BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0539900 Os02g0539900|Os02g0539900
(672 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0539900 WD40-like domain containing protein 1214 0.0
Os04g0417800 WD40-like domain containing protein 499 e-141
Os04g0568400 Quinoprotein amine dehydrogenase, beta chain-l... 277 2e-74
Os03g0115400 WD40-like domain containing protein 274 1e-73
Os04g0678300 WD40-like domain containing protein 243 4e-64
Os11g0187000 WD40-like domain containing protein 230 2e-60
Os12g0178633 Quinonprotein alcohol dehydrogenase-like domai... 211 2e-54
Os02g0638900 WD40-like domain containing protein 194 2e-49
Os04g0529400 WD40-like domain containing protein 123 4e-28
>Os02g0539900 WD40-like domain containing protein
Length = 672
Score = 1214 bits (3141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/644 (91%), Positives = 590/644 (91%)
Query: 29 KNRSSTEISTSEAGYELWAGEPMSVRERRHRFLKGMGFLEPGPTGTAFPQWLAEIATTDC 88
KNRSSTEISTSEAGYELWAGEPMSVRERRHRFLKGMGFLEPGPTGTAFPQWLAEIATTDC
Sbjct: 29 KNRSSTEISTSEAGYELWAGEPMSVRERRHRFLKGMGFLEPGPTGTAFPQWLAEIATTDC 88
Query: 89 CSFHDFXXXXXXXXXXXXXXXXDSILAATDNTNDSADNCTRDVDYNSSGRRSTTSHDQGQ 148
CSFHDF DSILAATDNTNDSADNCTRDVDYNSSGRRSTTSHDQGQ
Sbjct: 89 CSFHDFEERISSICSSFRSCFSDSILAATDNTNDSADNCTRDVDYNSSGRRSTTSHDQGQ 148
Query: 149 HDVLSEIVEEAGTSSDEMVTPNAPEIVPGFSKLMRKLLRIRFGHGPKRNEFKSLWEIFMR 208
HDVLSEIVEEAGTSSDEMVTPNAPEIVPGFSKLMRKLLRIRFGHGPKRNEFKSLWEIFMR
Sbjct: 149 HDVLSEIVEEAGTSSDEMVTPNAPEIVPGFSKLMRKLLRIRFGHGPKRNEFKSLWEIFMR 208
Query: 209 KKVSDRVLSMDDVHVQPRGLNSGTLYRTKVHQQNKKWMDFTAVYMCQEIQAHEGLIRVMK 268
KKVSDRVLSMDDVHVQPRGLNSGTLYRTKVHQQNKKWMDFTAVYMCQEIQAHEGLIRVMK
Sbjct: 209 KKVSDRVLSMDDVHVQPRGLNSGTLYRTKVHQQNKKWMDFTAVYMCQEIQAHEGLIRVMK 268
Query: 269 FSSSGWHLASGGEDCVVRVWQITEVESSPDLYGRDVPEDMNKKKDVKIKPLAIIPKKVFS 328
FSSSGWHLASGGEDCVVRVWQITEVESSPDLYGRDVPEDMNKKKDVKIKPLAIIPKKVFS
Sbjct: 269 FSSSGWHLASGGEDCVVRVWQITEVESSPDLYGRDVPEDMNKKKDVKIKPLAIIPKKVFS 328
Query: 329 ITETPLHEFQGHTSDVLDLAWXXXXXXXXXXXXXXIRMWKVGCYDCLAVFRHGDYVTCVQ 388
ITETPLHEFQGHTSDVLDLAW IRMWKVGCYDCLAVFRHGDYVTCVQ
Sbjct: 329 ITETPLHEFQGHTSDVLDLAWSKSDFLLSSSKDTTIRMWKVGCYDCLAVFRHGDYVTCVQ 388
Query: 389 FNPVDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYIITAISHRPDGKGFVVGSVKGRCR 448
FNPVDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYIITAISHRPDGKGFVVGSVKGRCR
Sbjct: 389 FNPVDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYIITAISHRPDGKGFVVGSVKGRCR 448
Query: 449 FYDQSGLFPLGRNIERNKLMRIKRRRCAANKITNIQFSQGHPSRMIITSKDHKIRVSEGH 508
FYDQSGLFPLGRNIERNKLMRIKRRRCAANKITNIQFSQGHPSRMIITSKDHKIRVSEGH
Sbjct: 449 FYDQSGLFPLGRNIERNKLMRIKRRRCAANKITNIQFSQGHPSRMIITSKDHKIRVSEGH 508
Query: 509 KITQKFQGQWRSKVLVPPSLTPDGRYLISAGRDSKIRIWNFDXXXXXXXXXXXXELFFSE 568
KITQKFQGQWRSKVLVPPSLTPDGRYLISAGRDSKIRIWNFD ELFFSE
Sbjct: 509 KITQKFQGQWRSKVLVPPSLTPDGRYLISAGRDSKIRIWNFDGGGRRRRVVSSRELFFSE 568
Query: 569 GVTAVAPWARAMXXXXXXADAPTLCYDRERCSFGTWFVVPDGXXXXXXTTWPEERLLPSL 628
GVTAVAPWARAM ADAPTLCYDRERCSFGTWFVVPDG TTWPEERLLPSL
Sbjct: 569 GVTAVAPWARAMGGGGGGADAPTLCYDRERCSFGTWFVVPDGAAAAAATTWPEERLLPSL 628
Query: 629 RYVNCAGMDDCRSQVPAAWNMVVVTGSRGGAIRAFHNYGLPVRL 672
RYVNCAGMDDCRSQVPAAWNMVVVTGSRGGAIRAFHNYGLPVRL
Sbjct: 629 RYVNCAGMDDCRSQVPAAWNMVVVTGSRGGAIRAFHNYGLPVRL 672
>Os04g0417800 WD40-like domain containing protein
Length = 680
Score = 499 bits (1286), Expect = e-141, Method: Compositional matrix adjust.
Identities = 297/678 (43%), Positives = 387/678 (57%), Gaps = 63/678 (9%)
Query: 33 STEISTSEAG-------YELWAGEPMSVRERRHRFLKGMGFLEPGPTGTAFPQWLAEIAT 85
S + STS+ G Y++W EPMSV ERR RFLKGMGF E T F Q EI T
Sbjct: 28 SDDCSTSDEGLASRRFEYDIWGNEPMSVEERRQRFLKGMGFDEFLATRVDFSQPQGEITT 87
Query: 86 TDCCSFHDFXXXXXXXXXXXXXXXXDSILAATDNTNDSADNCTRDVDYNSSGRRSTTSHD 145
F +S + ++ +D A C D+D SG R T +D
Sbjct: 88 VG-----PFADLGLEESTTSDISSVNSSVPENESVSD-ASCCIGDID---SGERYTVQND 138
Query: 146 QGQHDVLSEIVEEAGTSSDEMVTPNAPEIVPGFSKLMRKLLRIRFGHG--PKRNEF---- 199
G ++ S + + A S ++V+ + VPG S+ ++KLLR + K+N F
Sbjct: 139 -GYGELTSMLKDVA---SHKVVSLLEFDGVPGLSQSVQKLLRKVYSSSMEEKKNVFNKKK 194
Query: 200 --KSLWEIFMRKKVSDRVLSMDDVHVQPRGLNSGTLYRTKVHQQNKKWMDFTAVYMCQEI 257
KSLW+ FM+ + + D V + G RTKV + KK M+F+AV++ QEI
Sbjct: 195 GVKSLWKSFMKNRSFGGICKHD---VNVKNCTIGIPSRTKVQHRKKKTMEFSAVHLGQEI 251
Query: 258 QAHEGLIRVMKFSSSGWHLASGGEDCVVRVWQITEVESSPDLYGRDVPEDMNKKKDV--- 314
QAH+GLI+VMKFS SGW+LA+GGEDC+VR+WQI EVE+S L+G D P++ + K +
Sbjct: 252 QAHKGLIKVMKFSPSGWYLATGGEDCIVRIWQIMEVEASSKLHGGDNPQNYDDKITIIKT 311
Query: 315 -----KIKPLAIIPKKVFSITETPLHEFQGHTSDVLDLAWXXXXXXXXXXXXXXIRMWKV 369
K LA++PKK F I+ETPLHEFQGHT D+LD+AW +R+WKV
Sbjct: 312 ELGRGKNHALAVVPKKGFRISETPLHEFQGHTDDILDMAWSESDYLLTSSKDKMVRLWKV 371
Query: 370 GCYDCLAVFRHGDYVTCVQFNPVDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYIITAI 429
GC CL +F+H DYVTCVQFNP+DERYFISGSIDGKVRVWD DKRVVDW DT+ IITA+
Sbjct: 372 GCDGCLGLFKHKDYVTCVQFNPIDERYFISGSIDGKVRVWDALDKRVVDWTDTRKIITAL 431
Query: 430 SHRPDGKGFVVGSVKGRCRFYDQSGLFPLGRNIERNKLMRIKRRRCAANKITNIQFSQGH 489
S++PDGKGF+VG+ G CRFYDQS G NI+ +K + ++ ++ A +++ ++Q
Sbjct: 432 SYQPDGKGFIVGTTSGECRFYDQS-----GENIQLDKELFMQGKKSAVHRVNSLQSRSSD 486
Query: 490 PSRMIITSKDHKIRVSEGHKITQKFQGQWRSKVLVPPSLTPDGRYLISAGRDSKIRIWNF 549
SR+ ITS KIRV++G I QKF+G W K L PSLT DGRYLISAG DS + IWNF
Sbjct: 487 SSRITITSTGSKIRVADGVDIIQKFEGPWNLKALSSPSLTSDGRYLISAGLDSNVYIWNF 546
Query: 550 DXXXXX-----XXXXXXXELFFSEGVTAVAPW----------ARAMXXXXXXADAPTLCY 594
D E FFS+ VT PW + +P L
Sbjct: 547 DIPSVADHKGEAKSVRSCEKFFSKDVTTAVPWPGLHQERQQVKNSSSLTEESVSSPILHR 606
Query: 595 DRERCSFGTWFVVPDGXXXXXXTTWPEERLLPSLRYVNCAGMDDCRSQVPAAWNMVVVTG 654
ER S DG TWPEE+L P+ + + + DC S + AWN V+VT
Sbjct: 607 HGERRSPAA-RCFADG--MKGTPTWPEEKLPPA-KAADAPRLSDCLSTISPAWNTVIVTA 662
Query: 655 SRGGAIRAFHNYGLPVRL 672
SR G IR+FHNYGLPVRL
Sbjct: 663 SRDGVIRSFHNYGLPVRL 680
>Os04g0568400 Quinoprotein amine dehydrogenase, beta chain-like domain containing
protein
Length = 698
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 240/504 (47%), Gaps = 66/504 (13%)
Query: 228 LNSGTLYRTKVHQQNKKWMDFTAVYMCQEIQAHEGLIRVMKFSSSGWHLASGGEDCVVRV 287
+ +G R KVH K+ + +AVY Q I+AH+G I MKFS G LA+GGED VVRV
Sbjct: 198 IGAGRYERIKVHSYRKRSKELSAVYQGQVIKAHDGAILTMKFSPDGQLLATGGEDGVVRV 257
Query: 288 WQITEVE---------SSPDLYGRD----VPEDMNKKKDVKIKPLA-------IIPKKVF 327
W + + E S L R P + +K KI L ++P VF
Sbjct: 258 WAVMQSEDCKIPLDDPSCVYLKARRKYGLAPVNAESEKKSKINGLKKSDSACIVVPTMVF 317
Query: 328 SITETPLHEFQGHTSDVLDLAWXXXXXXXXXXXXXXIRMWKVGCYDCLAVFRHGDYVTCV 387
I+E P+HEF+GH+ DVLDL+W +RMW++G +C+ V+ H ++VTCV
Sbjct: 318 QISEEPVHEFRGHSGDVLDLSWSSDKHLLSASTDKTVRMWEIGYANCIRVYPHSNFVTCV 377
Query: 388 QFNPVDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYIITAISHRPDGKGFVVGSVKGRC 447
QFN DE FISGSIDGK+RVWD++ VVDW D + I+TA+ +RP GKG VVG++ G C
Sbjct: 378 QFNLADENLFISGSIDGKIRVWDITRSSVVDWVDIRDIVTAVCYRPGGKGVVVGTITGNC 437
Query: 448 RFYDQS-GLFPLGRNIERNKLMRIKRRRCAANKITNIQFSQGHPSRMIITSKDHKIRVSE 506
RFY+ S L L I N +++ + +IT QF +PS++++TS D KIR+ +
Sbjct: 438 RFYEISDNLLKLETQIALN-----GKKKSSLKRITGFQFCPSNPSKLMVTSADSKIRILD 492
Query: 507 GHKITQKFQGQWRSKVLVPPSLTPDGRYLISAGRDSKIRIWN----FDXXXXXXXXXXXX 562
G + Q + G + + TP+G+++ISA DS + +W+ ++
Sbjct: 493 GTNVIQNYSGLRSGSCQLSATFTPEGQHIISASEDSNVYVWSHENQYECACKQAKTTQTS 552
Query: 563 ELFFSEGVTAVAPW----ARAMXXXXXXADAP----------TLCYDRERC----SFGTW 604
E F S PW R+ P + Y+ C S
Sbjct: 553 EHFRSNNAAIAIPWNGTKPRSPVPLSSQILPPQGDTFWSMSKAIKYNSSLCGKDSSIKKI 612
Query: 605 FVVPDG-------------XXXXXXTTWPEERLLPSLRYVNCAG-----MDDCRSQVPAA 646
P TWPEE L + VN + +C +
Sbjct: 613 VSTPAAPGIFNLNQEFFIESSCKSSATWPEEMLPSTTASVNLDESQFKLLRNCFQGTSNS 672
Query: 647 WNMVVVTGSRGGAIRAFHNYGLPV 670
W V+VT G IR F N+GLPV
Sbjct: 673 WGQVIVTAGWDGRIRYFQNFGLPV 696
>Os03g0115400 WD40-like domain containing protein
Length = 746
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/509 (33%), Positives = 242/509 (47%), Gaps = 73/509 (14%)
Query: 231 GTLYRTKVHQQNKKWMDFTAVYMCQEIQAHEGLIRVMKFSSSGWHLASGGEDCVVRVWQI 290
G + R KV K+ + +AVY Q+I+AHEG I MKFSS G +LA+GGED VVRVW++
Sbjct: 244 GKVDRVKVRHYKKRSKELSAVYRGQDIKAHEGAIVTMKFSSDGQYLATGGEDGVVRVWRV 303
Query: 291 TEVESSPDL-YGRDVPE------------------DMNKKKDVKIKPLA------IIPKK 325
E E +L + D P + +K K K ++ +IP +
Sbjct: 304 VEGERPNELDFAEDDPSCVFFTVNENSELAPVNSSEGSKSKHYKNSKVSTDPACVVIPHR 363
Query: 326 VFSITETPLHEFQGHTSDVLDLAWXXXXXXXXXXXXXXIRMWKVGCYDCLAVFRHGDYVT 385
F++++ P+HEF GH +LDL+W +R+W+VGC CL VF H +YVT
Sbjct: 364 TFALSQEPVHEFYGHDDAILDLSWSKNRDLLSSSMDKTVRLWQVGCNSCLKVFSHTNYVT 423
Query: 386 CVQFNPVDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYIITAISHRPDGKGFVVGSVKG 445
CVQF+P + YFISG IDG VR+WDV +VVDW DTK IITA+ +RPDGK VVG++ G
Sbjct: 424 CVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADTKEIITAVCYRPDGKAAVVGTITG 483
Query: 446 RCRFYDQS-GLFPLGRNIERNKLMRIKRRRCAANKITNIQFSQGHPSRMIITSKDHKIRV 504
CR YD S L + N R++ +I Q+ P ++++TS D ++R+
Sbjct: 484 NCRHYDASENHLELESQVALN-----GRKKSPLKRIIGFQYCPSDPKKLMVTSGDSQVRI 538
Query: 505 SEGHKITQKFQGQWRSKVLVPPSLTPDGRYLISAGRDSKIRIWNFDXXXXXXXXXX---- 560
+G + ++G RS V S TPDG ++ISA DS I +WN+
Sbjct: 539 LDGLHVISNYKG-LRSSSQVAASFTPDGDHIISASDDSSIYMWNYANQIAPVTNHVKTVW 597
Query: 561 XXELFFSEGVTAVAPW-------------------ARAMXXXXXXADAPTLCYDRERCSF 601
E F V PW + D+ + + +
Sbjct: 598 SNEHFSCHDVAIAIPWNASQTRNSISLACSITSSQQEVLDEFHNEHDSSSCSHTEDSPDG 657
Query: 602 GTWFVVPDGXXXXX-----------XTTWPEERL------LPSLRYVNCAGMD-DCRSQV 643
+ + +P G TWPEE+L +LR + C++
Sbjct: 658 DSLYQLPSGNFTLSSAFFAESAPRGSATWPEEQLPSNSTTQSTLRKSQYKFLKASCQNAA 717
Query: 644 PAAWNMVVVTGSRGGAIRAFHNYGLPVRL 672
AW V+V G IR+F NYGLPV++
Sbjct: 718 THAWGQVIVAAGWDGYIRSFQNYGLPVQV 746
>Os04g0678300 WD40-like domain containing protein
Length = 819
Score = 243 bits (620), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 157/529 (29%), Positives = 230/529 (43%), Gaps = 92/529 (17%)
Query: 227 GLNSGTLYRTKVHQQNKKWMDFTAVYMCQEIQAHEGLIRVMKFSSSGWHLASGGEDCVVR 286
G S R +V Q K + T ++M QE+ AH G I + FS G +LAS GED V+
Sbjct: 300 GNGSRNAGRVRVRQYGKACKELTGLFMTQELAAHSGSIWCINFSLDGRYLASAGEDRVIH 359
Query: 287 VWQITEVESSPDLYGRDV-----------------------------------------P 305
VW+++E E +L G P
Sbjct: 360 VWEVSEGERKGELLGEGTVARENGGGCSPFLAAVGNGSPELATLSLSCADGGFVEKKRRP 419
Query: 306 EDMNKKKDVKIKPLAIIPKKVFSITETPLHEFQGHTSDVLDLAWXXXXXXXXXXXXXXIR 365
+ +K V L ++P+ VF + P+ GH +DVLDL+W ++
Sbjct: 420 RMQSSRKSVGSDHL-VVPECVFGFRDKPVCSLLGHAADVLDLSWSKSQYLLSSSMDKTVK 478
Query: 366 MWKVGCYDCLAVFRHGDYVTCVQFNPVDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYI 425
+W + CL F H DYVTC+QFNPVD+ +FISGS+D KVR+W+V D+++ DW+D +
Sbjct: 479 LWDITTSTCLKTFSHTDYVTCIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLHEM 538
Query: 426 ITAISHRPDGKGFVVGSVKGRCRFYDQS-GLFPLGRNIERNKLMRIKRRRCAANKITNIQ 484
+TA + PDG+ +VGS KG C +D + IE +RI++++ KIT Q
Sbjct: 539 VTAACYSPDGQVALVGSHKGSCHLFDTTEKKLQYKSQIE----LRIRKKKSGQKKITGFQ 594
Query: 485 FSQGHPSRMIITSKDHKIRVSEGHKITQKFQGQWRSKVLVPPSLTPDGRYLISAGRDSKI 544
F+ G S ++ITS D +IRV G ++ KF+G + + S+ P+G+Y++ A DS +
Sbjct: 595 FAPGSSSEVLITSADSRIRVVNGDELVHKFKGFRNTSSQISASVAPNGKYVVCASEDSHV 654
Query: 545 RIWNFDXXX------XXXXXXXXXELFFSEGVTAVAPWARA-----------------MX 581
+W D E F VT W A
Sbjct: 655 YVWRHDNTSHPSRSRSAVDVTNSYEHFHCHDVTVAITWPGAESRGSFGSRSSRNSDSDDA 714
Query: 582 XXXXXADAP------------TLCYDRERCSFGTWFVVP--DGXXXXXXTTWPEERLLPS 627
DAP C R C P DG T+WP+E+ +
Sbjct: 715 VMNTGRDAPVENSEHDLNGTVNRCTKRPVCEGVASTSNPPADG----VSTSWPDEKQSSA 770
Query: 628 LRYVNCAGMDDCRS----QVPAAWNMVVVTGSRGGAIRAFHNYGLPVRL 672
D C Q +AW +V+VT RGG IR F N+G PV++
Sbjct: 771 KSSPGHCSSDLCIGALDVQRRSAWGLVIVTAGRGGEIRVFQNFGFPVQV 819
>Os11g0187000 WD40-like domain containing protein
Length = 1391
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 162/503 (32%), Positives = 230/503 (45%), Gaps = 75/503 (14%)
Query: 233 LYRTKVHQQNKKWMDFTAVYMCQEIQAHEGLIRVMKFSSSGWHLASGGED---------- 282
L R KVH K + T +Y QE++AHEG I +KFS G LASGGED
Sbjct: 398 LERPKVHSFGKTARELTGMYFRQEVRAHEGSIWSIKFSPDGRFLASGGEDRVVHVWHVVD 457
Query: 283 -----CVVRVWQITEVESSPDLYGRD---VPEDMNKK---------KDVKIKPLAIIPKK 325
+ ++ +S P L + +++K KDV + ++P+
Sbjct: 458 DGAPPSSMSPELLSSSQSLPPLAPHGDGGLAAQLSRKLRARRWKTCKDV-LPEHVVVPET 516
Query: 326 VFSITETPLHEFQGHTSDVLDLAWXXXXXXXXXXXX-XXIRMWKVGCYDCLAVFRHGDYV 384
F++ + P +GH DVLDLAW +R+W CL +F H DYV
Sbjct: 517 AFALADEPACSLEGHLDDVLDLAWSMYSQLLLSSSMDKTVRLWDTEAKACLKLFPHNDYV 576
Query: 385 TCVQFNPVDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYIITAISHRPDGKGFVVGSVK 444
TCVQFNPVD+ YFISGS+D KVR+W V++++VVDW D ++TA + PDG+ +VGS K
Sbjct: 577 TCVQFNPVDDGYFISGSLDSKVRIWSVAERQVVDWSDLDDMVTAACYTPDGQAAIVGSHK 636
Query: 445 GRCRFYDQSGLFPLGRNIERNKLMRI-KRRRCAANKITNIQFSQGHPSRMIITSKDHKIR 503
G CRFY + N E M I K+R+ A KIT QF+ G+PS +++T+ D +IR
Sbjct: 637 GSCRFYKTAD---CKLNQEAQIDMNISKKRKSHAKKITGFQFAPGNPSEILVTTADSQIR 693
Query: 504 VSEGHKITQKFQGQWRSKVLVPPSLTPDGRYLISAGRDSKIRIWNFDXXXXXXX------ 557
V G + QKF+G + + S + DGRY++ + DS + +W
Sbjct: 694 VFNGITVLQKFKGFKNTSSQISASYSGDGRYVVCSSEDSNVYVWRRATSPGGAAGGGVAV 753
Query: 558 ------XXXXXELFFSEGVTAVAPWARAMXXXXXXADAPTLCYDRERCSFGTWFVVPDGX 611
E FF + V+A PW + D ER S V G
Sbjct: 754 KAKTWRTSRAYECFFCKDVSAAVPWPLSPCLPPTRGGG-GGGDDDERASSSVRGAVVGGD 812
Query: 612 XXXXXT-----------------TWPEERLL-----PSLRYVNCAGMDDCRSQVPAAWNM 649
+ T+ E+ L PS R+ A + AW M
Sbjct: 813 ASASRSPARQLGSLPLRPKSGPMTYSGEKQLGVPREPSSRWHGGAEGGN-------AWGM 865
Query: 650 VVVTGSRGGAIRAFHNYGLPVRL 672
VVVT S G IR + N+G+P+ L
Sbjct: 866 VVVTASLAGEIRVYQNFGMPLSL 888
>Os12g0178633 Quinonprotein alcohol dehydrogenase-like domain containing protein
Length = 627
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/490 (30%), Positives = 202/490 (41%), Gaps = 97/490 (19%)
Query: 235 RTKVHQQNKKWMDFTAVYMCQEIQAHEGLIRVMKFSSSGWHLASGGEDCVVRVWQITEVE 294
R KVHQ K + T +YMCQEI AHEG I +KFS+ G LAS GED VVR+WQ+ E
Sbjct: 175 RLKVHQSGKSCKELTGLYMCQEIMAHEGSIWSIKFSTDGRWLASAGEDHVVRIWQVVEAN 234
Query: 295 SSPDLYGRDVPEDMNK----------------------------KKDVKIKP-------L 319
S L P D + KK VK K
Sbjct: 235 SPACL-----PNDGHSGPLPPHPPGAAPADGTSSSSTPALSQLSKKSVKGKSGRDTLPEH 289
Query: 320 AIIPKKVFSITETPLHEFQGHTSDVLDLAWXXXXXXXXXXXXXXIRMWKVGCYDCLAVFR 379
++P KVF++ + P +GH DVLDL W +R+W CL VF
Sbjct: 290 LVVPDKVFALADQPACVLEGHQDDVLDLTWSKTDQLLSSSMDKTVRLWDTTTKACLKVFA 349
Query: 380 HGDYVTCVQFNPVDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYIITAISHRPDGKGFV 439
H DYVTC+QFNP D+R+FISGS+D KVR+W + D++VVDW D ++TA S+ PDG+G +
Sbjct: 350 HNDYVTCIQFNPADDRFFISGSLDAKVRLWSIPDRQVVDWTDLNEMVTAASYTPDGQGAI 409
Query: 440 VGSVKGRCRFYDQSGLFPLGRNIERNKLMRIKRRRCAANKITNIQFSQGHPSRMIITSKD 499
+GS KG CRFY +G G + R++ ++ +D
Sbjct: 410 IGSHKGSCRFYKTTG----GADRHRDEEAQVAGE------------------------ED 441
Query: 500 HKIRVSEGHKITQKFQGQWRSKVLVPPSLTPDGRYLISAGRDSKIRIW------------ 547
H++ G K T + + T DGRY++ DS + +W
Sbjct: 442 HRL---PGFKNTSS---------QISAAYTSDGRYVVCPSEDSHVYLWRAARGAPPAAAA 489
Query: 548 -----NFDXXXXXXXXXXXXELFFSEGVTAVAPWARAMXXXXXXADAPTLCYDRERCSFG 602
E F+ + V+A PW A R +
Sbjct: 490 IGSIGGIGMKPKTWCTIRSFENFYCKDVSAAVPWPLAPSGAGGDGSTSGSSPSRRQGGVS 549
Query: 603 TWFVVPDGXXXXXXTTWPEERLLPSLRYVNCAGMDDCRSQVPAAWNMVVVTGSRGGAIRA 662
V L S + + A AW +VVVT S G IR
Sbjct: 550 CTDDVCSMPAKSGELGSAGTPLTHSGQLGSPAPGGGKGGADGNAWGLVVVTASLQGEIRV 609
Query: 663 FHNYGLPVRL 672
+ N+G+P R+
Sbjct: 610 YQNFGMPFRI 619
>Os02g0638900 WD40-like domain containing protein
Length = 479
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 141/242 (58%), Gaps = 23/242 (9%)
Query: 235 RTKVHQQNKKWMDFTAVYMCQEIQAHEGLIRVMKFSSSGWHLASGGEDCVVRVWQITE-- 292
R KV Q K + + + ++M Q+I+AH G I +KFS G LAS GEDCV+ VW++ E
Sbjct: 217 RVKVRQYGKSYKELSGLFMNQDIKAHSGSIWSIKFSPDGHFLASAGEDCVIHVWEVLEWK 276
Query: 293 --VESSPDLYGRDVPEDM---------NKKKDVKIKPL----------AIIPKKVFSITE 331
E + G PE M +++K ++ K + ++P+ VF+++E
Sbjct: 277 MIEEKGLEENGVFDPESMLVSTASEGSHREKKLRAKAVHNQRSVSSDRLMVPEHVFALSE 336
Query: 332 TPLHEFQGHTSDVLDLAWXXXXXXXXXXXXXXIRMWKVGCYDCLAVFRHGDYVTCVQFNP 391
P+ F GH+ DVLDL+W +R+W V CL F H DYVTC+QFNP
Sbjct: 337 KPVITFAGHSEDVLDLSWSKSQYLLSSSMDKTVRLWHVSSTYCLKTFSHSDYVTCIQFNP 396
Query: 392 VDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYIITAISHRPDGKGFVVGSVKGRCRFYD 451
V+++YFISGS+D KVR+W + ++++VDW D +ITA + PDG+G +VGS KG+C YD
Sbjct: 397 VNDKYFISGSLDKKVRIWSIQERKIVDWIDLHEMITAACYTPDGQGALVGSHKGKCHVYD 456
Query: 452 QS 453
S
Sbjct: 457 IS 458
>Os04g0529400 WD40-like domain containing protein
Length = 150
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 90/134 (67%), Gaps = 5/134 (3%)
Query: 384 VTCVQFNPVDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYIITAISHRPDGKGFVVGSV 443
VTC+QFNPVD+RYFISGS+D KVR+W + + +VDW+D ++TA + PDG+ +VGS
Sbjct: 3 VTCIQFNPVDDRYFISGSLDEKVRIWSIPGREIVDWNDLHEMVTAACYTPDGQRALVGSH 62
Query: 444 KGRCRFYDQSGLFPLGRNIERNKL-MRIKRRRCAANKITNIQFSQGHPSRMIITSKDHKI 502
KG C YD S + +++ ++ ++ K+R+ KIT QF G S+++ITS D +I
Sbjct: 63 KGSCHIYDTSD----NKLLQKKQIDLQNKKRKSNQKKITGFQFLPGSSSKVLITSADSRI 118
Query: 503 RVSEGHKITQKFQG 516
RV +G ++ KF+G
Sbjct: 119 RVVDGFELVHKFKG 132
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 22,125,966
Number of extensions: 898107
Number of successful extensions: 2706
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 2658
Number of HSP's successfully gapped: 11
Length of query: 672
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 565
Effective length of database: 11,448,903
Effective search space: 6468630195
Effective search space used: 6468630195
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)