Os01g0880200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 8 protein.
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Os01g0880200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 8 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 231.77 | 0.715 | 11 | -3.69 | 3.87 | 1.93 | -0.178 | 1.45 | -1.07 | 1.31 | 1.513 | 11467 | -- | -- |
| 236.35 | 0.716 | 11 | -3.84 | 3.92 | 1.68 | -0.14 | -- | -1.04 | 1.27 | 1.585 | 11459 | -- | -- |
| 231.85 | 0.709 | 11 | -3.7 | 3.86 | 1.93 | -- | 1.41 | -1.07 | 1.31 | 1.51 | 11456 | -- | -- |
| 235.43 | 0.715 | 11 | -3.99 | 3.91 | 1.7 | -- | -- | -1.05 | 1.29 | 1.59 | 11460 | -- | -- |
| 588.69 | 1.14 | 10.8 | -3.38 | -- | -2.5 | -- | 0.835 | -0.469 | -- | 1.51 | 11456 | -- | -- |
| 310.26 | 0.826 | 10.9 | -3.55 | 3.99 | -- | -0.000317 | -- | -0.632 | 1.3 | -- | -- | -- | -- |
| 310.26 | 0.825 | 10.9 | -3.55 | 3.99 | -- | -- | -- | -0.632 | 1.3 | -- | -- | -- | -- |
| 581.8 | 1.13 | 10.8 | -3.42 | -- | -2.52 | -- | -- | -0.435 | -- | 2.189 | 12686 | -- | -- |
| 520.13 | 1.06 | 10.9 | -- | 3.84 | 2.01 | -- | -- | -0.534 | 1.39 | 39.95 | 29419 | -- | -- |
| 1294.24 | 1.68 | 10.8 | -3.4 | -- | -- | -- | -- | -0.55 | -- | -- | -- | -- | -- |
| 643.31 | 1.19 | 10.8 | -- | 3.93 | -- | -- | -- | -0.236 | 1.27 | -- | -- | -- | -- |
| 891.13 | 1.39 | 10.7 | -- | -- | -2.52 | -- | -- | -0.0552 | -- | 2.189 | 12686 | -- | -- |
| 1598.99 | 1.87 | 10.8 | -- | -- | -- | -- | -- | -0.172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 222.00 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 3 | 222.69 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 4 | 222.71 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 6 | 222.76 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 16 | 223.16 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 19 | 223.71 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 23 | 224.35 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 25 | 224.40 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 31 | 224.61 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 34 | 224.65 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 52 | 224.90 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 56 | 225.00 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 73 | 225.61 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 5 |
| 75 | 225.62 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 76 | 225.67 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 93 | 226.21 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 101 | 226.44 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 107 | 226.74 | wind | 5.0 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 108 | 226.84 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 123 | 226.89 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 124 | 226.90 | wind | 5.0 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 125 | 226.90 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 13 |
| 126 | 226.92 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 137 | 227.09 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 13 |
| 157 | 227.52 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 166 | 227.65 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 174 | 227.78 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 3 | 6 |
| 181 | 227.84 | wind | 5.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 186 | 227.87 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 24 | 13 |
| 204 | 228.18 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 207 | 228.20 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 24 | 10 |
| 224 | 228.44 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 3 | 9 |
| 225 | 228.46 | wind | 5.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 236 | 228.61 | wind | 5.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 256 | 228.79 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 340 | 229.69 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 18 | 12 |
| 366 | 229.97 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 372 | 230.00 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 377 | 230.02 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 381 | 230.04 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 392 | 230.11 | radiation | 10.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 394 | 230.11 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 414 | 230.27 | wind | 3.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 424 | 230.36 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 18 |
| 434 | 230.46 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 438 | 230.50 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 439 | 230.50 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 3 |
| 463 | 230.64 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 501 | 230.93 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 515 | 230.97 | humidity | 60.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 530 | 231.11 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 541 | 231.15 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 549 | 231.20 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 560 | 231.26 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 563 | 231.26 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 567 | 231.26 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 5 |
| 569 | 231.27 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 577 | 231.31 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 590 | 231.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 602 | 231.47 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 616 | 231.51 | radiation | 30.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 625 | 231.53 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 632 | 231.57 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 637 | 231.60 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 672 | 231.66 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 12 | 7 |
| 675 | 231.68 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 678 | 231.69 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 2 | 7 |
| 694 | 231.74 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 12 | 7 |
| 697 | 231.74 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 12 | 7 |
| 712 | 231.79 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 9 |
| 726 | 231.88 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 2 | 10 |
| 729 | 231.89 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 12 |
| 738 | 231.94 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 817 | 232.37 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 831 | 232.47 | humidity | 60.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 842 | 232.52 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 843 | 232.53 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 870 | 232.62 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 874 | 232.62 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 8 |
| 945 | 232.92 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 14 |
| 954 | 232.95 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 960 | 232.96 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 12 |
| 971 | 232.98 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 974 | 232.98 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 10 |