Os02g0624400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 8 protein.
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Os02g0624400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 8 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 293.12 | 0.804 | 4.86 | -0.201 | 0.683 | 0.788 | -0.763 | 2.2 | -0.182 | 9.05 | 29.76 | 4868 | -- | -- |
| 293.76 | 0.798 | 4.9 | -0.64 | 0.682 | 1.04 | -0.805 | -- | -0.191 | 9.05 | 29.88 | 4870 | -- | -- |
| 295.03 | 0.8 | 4.86 | -0.214 | 0.684 | 0.789 | -- | 2.29 | -0.185 | 9.26 | 29.8 | 4904 | -- | -- |
| 295.73 | 0.801 | 4.9 | -0.666 | 0.687 | 1.06 | -- | -- | -0.192 | 9.21 | 29.9 | 4866 | -- | -- |
| 320.8 | 0.834 | 4.87 | -0.192 | -- | 0.743 | -- | 2.51 | -0.17 | -- | 29.8 | 4453 | -- | -- |
| 335.68 | 0.859 | 4.94 | -0.346 | 0.604 | -- | -0.948 | -- | -0.342 | 8.84 | -- | -- | -- | -- |
| 338.58 | 0.862 | 4.94 | -0.375 | 0.604 | -- | -- | -- | -0.341 | 9.14 | -- | -- | -- | -- |
| 321.31 | 0.835 | 4.91 | -0.635 | -- | 1.04 | -- | -- | -0.15 | -- | 30.34 | 4363 | -- | -- |
| 306.8 | 0.816 | 4.89 | -- | 0.682 | 0.935 | -- | -- | -0.137 | 9.3 | 29.88 | 4906 | -- | -- |
| 359.67 | 0.886 | 4.95 | -0.377 | -- | -- | -- | -- | -0.338 | -- | -- | -- | -- | -- |
| 342.29 | 0.865 | 4.93 | -- | 0.604 | -- | -- | -- | -0.299 | 9.18 | -- | -- | -- | -- |
| 331.53 | 0.848 | 4.9 | -- | -- | 0.92 | -- | -- | -0.102 | -- | 30.34 | 4426 | -- | -- |
| 363.42 | 0.89 | 4.94 | -- | -- | -- | -- | -- | -0.296 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 272.65 | humidity | 50 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 2 | 272.92 | humidity | 90 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 6 | 273.56 | humidity | 80 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 7 | 274.09 | humidity | 70 | 14400 | > th | dose dependent | rect. | 8 | 2 |
| 9 | 274.17 | wind | 3 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 11 | 274.17 | humidity | 50 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 12 | 274.28 | humidity | 60 | 14400 | > th | dose dependent | rect. | 6 | 7 |
| 15 | 274.37 | humidity | 60 | 14400 | > th | dose dependent | rect. | 7 | 15 |
| 17 | 274.39 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 37 | 274.57 | humidity | 70 | 14400 | > th | dose independent | rect. | 13 | 20 |
| 66 | 274.86 | humidity | 70 | 14400 | > th | dose independent | rect. | 20 | 22 |
| 77 | 274.93 | humidity | 90 | 14400 | < th | dose dependent | rect. | 6 | 15 |
| 93 | 274.99 | humidity | 70 | 14400 | > th | dose independent | rect. | 5 | 13 |
| 95 | 274.99 | humidity | 70 | 14400 | > th | dose independent | rect. | 23 | 19 |
| 100 | 275.00 | humidity | 70 | 14400 | > th | dose independent | rect. | 7 | 11 |
| 128 | 275.14 | humidity | 50 | 14400 | > th | dose dependent | sin | 22 | NA |
| 147 | 275.23 | humidity | 70 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 194 | 275.44 | humidity | 50 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 226 | 275.51 | humidity | 90 | 14400 | < th | dose dependent | sin | 22 | NA |
| 326 | 275.83 | humidity | 70 | 14400 | > th | dose independent | rect. | 13 | 11 |
| 334 | 275.84 | humidity | 70 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 339 | 275.85 | humidity | 70 | 14400 | > th | dose independent | sin | 21 | NA |
| 557 | 276.49 | humidity | 70 | 14400 | > th | dose independent | rect. | 7 | 15 |
| 565 | 276.49 | humidity | 70 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 577 | 276.50 | humidity | 70 | 14400 | > th | dose independent | no | NA | NA |
| 597 | 276.50 | humidity | 70 | 14400 | > th | dose independent | rect. | 1 | 22 |
| 740 | 276.82 | humidity | 70 | 14400 | < th | dose independent | rect. | 12 | 6 |
| 755 | 276.86 | humidity | 80 | 14400 | < th | dose dependent | rect. | 12 | 3 |
| 774 | 276.91 | humidity | 80 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 779 | 276.91 | humidity | 50 | 14400 | > th | dose dependent | rect. | 16 | 22 |
| 791 | 276.95 | humidity | 80 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 825 | 277.03 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 835 | 277.07 | humidity | 70 | 14400 | < th | dose independent | rect. | 13 | 20 |
| 864 | 277.14 | humidity | 80 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 872 | 277.16 | humidity | 50 | 14400 | > th | dose dependent | no | NA | NA |
| 902 | 277.25 | humidity | 50 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 949 | 277.39 | humidity | 50 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 971 | 277.48 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 979 | 277.51 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 997 | 277.56 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 13 |