BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0624400 Os02g0624400|AK120845
(547 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0624400 Glycosyl transferase, family 8 protein 1019 0.0
Os04g0517400 Conserved hypothetical protein 340 2e-93
Os01g0880200 Glycosyl transferase, family 8 protein 123 4e-28
Os03g0184300 Glycosyl transferase, family 8 protein 108 1e-23
Os04g0553800 Glycosyl transferase, family 8 protein 107 2e-23
Os02g0556000 Glycosyl transferase, family 8 protein 105 8e-23
Os10g0555100 Similar to DNA chromosome 4, ESSA I CONTIG fra... 100 4e-21
>Os02g0624400 Glycosyl transferase, family 8 protein
Length = 547
Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/547 (91%), Positives = 499/547 (91%)
Query: 1 MWRRRGAPSGIGLWXXXXXXXXXXXXXXXXXXXXXKDEAYVTLLYGDEFVLGVRVLGKSI 60
MWRRRGAPSGIGLW KDEAYVTLLYGDEFVLGVRVLGKSI
Sbjct: 1 MWRRRGAPSGIGLWAALLVAAAVLAAGGGAAAAAAKDEAYVTLLYGDEFVLGVRVLGKSI 60
Query: 61 RDTDTSRDLVVLVSDGVSEYSRKLLEADGFIVKHITLLANPNQVRPTRFWGVYTKLKIFN 120
RDTDTSRDLVVLVSDGVSEYSRKLLEADGFIVKHITLLANPNQVRPTRFWGVYTKLKIFN
Sbjct: 61 RDTDTSRDLVVLVSDGVSEYSRKLLEADGFIVKHITLLANPNQVRPTRFWGVYTKLKIFN 120
Query: 121 MTSYKKVAYLDADTIVVKSIEDIFNCGKFCANLKHSERMNSGVMVVEPSETLFNDMMDKV 180
MTSYKKVAYLDADTIVVKSIEDIFNCGKFCANLKHSERMNSGVMVVEPSETLFNDMMDKV
Sbjct: 121 MTSYKKVAYLDADTIVVKSIEDIFNCGKFCANLKHSERMNSGVMVVEPSETLFNDMMDKV 180
Query: 181 NSLPSYTGGDQGFLNSYYADFANSRVYXXXXXXXXXXXXQRLSTLYNADVGLYMLANKWM 240
NSLPSYTGGDQGFLNSYYADFANSRVY QRLSTLYNADVGLYMLANKWM
Sbjct: 181 NSLPSYTGGDQGFLNSYYADFANSRVYEPNKPTTPEPETQRLSTLYNADVGLYMLANKWM 240
Query: 241 VDEKELRVIHYTLGPLKPWDWWTAWLVKPVAVWQDIRKNLEESLPGTGGGRNPHDQSVVK 300
VDEKELRVIHYTLGPLKPWDWWTAWLVKPVAVWQDIRKNLEESLPGTGGGRNPHDQSVVK
Sbjct: 241 VDEKELRVIHYTLGPLKPWDWWTAWLVKPVAVWQDIRKNLEESLPGTGGGRNPHDQSVVK 300
Query: 301 ILFSLPLFMLICGYYGSCFQTNKELLCIRSLCAFARRARYKYKSEEALPSYSTIGAASSS 360
ILFSLPLFMLICGYYGSCFQTNKELLCIRSLCAFARRARYKYKSEEALPSYSTIGAASSS
Sbjct: 301 ILFSLPLFMLICGYYGSCFQTNKELLCIRSLCAFARRARYKYKSEEALPSYSTIGAASSS 360
Query: 361 FGISHQKSHNGAHLKLPSYFGAITVLVCXXXXXXXXXXXXXXXPRQVMPWTGLLLMYEWT 420
FGISHQKSHNGAHLKLPSYFGAITVLVC PRQVMPWTGLLLMYEWT
Sbjct: 361 FGISHQKSHNGAHLKLPSYFGAITVLVCFISALISLAFAFIIIPRQVMPWTGLLLMYEWT 420
Query: 421 SVTFFLLFGSYLRVVYNWGSSSANHVGHNNLDSSENHAGAGLQRNTSDCDTDAAFYWSGM 480
SVTFFLLFGSYLRVVYNWGSSSANHVGHNNLDSSENHAGAGLQRNTSDCDTDAAFYWSGM
Sbjct: 421 SVTFFLLFGSYLRVVYNWGSSSANHVGHNNLDSSENHAGAGLQRNTSDCDTDAAFYWSGM 480
Query: 481 AILSSIALLSPTVLGITALFAKLGLMVAGGVVLASFMTYASEHLAISAFVKGQRDRNASR 540
AILSSIALLSPTVLGITALFAKLGLMVAGGVVLASFMTYASEHLAISAFVKGQRDRNASR
Sbjct: 481 AILSSIALLSPTVLGITALFAKLGLMVAGGVVLASFMTYASEHLAISAFVKGQRDRNASR 540
Query: 541 GSICFMC 547
GSICFMC
Sbjct: 541 GSICFMC 547
>Os04g0517400 Conserved hypothetical protein
Length = 279
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 159/238 (66%), Positives = 183/238 (76%)
Query: 265 WLVKPVAVWQDIRKNLEESLPGTGGGRNPHDQSVVKILFSLPLFMLICGYYGSCFQTNKE 324
WLVKPV VWQD+R+ LEESLPGTGGGR+PHDQ VVK+LF LP+ +L CGY SC QTNKE
Sbjct: 28 WLVKPVGVWQDVRQTLEESLPGTGGGRSPHDQLVVKVLFILPVLLLTCGYNQSCSQTNKE 87
Query: 325 LLCIRSLCAFARRARYKYKSEEALPSYSTIGAASSSFGISHQKSHNGAHLKLPSYFGAIT 384
LL IRSLCAFARR RYKYKSEEA PSYS +G +SS+F S+Q+ NG H KLPSYFGA+T
Sbjct: 88 LLNIRSLCAFARRDRYKYKSEEAFPSYSVMGVSSSAFSNSNQRFSNGMHSKLPSYFGALT 147
Query: 385 VLVCXXXXXXXXXXXXXXXPRQVMPWTGLLLMYEWTSVTFFLLFGSYLRVVYNWGSSSAN 444
VL C P+Q+MPWTGLLLM+EWT V+FFLLFGSYLR VY WGS AN
Sbjct: 148 VLACFMSAGVSFAFAFAIIPKQIMPWTGLLLMFEWTFVSFFLLFGSYLRFVYRWGSLDAN 207
Query: 445 HVGHNNLDSSENHAGAGLQRNTSDCDTDAAFYWSGMAILSSIALLSPTVLGITALFAK 502
HVGH+ DSSENH G N SDCD DA FYW+GMAI++ + +L PT+LG+TALFAK
Sbjct: 208 HVGHSRFDSSENHMVTGRHHNMSDCDIDATFYWTGMAIIAIVTVLLPTLLGVTALFAK 265
>Os01g0880200 Glycosyl transferase, family 8 protein
Length = 635
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 99/164 (60%), Gaps = 1/164 (0%)
Query: 36 KDEAYVTLLY-GDEFVLGVRVLGKSIRDTDTSRDLVVLVSDGVSEYSRKLLEADGFIVKH 94
+ EAY T+L+ E+V G +SIR ++RD V+LV + +S + RK LEA G+ V+
Sbjct: 304 RREAYATILHSASEYVCGAITAAQSIRQAGSTRDFVILVDETISNHHRKGLEAAGWKVRI 363
Query: 95 ITLLANPNQVRPTRFWGVYTKLKIFNMTSYKKVAYLDADTIVVKSIEDIFNCGKFCANLK 154
I + NP R Y+K +++ +T Y K+ ++DAD +++++++ +F + A
Sbjct: 364 IQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNVDFLFAMPEITATGN 423
Query: 155 HSERMNSGVMVVEPSETLFNDMMDKVNSLPSYTGGDQGFLNSYY 198
++ NSGVMV+EPS F +MD +N + SY GGDQG+LN +
Sbjct: 424 NATLFNSGVMVIEPSNCTFQLLMDHINEITSYNGGDQGYLNEIF 467
>Os03g0184300 Glycosyl transferase, family 8 protein
Length = 500
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 95/164 (57%), Gaps = 1/164 (0%)
Query: 36 KDEAYVTLLYG-DEFVLGVRVLGKSIRDTDTSRDLVVLVSDGVSEYSRKLLEADGFIVKH 94
+ EAY T+L+ D ++ G VL +SIR ++RDLV+L VS+ + L A G+ +
Sbjct: 208 RREAYATVLHSSDTYLCGAIVLAQSIRRAGSTRDLVLLHDHTVSKPALAALVAAGWTPRK 267
Query: 95 ITLLANPNQVRPTRFWGVYTKLKIFNMTSYKKVAYLDADTIVVKSIEDIFNCGKFCANLK 154
I + NP R T Y+K +++ +T Y +V ++DAD +V++ ++ +F + A
Sbjct: 268 IKRIRNPRAERGTYNEYNYSKFRLWQLTDYDRVVFVDADILVLRDLDALFGFPQLTAVGN 327
Query: 155 HSERMNSGVMVVEPSETLFNDMMDKVNSLPSYTGGDQGFLNSYY 198
NSGVMV+EPS+ F ++ + ++ SY GGDQGFLN +
Sbjct: 328 DGSLFNSGVMVIEPSQCTFQSLIRQRRTIRSYNGGDQGFLNEVF 371
>Os04g0553800 Glycosyl transferase, family 8 protein
Length = 428
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 7/238 (2%)
Query: 48 EFVLGVRVLGKSIRDTDTSRDLVVLVSDGVSEYSRKLLEADGFIVKHITLLANPNQVRPT 107
EF + RV+ +S+ + D VV+ S V + L+ DG V + L NP + +
Sbjct: 11 EFYVATRVMMRSLGRLGSDADRVVIASVDVPPRWVQALKDDGVKVVSVENLKNPYEKQGN 70
Query: 108 ---RFWGVYTKLKIFNMTSYKKVAYLDADTIVVKSIEDIFNCGKFCANLKHSERMNSGVM 164
RF KL +++ SY +V LD+D I +++ +++F CG+FCA + ++G+
Sbjct: 71 FNMRFKLTLNKLYAWSLVSYDRVVMLDSDNIFLQNTDELFQCGQFCAVFINPCIFHTGLF 130
Query: 165 VVEPSETLFNDMMDKVN-SLPSYTGGDQGFLNSYYADFANSRVYXXXXXXXXXXXXQRLS 223
V++PS +F +M+ ++ + G DQGFL SY+ D + ++ RL
Sbjct: 131 VLQPSMDVFKNMLHELAVGRDNPDGADQGFLASYFPDLLDRPMFHPPVNGTKLEGTYRLP 190
Query: 224 TLYNADVGLYMLANKWMVDEKELRVIHYTLGP-LKPWDWWTAWLVKPVAV-WQDIRKN 279
Y D Y L +W + VI + P KPW WW+ W V P+ + W + R+
Sbjct: 191 LGYQMDASYYYLKLRWSIPCGPNSVITFPSAPWFKPWYWWS-WPVLPLGLSWHEQRRE 247
>Os02g0556000 Glycosyl transferase, family 8 protein
Length = 654
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 8/172 (4%)
Query: 36 KDEAYVTLLYGDE-FVLGVRVLGKSIR-------DTDTSRDLVVLVSDGVSEYSRKLLEA 87
+ EAY T+L+ +E + G V +SIR ++ RD+V LV + +S R LEA
Sbjct: 313 RREAYATILHSEELYACGALVAAQSIRMASASGAPSEPERDMVALVDETISARHRGALEA 372
Query: 88 DGFIVKHITLLANPNQVRPTRFWGVYTKLKIFNMTSYKKVAYLDADTIVVKSIEDIFNCG 147
G+ V+ I + NP Y+K ++++T Y +V +LDAD +V + + +F
Sbjct: 373 AGWKVRAIRRVRNPRAAADAYNEWNYSKFWLWSLTEYDRVVFLDADLLVQRPMSPLFAMP 432
Query: 148 KFCANLKHSERMNSGVMVVEPSETLFNDMMDKVNSLPSYTGGDQGFLNSYYA 199
+ A H NSGVMVVEP +MD + + SY GGDQG+LN ++
Sbjct: 433 EVSATANHGTLFNSGVMVVEPCGCTLRLLMDHIADIDSYNGGDQGYLNEVFS 484
>Os10g0555100 Similar to DNA chromosome 4, ESSA I CONTIG fragment NO. 6
(Glucosyltransferase like protein)
Length = 492
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 14/253 (5%)
Query: 38 EAYVTLLYGD-----EFVLGVRVLGKSIRDTDTSRDLVVLVS-DGVSEYSRKLLEADGFI 91
AY ++Y EF + VRV+ +S+ D V++ S D +++ R + E DG
Sbjct: 56 HAYAAMMYMGTPRDYEFYVAVRVMMRSLARIGADADRVLIASADVPADWVRAMREEDGMR 115
Query: 92 VKHITLLANPNQVR----PTRFWGVYTKLKIFNMTSYKKVAYLDADTIVVKSIEDIFNCG 147
V + + NP + RF KL + + Y++V +D+D I ++ +++F CG
Sbjct: 116 VVLVENMKNPYESNLGGINRRFKLTLNKLYAWTLVDYERVVMIDSDNIFLQKTDELFQCG 175
Query: 148 KFCANLKHSERMNSGVMVVEPSETLFNDMMDKVN-SLPSYTGGDQGFLNSYYADFANSRV 206
+FCA + ++G+ V++PS +F M+ + + G DQGFL Y D + +
Sbjct: 176 QFCAVFINPCYFHTGLFVLQPSMDVFKGMLHDLEIGRANSDGADQGFLVGCYPDLLDRPM 235
Query: 207 YXXXXXXXXXXXXQRLSTLYNADVGLYMLANKWMVDEKELRVIHYTLGP-LKPWDWWTAW 265
+ RL Y D Y L W V VI + P KPW WW+ W
Sbjct: 236 FHPPENGSKLNGTYRLPLGYQMDASYYYLKLHWHVPCGPNSVITFPSAPWFKPWYWWS-W 294
Query: 266 LVKPVAV-WQDIR 277
+ P+ + W R
Sbjct: 295 PILPLGLSWHKQR 307
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.136 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,926,646
Number of extensions: 661649
Number of successful extensions: 1351
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1347
Number of HSP's successfully gapped: 7
Length of query: 547
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 441
Effective length of database: 11,501,117
Effective search space: 5071992597
Effective search space used: 5071992597
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)