BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0623400 Os02g0623400|Os02g0623400
(232 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0623400 Protein of unknown function DUF640 domain cont... 285 2e-77
Os04g0516200 Protein of unknown function DUF640 domain cont... 223 7e-59
Os02g0811000 Protein of unknown function DUF640 domain cont... 211 3e-55
Os10g0478000 Protein of unknown function DUF640 domain cont... 207 4e-54
Os06g0672400 Protein of unknown function DUF640 domain cont... 204 5e-53
Os01g0828900 204 6e-53
Os02g0166800 Protein of unknown function DUF640 domain cont... 202 2e-52
Os05g0472000 196 1e-50
Os05g0347400 Protein of unknown function DUF640 domain cont... 195 2e-50
Os07g0139300 139 1e-33
>Os02g0623400 Protein of unknown function DUF640 domain containing protein
Length = 232
Score = 285 bits (730), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 151/212 (71%)
Query: 21 GLLMELSPPNHESSPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPQTPSRYEAQKRR 80
GLLMELSPPNHESSPPT TPQTPSRYEAQKRR
Sbjct: 21 GLLMELSPPNHESSPPTAGGGGGGGGDGAGGSSSAGASSSAGGGAATPQTPSRYEAQKRR 80
Query: 81 DWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAAXXXXXXXXXXXXXXX 140
DWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAA
Sbjct: 81 DWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAACPFFGHPNPPAPCPC 140
Query: 141 XLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVREHQARARGVSYEKKK 200
LRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVREHQARARGVSYEKKK
Sbjct: 141 PLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVREHQARARGVSYEKKK 200
Query: 201 RKKPQPADTSXXXXXXXXXXXXXXXXSAGAAC 232
RKKPQPADTS SAGAAC
Sbjct: 201 RKKPQPADTSGGGGHPHPPPPPPPPPSAGAAC 232
>Os04g0516200 Protein of unknown function DUF640 domain containing protein
Length = 202
Score = 223 bits (569), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/131 (84%), Positives = 112/131 (85%)
Query: 67 TPQTPSRYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAAX 126
PQ+PSRYEAQKRRDWNTFGQYLRNHRPPL LAQCSGAHVLEFLRYLDQFGKTKVHTAA
Sbjct: 35 APQSPSRYEAQKRRDWNTFGQYLRNHRPPLSLAQCSGAHVLEFLRYLDQFGKTKVHTAAC 94
Query: 127 XXXXXXXXXXXXXXXLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVRE 186
LRQAWGSLDALVGRLRAAFEENGGRPESNPFA RAVRLYLREVRE
Sbjct: 95 PFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNPFAARAVRLYLREVRE 154
Query: 187 HQARARGVSYE 197
HQARARGVSYE
Sbjct: 155 HQARARGVSYE 165
>Os02g0811000 Protein of unknown function DUF640 domain containing protein
Length = 248
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/136 (75%), Positives = 110/136 (80%)
Query: 72 SRYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAAXXXXXX 131
SRYE+QKRRDWNTFGQYLRNHRPPL L++CSGAHVLEFL+Y+DQFGKTKVHT
Sbjct: 79 SRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGH 138
Query: 132 XXXXXXXXXXLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVREHQARA 191
LRQAWGSLDAL+GRLRAA+EENGG PE NPF RAVRLYLREVRE QARA
Sbjct: 139 PNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARA 198
Query: 192 RGVSYEKKKRKKPQPA 207
RG+SYEKKKRKKP A
Sbjct: 199 RGISYEKKKRKKPSSA 214
>Os10g0478000 Protein of unknown function DUF640 domain containing protein
Length = 204
Score = 207 bits (528), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/127 (80%), Positives = 106/127 (83%)
Query: 71 PSRYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAAXXXXX 130
PSRYE+QKRRDWNTFGQYLRNHRPPL LA+CSGAHVLEFLRYLDQFGKTKVH A
Sbjct: 38 PSRYESQKRRDWNTFGQYLRNHRPPLSLARCSGAHVLEFLRYLDQFGKTKVHAPACPFFG 97
Query: 131 XXXXXXXXXXXLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVREHQAR 190
LRQAWGSLDALVGRLRAA+EENGGRPE+NPF RAVRLYLREVREHQAR
Sbjct: 98 HPAPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPENNPFGARAVRLYLREVREHQAR 157
Query: 191 ARGVSYE 197
ARGVSYE
Sbjct: 158 ARGVSYE 164
>Os06g0672400 Protein of unknown function DUF640 domain containing protein
Length = 277
Score = 204 bits (518), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 99/133 (74%), Positives = 111/133 (83%)
Query: 71 PSRYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAAXXXXX 130
PSRYE+QKRRDW+TFGQYLRNHRPPL L++CSGAHVLEFLRYLDQFGKTKVH A
Sbjct: 20 PSRYESQKRRDWHTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAAGCPFFG 79
Query: 131 XXXXXXXXXXXLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVREHQAR 190
LRQAWGSLDALVGRLRAAFEE+GGRPE+NPF RAVRLYLREVR+ QA+
Sbjct: 80 HPSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPEANPFGARAVRLYLREVRDSQAK 139
Query: 191 ARGVSYEKKKRKK 203
ARG++YEKK+RK+
Sbjct: 140 ARGIAYEKKRRKR 152
>Os01g0828900
Length = 212
Score = 204 bits (518), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 98/136 (72%), Positives = 110/136 (80%)
Query: 72 SRYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAAXXXXXX 131
SRYE+QKRRDWNTF QYLRNHRPPL LA+CSGAHV+EFLRYLDQFGKTKVH +
Sbjct: 30 SRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVIEFLRYLDQFGKTKVHASGCAFYGQ 89
Query: 132 XXXXXXXXXXLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVREHQARA 191
LRQAWGSLDAL+GRLRAA+EE+GG PESNPFA RAVR+YLREVR+ QA+A
Sbjct: 90 PSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGGTPESNPFAARAVRIYLREVRDSQAKA 149
Query: 192 RGVSYEKKKRKKPQPA 207
RG+ YEKKKRK+ Q A
Sbjct: 150 RGIPYEKKKRKRSQAA 165
>Os02g0166800 Protein of unknown function DUF640 domain containing protein
Length = 191
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/139 (69%), Positives = 111/139 (79%)
Query: 71 PSRYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAAXXXXX 130
PSRYE+QKRRDW TFGQYLRNHRPPL L++CSGAHVLEFLRYLDQFGKTKVH
Sbjct: 21 PSRYESQKRRDWQTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAHGCPFFG 80
Query: 131 XXXXXXXXXXXLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVREHQAR 190
LRQAWGSLDALVGRLRAAFEE+GGRPESNPF RAVRLYLR++R+ Q++
Sbjct: 81 HPSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPESNPFGARAVRLYLRDIRDTQSK 140
Query: 191 ARGVSYEKKKRKKPQPADT 209
ARG++YEKK+RK+ + T
Sbjct: 141 ARGIAYEKKRRKRAAASHT 159
>Os05g0472000
Length = 238
Score = 196 bits (498), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/135 (69%), Positives = 108/135 (80%)
Query: 69 QTPSRYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAAXXX 128
Q SRYE+QKRRDWNTF QYL+NHRPPL LA+CSGAHV+EFL+YLDQFGKTKVH +
Sbjct: 26 QQLSRYESQKRRDWNTFLQYLKNHRPPLTLARCSGAHVIEFLKYLDQFGKTKVHASGCAY 85
Query: 129 XXXXXXXXXXXXXLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVREHQ 188
LRQAWGSLDAL+GRLRAA+EE+G PESNPFA RAVR+YLREVR+ Q
Sbjct: 86 YGQPSPPAPCPCPLRQAWGSLDALIGRLRAAYEESGHAPESNPFAARAVRIYLREVRDAQ 145
Query: 189 ARARGVSYEKKKRKK 203
A+ARG+ YEKKKRK+
Sbjct: 146 AKARGIPYEKKKRKR 160
>Os05g0347400 Protein of unknown function DUF640 domain containing protein
Length = 284
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 106/131 (80%)
Query: 72 SRYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAAXXXXXX 131
SRYE+QKRRDWNTF QYLRNH+PPL L +CSGAHV+EFL+YLDQFGKTKVH
Sbjct: 66 SRYESQKRRDWNTFLQYLRNHKPPLTLPRCSGAHVIEFLKYLDQFGKTKVHADGCAYFGE 125
Query: 132 XXXXXXXXXXLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVREHQARA 191
LRQAWGSLDAL+GRLRAA+EE+GGRPESNPFA RAVR+YLREVRE QA+A
Sbjct: 126 PNPPAPCACPLRQAWGSLDALIGRLRAAYEESGGRPESNPFAARAVRIYLREVREAQAKA 185
Query: 192 RGVSYEKKKRK 202
RG+ YEKK+++
Sbjct: 186 RGIPYEKKRKR 196
>Os07g0139300
Length = 293
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 101/165 (61%), Gaps = 32/165 (19%)
Query: 71 PSRYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHT------- 123
PSRYE+QKRRDW TF QYL HRPPL L +CSGAHVLEFLRYLD+FGKT+VH
Sbjct: 39 PSRYESQKRRDWQTFTQYLAAHRPPLELRRCSGAHVLEFLRYLDRFGKTRVHEPPCPSYG 98
Query: 124 --AAXXXXXXXXXXXXXXXXLRQAWGSLDALVGRLRAAFEENGGRP-------------- 167
+ LRQAWGSLDALVGRLRAA++E GR
Sbjct: 99 GRSPSAAGPVAAAAAACQCPLRQAWGSLDALVGRLRAAYDERHGRAGEPDAVAGAGAVAT 158
Query: 168 ---------ESNPFAVRAVRLYLREVREHQARARGVSYEKKKRKK 203
+NPFA RAVRLYLR+VR+ QA ARG+SY KKK+++
Sbjct: 159 DSTSSSSAAAANPFAARAVRLYLRDVRDAQAMARGISYHKKKKRR 203
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.132 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,316,154
Number of extensions: 201161
Number of successful extensions: 409
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 397
Number of HSP's successfully gapped: 10
Length of query: 232
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 134
Effective length of database: 11,918,829
Effective search space: 1597123086
Effective search space used: 1597123086
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 154 (63.9 bits)