BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0553000 Os02g0553000|J065095N18
(125 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0553000 Protein kinase domain containing protein 262 5e-71
Os01g0296000 Protein kinase-like domain containing protein 137 3e-33
Os01g0515300 Protein kinase-like domain containing protein 97 2e-21
Os10g0468500 Tyrosine protein kinase domain containing protein 82 8e-17
Os10g0119200 Protein kinase-like domain containing protein 80 4e-16
Os10g0119500 79 1e-15
Os07g0152200 Protein kinase domain containing protein 72 1e-13
Os11g0232100 Protein kinase-like domain containing protein 71 2e-13
>Os02g0553000 Protein kinase domain containing protein
Length = 125
Score = 262 bits (669), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 NKVLNFYMAELAYTTRVTEKCDVYSFGVLVFELFMGHHPGDFLLSFSMAKESTTLKDLLD 60
NKVLNFYMAELAYTTRVTEKCDVYSFGVLVFELFMGHHPGDFLLSFSMAKESTTLKDLLD
Sbjct: 1 NKVLNFYMAELAYTTRVTEKCDVYSFGVLVFELFMGHHPGDFLLSFSMAKESTTLKDLLD 60
Query: 61 ARIPLPKAETASEIFRVIMAAVQCLDPNPSRRPTMQHVTRMFSTAEGPSNPDHLHVDIII 120
ARIPLPKAETASEIFRVIMAAVQCLDPNPSRRPTMQHVTRMFSTAEGPSNPDHLHVDIII
Sbjct: 61 ARIPLPKAETASEIFRVIMAAVQCLDPNPSRRPTMQHVTRMFSTAEGPSNPDHLHVDIII 120
Query: 121 PAYYQ 125
PAYYQ
Sbjct: 121 PAYYQ 125
>Os01g0296000 Protein kinase-like domain containing protein
Length = 311
Score = 137 bits (344), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
Query: 7 YMA-ELAYTTRVTEKCDVYSFGVLVFELFMGHHPGDFLLSFSM-AKESTTLKDLLDARIP 64
Y+A ELAYTT+VTEKCDVYSFGV+V EL MG HPGDF+ S S +K+ST +KDLLD R+P
Sbjct: 192 YLAPELAYTTKVTEKCDVYSFGVVVLELLMGSHPGDFVSSISCPSKKSTPMKDLLDTRLP 251
Query: 65 LPKAETASEIFRVIMAAVQCLDPNPSRRPTMQHVTRMFSTAEGPSNPDHLHVDII 119
P E ASEIF +I A+QCL PNPS RPTM +FS + D+LH DI+
Sbjct: 252 PPAGEVASEIFGLITVAIQCLHPNPSTRPTMPSAIHLFSKFSRAVDLDYLHADIM 306
>Os01g0515300 Protein kinase-like domain containing protein
Length = 559
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 7 YMA-ELAYTTRVTEKCDVYSFGVLVFELFMGHHPGDFLLSFSMAKESTTLKDLLDARIPL 65
Y+A EL+YT+ VTEKCDVYSFGV+V E+ MG HPGD S + +K L ++LD R+P+
Sbjct: 461 YIAPELSYTSLVTEKCDVYSFGVVVLEVLMGKHPGDIQSSITTSKYDDFLDEILDKRLPV 520
Query: 66 PKAETASEIFRVIMAAVQCLDPNPSRRPTMQHV 98
P + A ++ R + A CL P+P RPTM V
Sbjct: 521 PADDEADDVNRCLSVAFDCLLPSPQERPTMCQV 553
>Os10g0468500 Tyrosine protein kinase domain containing protein
Length = 1213
Score = 82.0 bits (201), Expect = 8e-17, Method: Composition-based stats.
Identities = 48/102 (47%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 7 YMA-ELAYTTRVTEKCDVYSFGVLVFELFMGHHPGDFLLSF----SMAKESTTLKDLLDA 61
YMA E AYT RVTEKCDVYSFGV+ E+ MG HPGD L S S ++ LKD+LD
Sbjct: 1088 YMAPEFAYTMRVTEKCDVYSFGVVALEVMMGKHPGDLLTSLPAISSSEEDDLLLKDILDQ 1147
Query: 62 RIPLPKAETASEIFRVIMAAVQCLDPNPSRRPTMQHVTRMFS 103
R+ P + A E+ ++ A+ C NP RP+M+ V + S
Sbjct: 1148 RLDAPTGQLAEEVVFIVRIALGCTRVNPESRPSMRSVAQEIS 1189
>Os10g0119200 Protein kinase-like domain containing protein
Length = 1092
Score = 79.7 bits (195), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 7 YMA-ELAYTTRVTEKCDVYSFGVLVFELFMGHHPGDFLLSFSMAKE-STTLKDLLDARIP 64
Y+A EL+YT+ VTEKCDVYSFG+++ E+ +G HP D L + +++ + T+K++LD+R
Sbjct: 977 YIAPELSYTSLVTEKCDVYSFGMVMLEVVIGKHPRDLLQHLTSSRDHNITIKEILDSRPL 1036
Query: 65 LPKAETASEIFRVIMAAVQCLDPNPSRRPTMQ 96
P I +I CL +P RPTMQ
Sbjct: 1037 APTTTEEENIVSLIKVVFSCLKASPQARPTMQ 1068
>Os10g0119500
Length = 540
Score = 78.6 bits (192), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Query: 7 YMA-ELAYTTRVTEKCDVYSFGVLVFELFMGHHPGDFLLS-FSMAKESTTLKDLLDARIP 64
Y+A EL++T VTEKCDVYSFGV+V E+ MG HP + L + S ++ T +K++LD R
Sbjct: 422 YIAPELSFTCVVTEKCDVYSFGVVVLEVVMGKHPMELLQTLLSSEQQHTLVKEILDERPT 481
Query: 65 LPKAETASEIFRVIMAAVQCLDPNPSRRPTM----QHVTRMFSTAEGP 108
P I +I A+ CL+ +P RPTM Q + + S++ P
Sbjct: 482 APTTAEEESIEILIKVAISCLEASPHARPTMMEAYQTLIQQHSSSSCP 529
>Os07g0152200 Protein kinase domain containing protein
Length = 137
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 9 AELAYTTRVTEKCDVYSFGVLVFELFMGHHP-------GDFL-LSFSMAKESTTLKDLLD 60
AE A+T +VTEKCD+YSFGV++ EL G P GD + L M STT ++ D
Sbjct: 8 AEYAFTMKVTEKCDIYSFGVVLLELVTGQSPIQPLEQGGDLVNLVRRMTNSSTTNSEIFD 67
Query: 61 ARIPLPKAETASEIFRVIMAAVQCLDPNPSRRPTMQHVTRMFSTAEG 107
+R+ L EI V+ A+ C +P RP+M+ V M A
Sbjct: 68 SRLNLNSRRVLEEISLVLKIALFCTSESPLDRPSMREVISMLMDARA 114
>Os11g0232100 Protein kinase-like domain containing protein
Length = 987
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 23/126 (18%)
Query: 7 YMA-ELAYTTRVTEKCDVYSFGVLVFELFMGHHPGD----------FLLSFSMAKESTTL 55
Y+A ELAY+ +VTEK DVYSFGV++ EL G P D F LS +A ES +
Sbjct: 847 YLAPELAYSMKVTEKTDVYSFGVVLLELVTGRSPIDPAFGEGKDIVFWLSTKLAAES--I 904
Query: 56 KDLLDARIPLPKAETA---------SEIFRVIMAAVQCLDPNPSRRPTMQHVTRMFSTA- 105
D+LD R+ P ++ ++ +V+ AV C P+ RPTM+ V +M + A
Sbjct: 905 DDVLDPRVAAPSPSSSSAAAAARDREDMIKVLKVAVLCTAKLPAGRPTMRDVVKMLTDAG 964
Query: 106 EGPSNP 111
GP +P
Sbjct: 965 AGPCSP 970
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,134,735
Number of extensions: 154667
Number of successful extensions: 2210
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 2307
Number of HSP's successfully gapped: 8
Length of query: 125
Length of database: 17,035,801
Length adjustment: 88
Effective length of query: 37
Effective length of database: 12,440,969
Effective search space: 460315853
Effective search space used: 460315853
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 149 (62.0 bits)