MPDYSATYMSVEF 973
>Os06g0275700 U box domain containing protein
Length = 973
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/979 (59%), Positives = 704/979 (71%), Gaps = 33/979 (3%)
Query: 22 MERQTARRTPSSVTQMPEFPPACVNLAKELTARCRARALQLTDDEILSITQDLESVIENL 81
ME Q + + +V + E+ A V+LAK+L RC A A +L +D++L +T+DL+SVI+N+
Sbjct: 1 MELQRVQNSTVNVMHVMEYLAANVDLAKDLVMRCSAVARELKNDDLLGMTEDLDSVIKNI 60
Query: 82 CDYIGRVPTSALGSNAYTDGAVKAL--------------SVRGFLEDDMLTNAVNSMPNR 127
+ R+P S GS+ + DG A S G+ E DM NS P R
Sbjct: 61 GHELSRIPASTFGSSRFPDGRADANLQIAGHRPRYCDQNSCDGYSEADMSIIPANSRPRR 120
Query: 128 KYFHDSNMPRLVEFLQGMYHESDEFGGHLFSSLPEVSEYIEPLYDALFCPLTNQVMTDPV 187
+ H+S+MPRLV+FLQGMYHES + G H F+SLPEV+EY+EPLYD+ FCPLTN+VM DPV
Sbjct: 121 RTLHNSDMPRLVDFLQGMYHESHDIGAHSFNSLPEVAEYVEPLYDSFFCPLTNKVMVDPV 180
Query: 188 LTESGVTYERRAIEEHFERFADSSENVICPVTKMPLQSKTLMNNASLKSVIAEWTMRNEA 247
TESGVTY+R+AIEE+FE+FAD SE V+CPVTKM +QSK L +N LKS IAEW MRNEA
Sbjct: 181 TTESGVTYDRKAIEEYFEKFADGSEPVVCPVTKMSMQSKALRSNVPLKSTIAEWIMRNEA 240
Query: 248 MRIRIARTALSLSSTEAMVLEAIHELKSLAKLRGKNREQMHKIGVTRLLARLLDNHNVQI 307
R+RIARTALS++STEAM+LEAI ELK LAK+R KNREQMHKIG+T+ L RLL++ + I
Sbjct: 241 TRVRIARTALSMASTEAMLLEAIQELKLLAKIRRKNREQMHKIGITKFLPRLLEHKDGLI 300
Query: 308 RHSALELLCFLVEDEEGKDIIGKTKAIARTIKLLSTNGTDERHAAISFXXXXXXXXXXXX 367
R +L+LLC L EDE GK++I T+AI RTIKLLS+N DERHAAISF
Sbjct: 301 RCDSLDLLCLLAEDETGKEVIANTRAITRTIKLLSSNSPDERHAAISFLLELSKSELLLE 360
Query: 368 DIGSTAGSILILTTMRINDSDDPIAAQKAGEVLKNLEKCSKNIKYMAESGYLEPLQSHLV 427
+IGST+GSIL+LTTM+ NDSDDP+AA+KAGEVLKNLE C KNIKYMAESGYL+PLQ HLV
Sbjct: 361 NIGSTSGSILMLTTMKFNDSDDPVAAEKAGEVLKNLENCPKNIKYMAESGYLDPLQRHLV 420
Query: 428 EGSEEMQMEMVGYLAELIQEQELTIDINGSTSGVLIKMVHSCNTVARKAALDVLVQLSSH 487
EGSE++QMEMV YL EL+Q+QE+TI+I GS S +LIKMVHS NTV RKAALDVLVQ+SS
Sbjct: 421 EGSEDVQMEMVSYLGELVQKQEMTINIAGSASEILIKMVHSGNTVIRKAALDVLVQISSD 480
Query: 488 RPNSKTLVEAGVVPVMVEELFIRKVDDEPLSYKAMAAAVLANVVESGIDPDNTVVNKEGH 547
PNSKTLV+AG VPVMVEELFIRK+DDEP+ K AAAVLAN+VESG+DPD VVNKEGH
Sbjct: 481 GPNSKTLVDAGAVPVMVEELFIRKIDDEPMGSKTEAAAVLANIVESGLDPDTIVVNKEGH 540
Query: 548 VLTSKYSIYNFVHMLKCFMPDELNLSIIRXXXXXXXXXXXXXXXXXXXRENHRGHSIVEL 607
V+TSKYS+YNF HMLKC MPD+LNLSIIR +E +++E
Sbjct: 541 VITSKYSVYNFTHMLKCSMPDDLNLSIIRVLLALTALPKPLMTVVSVMKEQDSSLTVIEF 600
Query: 608 MSSWTEALGVASTRLLITLSAHMGHTIAERLCKTQGQPRRLVRSIFRAGRAAITERHAAA 667
M S TEALG+++TRLLI LS MGHTIAE+LCK GQP RLV+SI + GR +TERHA A
Sbjct: 601 MGSKTEALGISATRLLIALSPQMGHTIAEKLCKAPGQPGRLVKSIGQPGR--VTERHAVA 658
Query: 668 VTLLSRLPYRNVSLNLALVQEGAVPAILRGIEEMGSGAARMTTSRHAAPYMEGLVGTLVR 727
TLL+RLPY+N++LNLAL+++GAVP +L IEEM G R+ SRHA YMEGLVG LVR
Sbjct: 659 ATLLARLPYQNITLNLALLEQGAVPTLLAKIEEMQRGEMRV--SRHAKTYMEGLVGALVR 716
Query: 728 LTATLYNPDVLKAAMDHDFXXXXXXXXXXXXXXXEVQRLAAVGLENLSYHSIKLSXXXXX 787
+T TLY+PDVL AAMDH+F EVQRLAAVGLENLS+ S+ LS
Sbjct: 717 MTMTLYDPDVLLAAMDHNFTAVLTDLLVRSAGSDEVQRLAAVGLENLSHQSVNLS--QPP 774
Query: 788 XXXXXXXKKMTILKRLKDA---RVHNHSSSKNPPL---NVCPVHRGVCTPATTF-XXXXX 840
KK IL+RL+DA RVH+++ PP +CPVHRGVC+PATTF
Sbjct: 775 SEEQRRPKKKNILRRLRDAHTGRVHDNNRKPPPPPAQGRLCPVHRGVCSPATTFCLAEAG 834
Query: 841 XXXXXXXXXXXNDDARVVDAALGALCTLVDDRVDVEKAVVALAGQGAARRVLAALRQHR- 899
N++ RVVDA LGALCTL+DD VDVE+ V LA AAR VL ALRQHR
Sbjct: 835 AVEALVGVLESNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHDAARHVLRALRQHRD 894
Query: 900 -----GNSLWHRCFSVVEKLLVHGDDVCVREVTGDRMLPTALVSAFHRGDANAKQAAESI 954
++ RCF VE+ L HG + CVR+VT DR LP+ALVSAFH+GDA KQ AES+
Sbjct: 895 VGGDTAGAVSRRCFWAVERFLAHGGERCVRDVTADRALPSALVSAFHKGDAATKQVAESV 954
Query: 955 LRRLHKMPDYSATYMSVEF 973
LR LH+MPDYSATY+SVE
Sbjct: 955 LRSLHRMPDYSATYVSVEL 973
>Os12g0277400 U box domain containing protein
Length = 806
Score = 334 bits (857), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 234/803 (29%), Positives = 401/803 (49%), Gaps = 21/803 (2%)
Query: 167 IEPLYDALFCPLTNQVMTDPVLTESGVTYERRAIEEHFERFADSSENVICPVTKMPLQSK 226
+EP+Y++ CPL+ QVM DPV ESG T+ER AI + F+ ++CPVT L S
Sbjct: 18 VEPIYESFLCPLSKQVMRDPVTIESGATFEREAILKWFKDNGSGGRRLVCPVTNKELSST 77
Query: 227 TLMNNASLKSVIAEWTMRNEAMRIRIARTALSLSSTEAMVLEAIHELKSLAKLRGKNREQ 286
L + +L++ I EW RNEA ++ +AR +L+ +E +L+A+ + + + +R
Sbjct: 78 ELNPSIALRNTIDEWMHRNEAAKLDVARKSLTSDCSEGDILQALEYVAEICQRSRSSRHL 137
Query: 287 MHKIGVTRLLARLLDNHNVQIRHSALELLCFLVE-DEEGKDIIGKTKAIARTIKLLSTNG 345
+ K+G+ L+ LL N + ++R AL L F+ + D + K+ I I +K L+
Sbjct: 138 VRKVGLISLITDLLKNSSPKVRQKALGSLRFVAKNDNDNKNEIAAGDNIRTIVKFLNHGH 197
Query: 346 TDERHAAISFXXXXXXXXXXXXDIGSTAGSILILTTMRINDSDDPIAAQKAGEVLKNLEK 405
+ E+ A+S IGS +G+ILIL + + ++ + +A + L+NLE
Sbjct: 198 SQEKEQAVSLLYELSEYKPLSEKIGSVSGAILILVGLSSSKVENLLTVDRAEKTLENLES 257
Query: 406 CSKNIKYMAESGYLEPLQSHLVEGSEEMQMEMVGYLAELIQEQELTIDINGSTSGVLIKM 465
C KN++ MAE+G L+PL L+EGS + Q+ M +L EL+ ++ + + + L+ +
Sbjct: 258 CEKNVRQMAENGRLQPLLRLLLEGSSDTQLSMAAHLGELVLSNDVKVLVAQTAGSTLVNI 317
Query: 466 VHSCNTVARKAALDVLVQLSSHRPNSKTLVEAGVVPVMVEELFIRKVDDEPLSYKAMAAA 525
+ S N AR+AAL L Q+SS+ ++K L+EAG++P ++ +LF + P+ K ++A
Sbjct: 318 MKSGNREAREAALKALNQISSYDTSAKILIEAGILPPLITDLFTVGSNQLPMRLKEVSAT 377
Query: 526 VLANVVESGIDPDNTVVNKEGHVLTSKYSIYNFVHMLKCFMPDELNLSIIRXXXXXXXXX 585
+LAN+V SG ++ ++ L S+ ++N +H++ P + +++
Sbjct: 378 ILANIVASGASFESVPLDHNRQNLVSEEIVHNLLHLISNTGP-AIECKLLQVLVGLTTSA 436
Query: 586 XXXXXXXXXXRENHRGHSIVELMSSWTEALGVASTRLLITLSAHMGHTIAERLCKTQGQP 645
+ + S+++ + + + +AS +LL +S MG +AE Q
Sbjct: 437 TTVQSIVDAIKSSGATVSLIQFVEAPQREVRLASIKLLNNISPFMGQELAEAFRGNFSQL 496
Query: 646 RRLVRSIFRAGRAAITERHAAAVTLLSRLPYRNVSLNLALVQEGAVPAILRGIEEMGSGA 705
LVR I A I+E AAA L++ LP R+ L L+Q+GA I+ + + G
Sbjct: 497 SSLVRVI--ADNNGISEEQAAAAGLIADLPPRDSVLTRRLLQDGAFSTIITKVTMVRQGD 554
Query: 706 ARMTTSRHAAPYMEGLVGTLVRLTATLYNPDVLKAAMDHDFXXXXXXXXXXXXXXXEVQR 765
R R P++EGLV + R+T L + D++ A D++ VQ
Sbjct: 555 IR--GGRFVNPFLEGLVRVVSRITFILDDLDIIDVARDYNLTPLFTDLLQMNGLDT-VQI 611
Query: 766 LAAVGLENLSYHSIKLSXXXXXXXXXXXXKKMTILKRLKDARVHNHSSSKNPPLNVCPVH 825
++A LENLS S L+ L S K+ C VH
Sbjct: 612 VSATALENLSRQSKLLTRIVPAPNPGFCFSIFPCL------------SQKSVATGACRVH 659
Query: 826 RGVCTPATTFXXXXXXXXXXXXXXXXNDDARVVDAALGALCTLVDDRVDVEKAVVALAGQ 885
G+C+ +F +++ +VV+AAL AL TL++D VD+E+ V+ L
Sbjct: 660 VGICSARESFCLLEGKAVEKLVACLDHNNEKVVEAALAALSTLLEDGVDIEQGVMVLCDA 719
Query: 886 GAARRVLAALRQHRGNSLWHRCFSVVEKLLVHGDDVCVREVTGDRMLPTALVSAFHRGDA 945
+L L ++R +L R VE++L D E++G++ + TALV AF GD+
Sbjct: 720 EGVNPILEVLCENRNEALRQRAVWAVERILRI--DEIAYEISGNQNVGTALVEAFRHGDS 777
Query: 946 NAKQAAESILRRLHKMPDYSATY 968
+Q AE L+ + K+P++S +
Sbjct: 778 RTRQIAERALKHVDKLPNFSGIF 800
>Os03g0657100 U box domain containing protein
Length = 824
Score = 261 bits (668), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 235/839 (28%), Positives = 379/839 (45%), Gaps = 54/839 (6%)
Query: 162 EVSEYIEPLYDALFCPLTNQVMTDPVLTESGVTYERRAIEEHFERFADSSENVICPVTKM 221
E+SE E ++A CPLT QVM DPV E+G T+ER AI + F D+ CP+T+
Sbjct: 7 EMSEE-EGAFEAFVCPLTKQVMRDPVTIETGQTFEREAILKWFRECRDNGRRPTCPLTQR 65
Query: 222 PLQSKTLMNNASLKSVIAEWTMRNEAMRIRIARTAL--------SLSSTEAMVLEAIHEL 273
L+ + + +L+SVI EW RNE + A +L E L A+ +
Sbjct: 66 ELRDTEVSPSVALRSVIHEWRARNEEKDLDRACASLVGGFAGHAGDEEEEESALRALVHV 125
Query: 274 KSLAKLRGKNREQMHKIGVTRLLARLLDNHNVQIRHSALELLCFLVED-EEGKDIIGKTK 332
+ + +++ + + GV R +A +L + + ++R +L++L LVED ++ K+ +GK
Sbjct: 126 SQICQRSAASKDLVRRRGVLRAVAEMLKSGSRRLRLKSLQVLRVLVEDNDDNKEELGKGD 185
Query: 333 AIARTIKLLSTNGTDERHAAISFXXXXXXXXXXXXDIGSTAGSILILTTMRINDSDDPIA 392
I IK LS ER A+S IG+ G+IL+L M + S+ +A
Sbjct: 186 TIRTIIKFLSNEHVQERELAVSLLHELSGHEPTCERIGAVYGAILLLVGMGSSKSESAVA 245
Query: 393 AQKAGEVLKNLEKCSKNIKYMAESGYLEPLQSHLVEGSEEMQMEMVGYLAELIQEQELTI 452
KA L+NL++ N+K MA++G L+PL + L+ G + ++ M YL EL +
Sbjct: 246 VDKAESTLRNLDRFDANVKQMADNGRLQPLLTRLLRGEPDTRVAMADYLGELALANDDKA 305
Query: 453 DINGSTSGVLIKMVHSCNTVARKAALDVLVQLSSHRPNSKTLVE-AGVVPVMVEELFIRK 511
+ +L+ M+ + T A++A L L ++SS ++K L++ AGV+P +V ++
Sbjct: 306 AVAEQAGPLLVGMLRTGATPAKEATLKALREISSSEASAKLLLQRAGVLPPLVNDVLF-S 364
Query: 512 VDDEPLSYKAMAAAVLANVVESGID------------PDNTVVNKEGHVLTSKYSIYNFV 559
P+ K +AA +LAN+V SG D L S+ +++ +
Sbjct: 365 TGHLPMKLKELAATILANLVASGADFRSIPLDDDEDDDGGGGGRGRRRTLLSEDVVHSQL 424
Query: 560 HMLKCFMPDELNLSIIRXXXXXXXXXXXXXXXXXXXRENHRGHSIVELMSSWTEALGVAS 619
H++ P + ++ + + S+++ + + + V S
Sbjct: 425 HLISNTGP-AIGCRLLSVLAGLTSSRATVADVVAAVKSSGATISLIQFIEAAHRDIRVES 483
Query: 620 TRLLITLSAHMGHTIAERLCKTQGQPRRLVRSIFRAGRAAITERHAAAVTLLSRLPYRNV 679
+LL L+ +MG +A+ L G L+R+I G +TE AAAV LL LP +
Sbjct: 484 LKLLRNLAPYMGAELADAL---GGSLSSLLRAISSDG-GGVTEEQAAAVGLLGDLPEGDS 539
Query: 680 SLNLALVQEGAVPAILRGIEEMGSGAARMTTSRHAAPYMEGLVGTLVRLTATL-----YN 734
SL L GA A+ + E+ G R +R+ P EG+V + R+T L Y
Sbjct: 540 SLTRQLFDLGAFRALAPKLAELRRGTIR-GGNRYVTPLTEGVVKVMYRVTCALEEDAEYV 598
Query: 735 PDVLKAAMDHDFXXXXXXXXXXXXXXXEVQRLAAVGLENLSYHSIKLSXXXXXXXXXXXX 794
+A + F VQ +A+ LE LS S L+
Sbjct: 599 EFAREAGLAPLFVELLHTNGMDT-----VQLYSAMALEKLSLQSSHLT---------AIP 644
Query: 795 KKMTILKRLKDARVHNHSSSKNPPLNVCPVHRGVCTPATTFXXXXXXXXXXXXXXXX--- 851
+ A + ++ P VC VH G C+ TF
Sbjct: 645 APPSPPAGFGCACLGRRPAAAAVPAGVCRVHGGFCSLRETFCLAQADGGKAVERLVACLD 704
Query: 852 NDDARVVDAALGALCTLVDDRVDVEKAVVALAGQGAARRVLAALRQHRGNSLWHRCFSVV 911
+ D RVV+AAL AL TLV D VD + VV L R V+ + + R +L R V
Sbjct: 705 HLDGRVVEAALAALSTLVCDGVDAREGVVVLGEADGLRPVVDIMVESRTEALQRRAVWAV 764
Query: 912 EKLLVHGDDVCVREVTGDRMLPTALVSAFHRGDANAKQAAESILRRLHKMPDYSATYMS 970
E++L + EV D+ + +ALV A+ GD +Q AE LR L ++P++SA + S
Sbjct: 765 ERILRV--EEIAGEVAADQTVASALVEAYRNGDPRTRQTAERALRHLDRIPNFSAAFQS 821
>Os12g0277000 U box domain containing protein
Length = 843
Score = 250 bits (639), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 219/804 (27%), Positives = 369/804 (45%), Gaps = 42/804 (5%)
Query: 173 ALFCPLTNQVMTDPVLTESGVTYERRAIEEHFERFADSSENVICPVTKMPLQSKTLMNNA 232
A CP+T +VM DPV+ E+G +ER AI F A CPVT + +
Sbjct: 46 AFLCPITMEVMRDPVVVETGHAFEREAIARWFSECASLGAAPRCPVTMEVVDGADVKPVV 105
Query: 233 SLKSVIAEWTMRNEAMRIRIARTALSLSSTEAMVLEAIHELKSLAKLRGKNREQMHKIGV 292
+L++ I EWT R E +R A L+ +++E L + + KL + + + G+
Sbjct: 106 ALRAAIEEWTSRRETAALRRACRWLTKAASEKEALRGLDAVMRGWKLARVGKRVVRRDGM 165
Query: 293 TRLLARLLDNHNVQIRHSALELLC-FLVEDEEGKDIIGKTKAIARTIKLLSTNGTDERHA 351
++A +L N + ++R AL+ L F ED+E +D + + I R +K + ER
Sbjct: 166 VPMVAAMLRNGSARVRLKALQALREFAREDDEYRDSVSEGDTIRRIVKFIDFEDCQEREL 225
Query: 352 AISFXXXXXXXXXXXXDIGSTAGSILILTTMRINDSDDPIAAQKAGEVLKNLEKCSKNIK 411
A+S I G+ILIL + + S +P A++A L+NLEKC KN+
Sbjct: 226 AVSLLCELSKSEMVCEKISELNGAILILGKVACSKSQNPALAEEAEMTLENLEKCEKNVL 285
Query: 412 YMAESGYLEPLQSHLVEGSEEMQMEMVGYLAELIQEQELTIDINGSTSGVLIKMVHSCNT 471
MAE+G LEPL + L+EGS E Q+ + L +++ +L ++ G+L V T
Sbjct: 286 QMAENGRLEPLLNLLIEGSPEKQLRIASSLEKIVLSNDLK-NLVAQRVGLLFAGVVENGT 344
Query: 472 V-ARKAALDVLVQLSSHRPNSKTLVEAGVVPVMVEELFIRKVDDEPLSYKAMAAAVLANV 530
+ A++ A VL +S++ ++K L+E G++ + L + V P + AAAVL+N+
Sbjct: 345 LPAKEVAFKVLDHISTNTESAKVLIEDGILLPLFRVLSVDGVKFLPPRLQEAAAAVLSNL 404
Query: 531 VESGIDPDNTVVNKEGHVLTSKYSIYNFVHMLKCFMPDELNLSIIRXXXXXXXXXXXXXX 590
V GID TV + S+ +++ +H++ P + ++
Sbjct: 405 VACGID-FGTVPLDGNRTIVSEDIVHSLLHLISNTSPP-IQCKLLEIFVMLSSSTTTVLS 462
Query: 591 XXXXXRENHRGHSIVELMSSWTEALGVASTRLLITLSAHMGHTIAERLCKTQGQPRRLVR 650
R + ++V+ + S + AS +LL +S M H IA+ L + LVR
Sbjct: 463 IISAIRSSGAITNLVQFVESDHQESRAASIKLLCKISFDMDHEIAQVLRSSPTLLGCLVR 522
Query: 651 SIFRAGRAAITERHAAAVTLLSRLPYRNVSLNLALVQEGAVPAILRGIEEMGSGAARMTT 710
+ + A + AA+ +L+ LP R+ L + L+++GA I R + + R T
Sbjct: 523 IV--SENDANADEQDAALQILANLPKRDRRLTMELMEQGAFKYIARKVLNI----CRRGT 576
Query: 711 SRHAA--PYMEGLVGTLVRLTATLY-NPDVLKAAMDHDFXXXXXXXXXXXXXXXEVQRLA 767
+ + +EGLV L R+T L P + A +++ VQ L+
Sbjct: 577 ANNIVDNTMLEGLVKVLARITYILREEPRCVALAREYNLASLFTSLLRLNGLDG-VQLLS 635
Query: 768 AVGLENLSYHSIKLSXXXXXXXXXXXXKKMTILKRLKDARVHNHSS-----SKNPP-LNV 821
A L NLS S + MT + H S K PP + +
Sbjct: 636 AKALVNLSVES----------------RYMTGTPNFDE---HEQKSGLTWFGKKPPGIQL 676
Query: 822 CPVHRGVCTPATTFXXXXXXXXXXXXXXXXNDDARVVDAALGALCTLVDDRVDVEKAVVA 881
C VH G+C+ F + + +VV+A+L ALCTL+ D V++ + V
Sbjct: 677 CRVHSGICSIRDNFCILEGKAVERLVVCLSHQNKKVVEASLAALCTLLGDGVEITEGVSV 736
Query: 882 LAGQGAARRVLAALRQHRGNSLWHRCFSVVEKLLVHGDDVCVREVTGDRMLPTALVSAFH 941
L A + L+ + +L R VE++L +++ + + DR L +ALV AF
Sbjct: 737 LYMANAVEPIFEILKGNPTGTLQQRVTWAVERIL-RAENI-AKAASSDRGLSSALVHAFQ 794
Query: 942 RGDANAKQAAESILRRLHKMPDYS 965
GD+ ++ AE+ L+ ++K+P +S
Sbjct: 795 NGDSRTRRIAEASLKHINKLPTFS 818
>Os01g0651900
Length = 190
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 75/140 (53%), Gaps = 47/140 (33%)
Query: 503 MVEELFIRKVDDEPLSYKAMAAAVLANVVESGIDPDNTVVNKEGHVLTSKYSIYNFVHML 562
MVEEL+IRKVDDE L YKAMAAAVLANVVES IDPD TVVNKEGHVLTSK
Sbjct: 1 MVEELYIRKVDDEALPYKAMAAAVLANVVESSIDPDTTVVNKEGHVLTSK---------- 50
Query: 563 KCFMPDELNLSIIRXXXXXXXXXXXXXXXXXXXRENHRGHSIVELMSSWTEALGVASTRL 622
ENHRGHSIVEL + +
Sbjct: 51 ----------------------------------ENHRGHSIVELPNG---SARRRRDEA 73
Query: 623 LITLSAHMGHTIAERLCKTQ 642
LS HMGHTIAERLCKTQ
Sbjct: 74 ARHLSMHMGHTIAERLCKTQ 93
>Os04g0455050
Length = 87
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 73/128 (57%), Gaps = 46/128 (35%)
Query: 480 VLVQLSSHRPNSKTLVEAGVVPVMVEELFIRKVDDEPLSYKAMAAAVLANVVESGIDPDN 539
+L++L SHRPNSKTLVE V MVEEL+IRKVDDE L YKAMAAAV ANVVES IDPD
Sbjct: 1 MLIELFSHRPNSKTLVEVVPV--MVEELYIRKVDDEALRYKAMAAAVPANVVESSIDPDT 58
Query: 540 TVVNKEGHVLTSKYSIYNFVHMLKCFMPDELNLSIIRXXXXXXXXXXXXXXXXXXXRENH 599
TVVNKEGHVLTSK ENH
Sbjct: 59 TVVNKEGHVLTSK--------------------------------------------ENH 74
Query: 600 RGHSIVEL 607
+GHSIVEL
Sbjct: 75 QGHSIVEL 82
>Os02g0732200 U box domain containing protein
Length = 637
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 145/329 (44%), Gaps = 27/329 (8%)
Query: 176 CPLTNQVMTDPVLTESGVTYERRAIEEHFERFADSSENVICPVTKMPLQSKTLMNNASLK 235
CP++ ++M DPV+ +G TYER I+ R+ D N CP T++ LQ+ TL N L+
Sbjct: 268 CPISLELMRDPVIVSTGQTYERAFIQ----RWIDCG-NRTCPKTQLKLQNITLTPNYVLR 322
Query: 236 SVIAEWT----------MRNEAM-------RIRIARTALSLSSTEAMVLE-AIHELKSLA 277
S+I +W +N+ R+ I +LSS+ + A E++SLA
Sbjct: 323 SLILQWCEEKGIEPPTRSKNDGAYLEVGGERVAIETLVRNLSSSSLDERKSAAAEIRSLA 382
Query: 278 KLRGKNREQMHKIGVTRLLARLLDNHNVQIRHSALELLCFLVEDEEGKDIIGKTKAIART 337
K NR + + G L +LL + +++ + A+ L L ++ K++I AI
Sbjct: 383 KKSTDNRILLAESGAISALVKLLSSKDLKTQEHAVTALLNLSIYDQNKELIVVAGAIVPI 442
Query: 338 IKLLSTNGTDERHAAISFXXXXXXXXXXXXDIGSTAGSILILTTMRINDSDDPIAAQKAG 397
I++L G + R A + IGST G+I L + S P + A
Sbjct: 443 IQVLRKGGMEARENAAAAIFSLSLIDDNKITIGSTPGAIEALVELL--QSGSPRGRKDAA 500
Query: 398 EVLKNLEKCSKNIKYMAESGYLEPLQSHLVEGSEEMQM-EMVGYLAELIQEQELTIDING 456
L NL N +G L PL L + S + E + L+ L+ E I I
Sbjct: 501 TALFNLCIYQANKVRAVRAGILAPLIQMLQDSSRNGAIDEALTILSVLVSHHECKIAIAK 560
Query: 457 STS-GVLIKMVHSCNTVARKAALDVLVQL 484
+ + LI ++ S ++ A +L+ L
Sbjct: 561 AHAIPFLIDLLRSSQARNKENAAAILLAL 589
>Os01g0948500 Armadillo-like helical domain containing protein
Length = 672
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 109/213 (51%), Gaps = 8/213 (3%)
Query: 323 EGKDIIGKTKAIARTIKLLSTNGTDERHAAISFXXXXXXXXXXXXDIGSTAGSILILTTM 382
E K+ + +A++ ++ LS + DE AI+ IG GSI++L T+
Sbjct: 85 ESKERLASIEALSSIVRSLSRD-VDETREAIALLLDLSDIPQVRQRIGRIKGSIVMLVTL 143
Query: 383 RINDSDDPIAAQKAGEVLKNLEKCSKNIKYMAESGYLEPLQSHLVEGSEEMQMEMVGYLA 442
R ++ +P A ++L L +N+ MAE+GY PL +L EGS+ ++ M ++
Sbjct: 144 R--NAHEPGTHDDAEKLLHMLSSNPQNVLLMAEAGYFRPLIHYLKEGSDMNKILMATAIS 201
Query: 443 ELIQEQELTIDINGSTSGV--LIKMVHSCNTVARKAALDVLVQLSSHRPNSKTLVEAGVV 500
++ + + + G V L++M S N A+ +AL L+ LSS N++ L+ +G+
Sbjct: 202 KMFLSEPMKSSL-GEDGAVEPLVEMFKSGNLEAKHSALGALLNLSSSLQNAEILINSGIT 260
Query: 501 PVMVEELFIRKVDDEPLSYKAMAAAVLANVVES 533
+++ LF V ++ + A+A+LA + +S
Sbjct: 261 GPLLQLLF--SVTSVLMTLREPASAILAAIAQS 291
>Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical
U-box domain protein 14)
Length = 611
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 143/339 (42%), Gaps = 30/339 (8%)
Query: 170 LYDALFCPLTNQVMTDPVLTESGVTYERRAIEEHFERFADSSENVICPVTKMPLQSKTLM 229
+ D CP++ ++M DPV+ SG TYER I++ + S + CP T+ PL +L
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLD-----SGHKTCPKTQQPLSHTSLT 282
Query: 230 NNASLKSVIAEWTMRN------EAMRIRIARTALSLSSTEAMVLEAIHELKS-------- 275
N LKS+I++W N R + A S A ++ ++ L+S
Sbjct: 283 PNFVLKSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRA 342
Query: 276 -------LAKLRGKNREQMHKIGVTRLLARLLDNHNVQIRHSALELLCFLVEDEEGKDII 328
LAK NR + + G LL LL + + + + A+ L L E K I
Sbjct: 343 AAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASI 402
Query: 329 GKTKAIARTIKLLSTNGTDERHAAISFXXXXXXXXXXXXDIGSTAGSILILTTMRINDSD 388
+ AI + +++L T + R A + IG+ AG+I L + + S
Sbjct: 403 VDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGA-AGAIPPLINLLCDGS- 460
Query: 389 DPIAAQKAGEVLKNLEKCSKNIKYMAESGYLEPLQSHLVEGSEEMQMEMVGYLAELIQEQ 448
P + A + NL N ++G + L + LV+ + M E + L+ L
Sbjct: 461 -PRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNP 519
Query: 449 ELTIDINGSTS-GVLIKMVHSCNTVARKAALDVLVQLSS 486
E I I S L++++ + + R+ A +L L S
Sbjct: 520 EGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCS 558
>Os02g0738200 U box domain containing protein
Length = 456
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 35/201 (17%)
Query: 172 DALFCPLTNQVMTDPVLTESGVTYERRAIEEHFERFADSSENVICPVTKMPLQSKTLMNN 231
D CP++ +M DPV +G+TY+R +E ER + CPVT PL+ + L+ N
Sbjct: 45 DHFLCPISLDMMRDPVTAPTGITYDRDGVEVWLERGRPT-----CPVTGRPLRPEELVPN 99
Query: 232 ASLKSVIAEWTMRNEAMRI-RIARTALSLSSTEAM-VLEAIH----------------EL 273
+ + +I EW + N A+ + R+ + +S+ +A +LE +
Sbjct: 100 HATRRMIQEWCVANRALGVERVPTPRVPVSAADAREILEGVAAAARRGDAAACGRMVARA 159
Query: 274 KSLAKLRGKNREQMHKIGVTRLLARLLD-------NHNVQIRHSALE-----LLCFLVED 321
++L K +NR + G R LA + + R ALE L+ F D
Sbjct: 160 RALGKESERNRRCLASAGAERALALAFSRLAAASTDQQAEARACALEEILAALVVFFPLD 219
Query: 322 EEGKDIIGKTKAIARTIKLLS 342
EE + I ++ + +LS
Sbjct: 220 EESRRCIASPPSLDALVSILS 240
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.132 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 27,589,762
Number of extensions: 1018021
Number of successful extensions: 2582
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 2567
Number of HSP's successfully gapped: 15
Length of query: 973
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 863
Effective length of database: 11,292,261
Effective search space: 9745221243
Effective search space used: 9745221243
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 161 (66.6 bits)