Os03g0184300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 8 protein.
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Os03g0184300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 8 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 407.71 | 0.949 | 7.76 | -5.32 | 0.834 | 2.68 | 0.681 | -5.27 | -0.396 | 20.9 | 24.73 | 1351 | -- | -- |
| 417.77 | 0.952 | 7.62 | -3.91 | 0.774 | 2.32 | 0.418 | -- | -0.163 | 20.4 | 23.28 | 1259 | -- | -- |
| 408.32 | 0.941 | 7.75 | -5.22 | 0.799 | 2.75 | -- | -4.95 | -0.401 | 20.3 | 24.44 | 1294 | -- | -- |
| 418.29 | 0.953 | 7.62 | -3.93 | 0.791 | 2.31 | -- | -- | -0.171 | 20.3 | 23.28 | 1258 | -- | -- |
| 431.28 | 0.967 | 7.81 | -6.04 | -- | 3.32 | -- | -8.56 | -0.512 | -- | 25.15 | 2329 | -- | -- |
| 596.53 | 1.15 | 7.52 | -3.13 | 0.933 | -- | 0.87 | -- | 0.269 | 22.1 | -- | -- | -- | -- |
| 599.41 | 1.15 | 7.52 | -3.16 | 0.933 | -- | -- | -- | 0.268 | 21.9 | -- | -- | -- | -- |
| 438.65 | 0.975 | 7.61 | -3.87 | -- | 2.61 | -- | -- | -0.183 | -- | 22.6 | 1009 | -- | -- |
| 783.15 | 1.3 | 7.46 | -- | 0.726 | 1.31 | -- | -- | 0.63 | 21 | 28.3 | 1234 | -- | -- |
| 651.57 | 1.19 | 7.49 | -3.15 | -- | -- | -- | -- | 0.268 | -- | -- | -- | -- | -- |
| 863.01 | 1.37 | 7.44 | -- | 0.924 | -- | -- | -- | 0.62 | 21.6 | -- | -- | -- | -- |
| 813.71 | 1.33 | 7.44 | -- | -- | 1.72 | -- | -- | 0.517 | -- | 25.03 | 1009 | -- | -- |
| 913.65 | 1.41 | 7.42 | -- | -- | -- | -- | -- | 0.618 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 391.19 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 5 | 393.12 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 6 | 393.45 | wind | 7 | 43200 | > th | dose dependent | rect. | 8 | 13 |
| 7 | 394.18 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 8 | 394.32 | wind | 7 | 43200 | > th | dose dependent | rect. | 4 | 17 |
| 13 | 394.46 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 21 |
| 17 | 394.81 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 19 | 394.83 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 22 |
| 20 | 395.05 | wind | 7 | 43200 | > th | dose dependent | sin | 22 | NA |
| 25 | 395.21 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 41 | 395.69 | wind | 7 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 47 | 395.94 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 18 |
| 53 | 396.38 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 17 |
| 73 | 396.91 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 90 | 397.51 | wind | 7 | 43200 | > th | dose dependent | rect. | 24 | 16 |
| 98 | 397.79 | wind | 7 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 110 | 397.95 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 14 |
| 116 | 398.09 | wind | 9 | 43200 | > th | dose independent | rect. | 8 | 13 |
| 152 | 398.94 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 17 |
| 154 | 399.04 | wind | 7 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 168 | 399.32 | wind | 7 | 43200 | > th | dose dependent | no | NA | NA |
| 175 | 399.56 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 178 | 399.61 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 14 |
| 180 | 399.65 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 189 | 399.73 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 22 |
| 209 | 400.00 | wind | 7 | 43200 | > th | dose independent | sin | 2 | NA |
| 217 | 400.14 | wind | 9 | 43200 | > th | dose dependent | sin | 16 | NA |
| 233 | 400.47 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 245 | 400.67 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 18 |
| 249 | 400.72 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 22 |
| 253 | 400.79 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 254 | 400.79 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 22 |
| 261 | 400.89 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 268 | 400.98 | wind | 9 | 43200 | < th | dose independent | sin | 22 | NA |
| 300 | 401.34 | wind | 9 | 43200 | > th | dose independent | rect. | 4 | 17 |
| 314 | 401.50 | wind | 7 | 43200 | < th | dose independent | sin | 2 | NA |
| 319 | 401.51 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 23 |
| 336 | 401.69 | wind | 9 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 409 | 402.44 | wind | 9 | 43200 | < th | dose independent | no | NA | NA |
| 470 | 403.07 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 502 | 403.35 | wind | 9 | 43200 | > th | dose independent | sin | 22 | NA |
| 520 | 403.49 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 592 | 404.22 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 658 | 404.69 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 685 | 404.98 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 729 | 405.38 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 783 | 405.83 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 820 | 406.09 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 830 | 406.11 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 14 |
| 872 | 406.48 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 873 | 406.48 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 887 | 406.56 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 935 | 407.14 | humidity | 80 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 966 | 407.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 971 | 407.44 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 19 |