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Os02g0727300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : U box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.33 (0.0206) R2 : 0.00429
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0607 (0.0433) R2dN8 : 0.00554 R2N8 : 0.00429
σ : 0.387
deviance : 68.8
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.34 0.343 9.26 0.521 0.185 -0.768 0.0964 2.36 0.171 5.24 26.5 1306 -- --
55.42 0.347 9.32 -0.0269 0.166 -0.509 0.0362 -- 0.116 6.31 25.78 5706 -- --
53.36 0.34 9.26 0.522 0.186 -0.768 -- 2.38 0.17 5.23 26.52 1304 -- --
55.04 0.346 9.33 -0.0696 0.177 -0.518 -- -- 0.0434 6 26.82 5611 -- --
54.44 0.344 9.27 0.482 -- -0.888 -- 2.56 0.165 -- 26.62 1857 -- --
66.13 0.381 9.33 -0.231 0.158 -- 0.0449 -- 0.0327 6.88 -- -- -- --
66.14 0.381 9.33 -0.23 0.158 -- -- -- 0.0325 6.86 -- -- -- --
56.77 0.351 9.34 -0.0556 -- -0.501 -- -- 0.0358 -- 27.1 5558 -- --
55.09 0.346 9.33 -- 0.184 -0.526 -- -- 0.052 5.95 26.91 5611 -- --
67.45 0.384 9.34 -0.227 -- -- -- -- 0.0355 -- -- -- -- --
67.53 0.384 9.33 -- 0.156 -- -- -- 0.0581 6.95 -- -- -- --
56.84 0.351 9.33 -- -- -0.521 -- -- 0.0565 -- 26.7 5570 -- --
68.8 0.387 9.33 -- -- -- -- -- 0.0607 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.28 temperature 20 90 > th dose dependent rect. 15 18
2 51.73 temperature 20 10 > th dose dependent rect. 15 19
8 52.30 temperature 20 270 > th dose dependent rect. 12 21
13 52.59 temperature 20 90 > th dose dependent rect. 3 6
16 52.78 temperature 30 1440 < th dose independent rect. 14 1
17 52.79 temperature 15 270 > th dose dependent rect. 1 7
21 52.90 temperature 30 1440 > th dose independent rect. 14 1
27 53.00 wind 3 43200 > th dose dependent rect. 3 13
42 53.14 radiation 1 14400 < th dose independent rect. 23 7
43 53.14 radiation 1 14400 < th dose independent rect. 21 9
47 53.16 radiation 1 14400 > th dose independent rect. 5 1
51 53.16 radiation 1 14400 < th dose independent rect. 2 4
68 53.22 wind 9 43200 < th dose independent rect. 18 21
71 53.23 wind 3 43200 > th dose dependent sin 2 NA
83 53.32 wind 9 43200 > th dose independent rect. 19 20
86 53.33 temperature 20 270 > th dose independent rect. 1 7
91 53.37 wind 5 43200 < th dose independent rect. 2 15
97 53.41 wind 7 43200 > th dose dependent rect. 20 19
122 53.48 wind 5 43200 > th dose independent rect. 3 14
124 53.48 temperature 25 1440 > th dose dependent rect. 12 1
126 53.48 wind 7 43200 > th dose dependent rect. 2 13
145 53.53 wind 9 43200 < th dose dependent rect. 3 12
162 53.57 temperature 25 1440 > th dose dependent rect. 16 4
173 53.59 wind 3 43200 > th dose dependent rect. 20 21
180 53.61 temperature 25 1440 > th dose dependent rect. 12 9
191 53.62 temperature 25 1440 > th dose dependent rect. 12 20
207 53.65 wind 5 43200 < th dose independent sin 1 NA
257 53.71 wind 5 43200 > th dose independent sin 1 NA
327 53.77 temperature 25 1440 > th dose dependent rect. 16 16
328 53.77 wind 3 43200 > th dose dependent rect. 2 20
331 53.78 temperature 25 1440 > th dose dependent sin 16 NA
396 53.84 humidity 80 43200 > th dose independent rect. 23 2
402 53.84 wind 3 43200 > th dose dependent rect. 6 1
403 53.84 wind 1 43200 > th dose dependent rect. 9 1
424 53.87 wind 9 43200 < th dose independent rect. 24 15
425 53.87 wind 9 43200 < th dose dependent rect. 9 1
449 53.89 wind 9 43200 < th dose independent rect. 2 13
464 53.90 atmosphere 995 43200 < th dose independent rect. 13 9
465 53.90 atmosphere 995 43200 > th dose independent rect. 12 10
472 53.90 wind 9 43200 < th dose dependent sin 3 NA
486 53.91 atmosphere 995 43200 < th dose dependent rect. 15 1
516 53.93 radiation 1 4320 > th dose independent rect. 18 1
528 53.93 atmosphere 995 43200 < th dose dependent rect. 14 8
586 53.97 wind 3 43200 > th dose dependent no NA NA
644 54.01 atmosphere 995 43200 < th dose independent rect. 14 2
683 54.04 radiation 1 4320 < th dose independent rect. 18 5
715 54.05 temperature 20 720 > th dose dependent rect. 19 14
726 54.06 temperature 30 1440 < th dose independent rect. 14 20
738 54.07 wind 5 43200 < th dose independent no NA NA
739 54.07 atmosphere 995 43200 > th dose independent sin 21 NA
740 54.07 atmosphere 995 43200 > th dose independent rect. 14 1
748 54.07 wind 5 43200 < th dose independent rect. 14 23
760 54.08 radiation 1 4320 < th dose independent rect. 18 1
765 54.08 temperature 25 4320 > th dose dependent rect. 7 1
771 54.08 wind 3 43200 > th dose dependent rect. 10 23
774 54.09 temperature 25 4320 < th dose independent rect. 6 2
775 54.09 humidity 80 43200 < th dose independent rect. 22 3
787 54.09 humidity 80 43200 < th dose dependent rect. 22 1
796 54.09 wind 3 43200 > th dose dependent rect. 5 23
798 54.10 atmosphere 995 43200 < th dose independent sin 20 NA
813 54.10 wind 3 43200 > th dose dependent rect. 7 23
825 54.11 wind 5 43200 < th dose independent rect. 9 23
826 54.11 wind 5 43200 < th dose independent rect. 11 23
844 54.12 temperature 30 1440 < th dose independent rect. 24 16
865 54.13 temperature 30 1440 < th dose independent rect. 8 8
871 54.13 temperature 30 1440 < th dose independent rect. 2 14
873 54.13 temperature 30 1440 > th dose independent rect. 14 20
884 54.13 temperature 25 1440 > th dose dependent rect. 5 16
896 54.14 temperature 25 4320 > th dose independent rect. 6 2
901 54.14 temperature 30 1440 < th dose independent rect. 4 12
903 54.14 atmosphere 995 43200 > th dose independent rect. 5 13
958 54.16 wind 5 43200 > th dose independent no NA NA
964 54.16 temperature 30 1440 < th dose independent rect. 14 15
967 54.16 temperature 30 1440 < th dose independent rect. 14 17
971 54.16 wind 5 43200 > th dose independent rect. 9 23
972 54.16 wind 5 43200 > th dose independent rect. 11 23
973 54.16 wind 5 43200 > th dose independent rect. 13 23
984 54.17 temperature 30 1440 < th dose independent rect. 14 13