Os02g0556000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 8 protein.
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Os02g0556000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 8 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 415.42 | 0.958 | 3.42 | 0.81 | 1.86 | -2.1 | -0.956 | -0.648 | 0.408 | 5.12 | 88.73 | 748 | 18.8 | 6.52 |
| 416.27 | 0.95 | 3.41 | 0.869 | 1.88 | -2.1 | -1.17 | -- | 0.406 | 5.11 | 88.58 | 747 | 18.9 | 6.41 |
| 417.03 | 0.951 | 3.41 | 0.779 | 1.83 | -2.05 | -- | -1.08 | 0.401 | 5.13 | 88.56 | 747 | 18.9 | 6.32 |
| 420.24 | 0.955 | 3.41 | 0.892 | 1.85 | -2.06 | -- | -- | 0.414 | 5.07 | 88.59 | 747 | 18.8 | 6.33 |
| 445.67 | 0.983 | 3.43 | 0.72 | -- | -2.24 | -- | -1.66 | 0.455 | -- | 85.01 | 47520 | 18.8 | 6.37 |
| 513.4 | 1.06 | 3.5 | 1.19 | 0.674 | -- | -0.413 | -- | 0.0943 | 9.08 | -- | -- | -- | -- |
| 513.98 | 1.06 | 3.51 | 1.17 | 0.675 | -- | -- | -- | 0.0943 | 9.15 | -- | -- | -- | -- |
| 438.67 | 0.975 | 3.44 | 0.941 | -- | -2.62 | -- | -- | 0.555 | -- | 85.71 | 43349 | 18.9 | 6.01 |
| 440.89 | 0.978 | 3.42 | -- | 1.95 | -2.19 | -- | -- | 0.393 | 5 | 88 | 752 | 18.8 | 6.37 |
| 540.32 | 1.09 | 3.52 | 1.17 | -- | -- | -- | -- | 0.0978 | -- | -- | -- | -- | -- |
| 550.23 | 1.1 | 3.53 | -- | 0.676 | -- | -- | -- | -0.0363 | 9.02 | -- | -- | -- | -- |
| 450.45 | 0.988 | 3.47 | -- | -- | -2.17 | -- | -- | 0.281 | -- | 83.84 | 33407 | 18.2 | 7.13 |
| 576.48 | 1.12 | 3.55 | -- | -- | -- | -- | -- | -0.0321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 411.67 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 10 |
| 2 | 411.72 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 10 |
| 30 | 413.15 | humidity | 80.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 33 | 413.24 | humidity | 80.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 44 | 413.63 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 51 | 413.77 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 57 | 413.84 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 58 | 413.86 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 78 | 414.16 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 16 | 9 |
| 86 | 414.24 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 145 | 414.87 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 157 | 414.96 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 159 | 414.97 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 16 | 7 |
| 229 | 415.54 | humidity | 90.0 | 43200 | < th | dose dependent | sin | 14 | NA |
| 269 | 415.77 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 312 | 416.08 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 319 | 416.12 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 20 |
| 444 | 416.56 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 445 | 416.56 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 458 | 416.58 | humidity | 50.0 | 43200 | > th | dose dependent | sin | 14 | NA |
| 485 | 416.64 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 15 | 16 |
| 493 | 416.66 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 23 |
| 502 | 416.70 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 23 |
| 552 | 416.85 | humidity | 80.0 | 43200 | > th | dose independent | no | NA | NA |
| 597 | 416.97 | humidity | 80.0 | 43200 | < th | dose independent | no | NA | NA |
| 653 | 417.14 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 657 | 417.14 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 710 | 417.29 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 711 | 417.29 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 718 | 417.31 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 719 | 417.31 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 23 |
| 721 | 417.31 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 730 | 417.34 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 3 |
| 731 | 417.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 3 |
| 762 | 417.41 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 3 |
| 764 | 417.41 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 769 | 417.42 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 771 | 417.42 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 831 | 417.59 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 853 | 417.64 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 866 | 417.69 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 931 | 417.85 | radiation | 10.0 | 43200 | < th | dose dependent | sin | 16 | NA |