Os04g0553800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 8 protein.
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Os04g0553800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 8 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.12 | 0.319 | 9.79 | 0.886 | 1.62 | 0.774 | -0.437 | 0.0159 | 0.576 | 15.8 | 22.63 | 10 | -- | -- |
| 46.12 | 0.316 | 9.79 | 0.886 | 1.62 | 0.773 | -0.446 | -- | 0.577 | 15.8 | 22.63 | 9 | -- | -- |
| 46.53 | 0.318 | 9.79 | 0.889 | 1.62 | 0.77 | -- | 0.193 | 0.572 | 15.8 | 22.62 | 9 | -- | -- |
| 46.72 | 0.318 | 9.79 | 0.879 | 1.63 | 0.785 | -- | -- | 0.574 | 15.7 | 22.63 | 9 | -- | -- |
| 152.25 | 0.575 | 9.79 | 0.818 | -- | 0.146 | -- | 0.371 | 0.532 | -- | 62.79 | 2 | -- | -- |
| 57.33 | 0.355 | 9.81 | 0.85 | 1.36 | -- | -0.461 | -- | 0.566 | 17.6 | -- | -- | -- | -- |
| 57.85 | 0.356 | 9.81 | 0.852 | 1.36 | -- | -- | -- | 0.564 | 17.6 | -- | -- | -- | -- |
| 152.48 | 0.578 | 9.79 | 0.811 | -- | 0.096 | -- | -- | 0.531 | -- | 22.63 | 9 | -- | -- |
| 67.05 | 0.381 | 9.81 | -- | 1.59 | 0.74 | -- | -- | 0.476 | 15.8 | 22.35 | 9 | -- | -- |
| 153.22 | 0.578 | 9.79 | 0.808 | -- | -- | -- | -- | 0.531 | -- | -- | -- | -- | -- |
| 76.98 | 0.41 | 9.83 | -- | 1.34 | -- | -- | -- | 0.469 | 17.7 | -- | -- | -- | -- |
| 169.77 | 0.609 | 9.81 | -- | -- | 0.142 | -- | -- | 0.44 | -- | 60.01 | 3 | -- | -- |
| 170.45 | 0.609 | 9.81 | -- | -- | -- | -- | -- | 0.441 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.40 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 2 | 42.77 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 18 |
| 3 | 42.79 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 19 |
| 7 | 43.05 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 18 |
| 25 | 43.87 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 28 | 43.98 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 7 | 12 |
| 30 | 43.99 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 10 |
| 34 | 44.03 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 14 | 5 |
| 35 | 44.05 | humidity | 70.0 | 10 | > th | dose independent | rect. | 1 | 18 |
| 42 | 44.20 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 1 | 18 |
| 43 | 44.25 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 12 | 7 |
| 47 | 44.34 | radiation | 20.0 | 10 | < th | dose independent | rect. | 1 | 18 |
| 53 | 44.40 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 1 | 18 |
| 58 | 44.46 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 89 | 44.70 | radiation | 20.0 | 10 | < th | dose dependent | sin | 0 | NA |
| 94 | 44.73 | radiation | 30.0 | 90 | < th | dose independent | rect. | 13 | 6 |
| 96 | 44.76 | radiation | 20.0 | 10 | < th | dose independent | rect. | 13 | 7 |
| 107 | 44.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 23 |
| 108 | 44.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 112 | 44.92 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 8 |
| 131 | 45.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 14 |
| 132 | 45.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 14 |
| 152 | 45.12 | radiation | 10.0 | 90 | > th | dose independent | rect. | 9 | 5 |
| 154 | 45.13 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 170 | 45.22 | temperature | 30.0 | 90 | < th | dose independent | rect. | 13 | 6 |
| 180 | 45.26 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 186 | 45.29 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 188 | 45.30 | temperature | 30.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 189 | 45.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 21 |
| 190 | 45.30 | temperature | 20.0 | 10 | > th | dose dependent | sin | 3 | NA |
| 192 | 45.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 21 |
| 195 | 45.35 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 196 | 45.35 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 15 |
| 199 | 45.37 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 20 | 20 |
| 229 | 45.45 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 19 | 19 |
| 244 | 45.49 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 257 | 45.55 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 13 | 6 |
| 273 | 45.61 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 14 | 5 |
| 287 | 45.68 | humidity | 80.0 | 30 | < th | dose independent | rect. | 9 | 5 |
| 290 | 45.70 | humidity | 60.0 | 90 | > th | dose independent | rect. | 13 | 6 |
| 303 | 45.75 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 15 |
| 310 | 45.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 330 | 45.84 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 4 |
| 353 | 45.90 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 382 | 45.99 | radiation | 10.0 | 10 | > th | dose independent | sin | 23 | NA |
| 387 | 46.00 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 10 |
| 399 | 46.05 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 4 |
| 401 | 46.05 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 19 |
| 403 | 46.05 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 19 |
| 416 | 46.09 | humidity | 80.0 | 10 | < th | dose independent | rect. | 8 | 8 |
| 445 | 46.15 | radiation | 20.0 | 10 | < th | dose independent | rect. | 22 | 22 |
| 492 | 46.23 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 22 | 10 |
| 494 | 46.24 | radiation | 40.0 | 270 | < th | dose independent | rect. | 22 | 10 |
| 495 | 46.24 | radiation | 40.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 497 | 46.25 | humidity | 70.0 | 10 | > th | dose independent | rect. | 13 | 6 |
| 498 | 46.25 | radiation | 20.0 | 10 | < th | dose independent | rect. | 10 | 10 |
| 511 | 46.27 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 8 | 8 |
| 524 | 46.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 10 |
| 525 | 46.29 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 10 |
| 526 | 46.29 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 10 |
| 528 | 46.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 10 |
| 529 | 46.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 14 |
| 530 | 46.29 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 537 | 46.31 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 10 |
| 541 | 46.31 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 10 | 15 |
| 571 | 46.35 | radiation | 20.0 | 30 | < th | dose independent | rect. | 12 | 22 |
| 576 | 46.36 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 14 |
| 604 | 46.41 | radiation | 10.0 | 90 | > th | dose independent | rect. | 17 | 21 |
| 625 | 46.47 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 1 |
| 626 | 46.47 | radiation | 10.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 646 | 46.51 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 19 |
| 773 | 46.64 | radiation | 20.0 | 30 | < th | dose independent | rect. | 7 | 12 |
| 806 | 46.68 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 19 |
| 863 | 46.74 | radiation | 10.0 | 30 | > th | dose independent | rect. | 17 | 23 |
| 877 | 46.76 | wind | 1.0 | 90 | > th | dose independent | rect. | 14 | 5 |
| 893 | 46.78 | radiation | 20.0 | 10 | < th | dose dependent | no | NA | NA |
| 899 | 46.79 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 19 |
| 913 | 46.81 | temperature | 10.0 | 90 | > th | dose independent | rect. | 14 | 5 |
| 915 | 46.81 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 14 | 5 |
| 920 | 46.81 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 19 |
| 938 | 46.83 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 23 | 15 |
| 979 | 46.88 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 988 | 46.90 | wind | 9.0 | 90 | < th | dose independent | rect. | 14 | 5 |