BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0199600 Os02g0199600|Os02g0199600
(434 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0199600 Cyclin-like F-box domain containing protein 694 0.0
Os04g0258900 Cyclin-like F-box domain containing protein 193 2e-49
Os07g0554100 148 6e-36
Os07g0554200 Cyclin-like F-box domain containing protein 144 2e-34
Os07g0554500 Cyclin-like F-box domain containing protein 137 1e-32
Os07g0554900 Cyclin-like F-box domain containing protein 95 1e-19
Os10g0135300 Cyclin-like F-box domain containing protein 93 4e-19
Os10g0135500 Cyclin-like F-box domain containing protein 84 2e-16
Os07g0555300 Conserved hypothetical protein 84 2e-16
Os07g0555000 Conserved hypothetical protein 84 2e-16
Os10g0135400 Cyclin-like F-box domain containing protein 79 5e-15
Os07g0555100 Conserved hypothetical protein 75 1e-13
Os07g0554600 Conserved hypothetical protein 70 3e-12
>Os02g0199600 Cyclin-like F-box domain containing protein
Length = 434
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/422 (84%), Positives = 358/422 (84%)
Query: 13 ETQVPDDVVDEIXXXXXXXXXXXXXXXXXXXXXXXVSSPRFLRRHRARHGPCPGALLGSF 72
ETQVPDDVVDEI VSSPRFLRRHRARHGPCPGALLGSF
Sbjct: 13 ETQVPDDVVDEILVRLPSRSSLARAAAACSAFRALVSSPRFLRRHRARHGPCPGALLGSF 72
Query: 73 AFSSEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGDDDPRRGLGWIVRDHRD 132
AFSSEGG VVGDDDPRRGLGWIVRDHRD
Sbjct: 73 AFSSEGGAFHPAEPPHASAAAARAVAAAADFSFAFLPPSPVVGDDDPRRGLGWIVRDHRD 132
Query: 133 GRFLLDRVASLDDNVFPELAVCDPLSRRYVVLPPIPRELAAAVDRPLGVIGGRRRCEPFL 192
GRFLLDRVASLDDNVFPELAVCDPLSRRYVVLPPIPRELAAAVDRPLGVIGGRRRCEPFL
Sbjct: 133 GRFLLDRVASLDDNVFPELAVCDPLSRRYVVLPPIPRELAAAVDRPLGVIGGRRRCEPFL 192
Query: 193 APCXXXXXXXXESEPAFAVIWTARCPRKVVAFAFASRDGRWRALPSPECFVWSRHRSPFG 252
APC ESEPAFAVIWTARCPRKVVAFAFASRDGRWRALPSPECFVWSRHRSPFG
Sbjct: 193 APCDADADADAESEPAFAVIWTARCPRKVVAFAFASRDGRWRALPSPECFVWSRHRSPFG 252
Query: 253 CPVHAVWNRRFYAHGCFYWLDCLTHRWLVLDTRAMEITVKQIPSPACYWEEHVAVVEGED 312
CPVHAVWNRRFYAHGCFYWLDCLTHRWLVLDTRAMEITVKQIPSPACYWEEHVAVVEGED
Sbjct: 253 CPVHAVWNRRFYAHGCFYWLDCLTHRWLVLDTRAMEITVKQIPSPACYWEEHVAVVEGED 312
Query: 313 GKVGVFAHDFYRAGGEACLYYYTIVDGGDGPRWRLERTVPLPWPAAHGRPYSIRAAANGS 372
GKVGVFAHDFYRAGGEACLYYYTIVDGGDGPRWRLERTVPLPWPAAHGRPYSIRAAANGS
Sbjct: 313 GKVGVFAHDFYRAGGEACLYYYTIVDGGDGPRWRLERTVPLPWPAAHGRPYSIRAAANGS 372
Query: 373 LILEVSHGTPAFMTSYRSRDVELYRIDVKSFELEMICRARCAAGDIAWAYFGFPPLLSLP 432
LILEVSHGTPAFMTSYRSRDVELYRIDVKSFELEMICRARCAAGDIAWAYFGFPPLLSLP
Sbjct: 373 LILEVSHGTPAFMTSYRSRDVELYRIDVKSFELEMICRARCAAGDIAWAYFGFPPLLSLP 432
Query: 433 TV 434
TV
Sbjct: 433 TV 434
>Os04g0258900 Cyclin-like F-box domain containing protein
Length = 408
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 191/432 (44%), Gaps = 43/432 (9%)
Query: 16 VPDDVVDEIXXXXXXXXXXXXXXXXXXXXXXXVSSPRFLRRHRARHGPCPGALL---GSF 72
+ DDV+ EI +SPRFLRR R+ H P P +L G+
Sbjct: 7 LTDDVLAEILVRVPSSCDLARASAACSSFCRIATSPRFLRRFRSLHAPLPLGVLCPDGAA 66
Query: 73 AFSSEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGDDDPRRGLGWIVRDHRD 132
AF P W++RDHRD
Sbjct: 67 AFHPAMPPHPSAPAARALALAADFAFSFL-----------------PPPARAWLLRDHRD 109
Query: 133 GRFLLDRVASLDDNVFPELAVCDPLSRRYVVLPPIPRELAAAVDRPLGVIGG-----RRR 187
GRFLLDR + F ++AVCDPL RRYV+LPPIP +LAA+V P GG R
Sbjct: 110 GRFLLDRALAGGSTAFTDVAVCDPLFRRYVLLPPIPDDLAASVQNPYLQCGGDGGLQSRS 169
Query: 188 CEPFLAPCXXXXXXXXESEPAFAVIWTARCPRKVVAFAFASRDGRWRALPSPECFVWSRH 247
E FLA C EP FAVIW A C K+VAF F+S +WRAL PE + S
Sbjct: 170 SEIFLASCGSDAGG---EEPLFAVIWMACCRGKLVAFFFSSESQQWRALSPPEHYALSTR 226
Query: 248 RSPFGCPVHAVWNRRFYAHGCFYWLDCLTHRWLVLDTRAMEITVKQIPSP-----ACYWE 302
R + +R +AHGCFYW+ LTHRWLVLDTR ME V I SP A +
Sbjct: 227 RV-----MGVRLGQRNHAHGCFYWMITLTHRWLVLDTRRMEFLVVDI-SPVLSGRAMMFS 280
Query: 303 EHVAVVEGEDGKVGVFAHDFYRAGGEACLYYYTIVDGGDGPRWRLERTVPLPWPAAHGRP 362
+ +E DG V D +R+ LY+Y + D RW+L+ + LP + R
Sbjct: 281 NQIITLESMDGWTIVVVADVFRSDKRCVLYFYKFMYFSD--RWQLQSKINLPEEWGY-RF 337
Query: 363 YSIRAAANGSLILEVSHGTPAFMTSYRSRDVELYRIDVKSFELEMICRARCAAGDIAWAY 422
I A+ L +++ H + ++ + D+K+ +L A+ Y
Sbjct: 338 RGIIGASECYLFIKLDHPKQNLGDPVQ-QNAMYFMFDIKTMQLGRFSEICSGTVSEAYLY 396
Query: 423 FGFPPLLSLPTV 434
GFPP SLP+V
Sbjct: 397 TGFPPSQSLPSV 408
>Os07g0554100
Length = 396
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 150/299 (50%), Gaps = 31/299 (10%)
Query: 125 WIVRDHRDGRFLLDRVASLDDN------VFPELAVCDPLSRRYVVLPPIPRELAAAVDRP 178
W+VRD R GR L+DR + VF E+AVCDPL RR+++LPPIP +LAA+VDRP
Sbjct: 109 WMVRDVRGGRVLVDRDTKAETGGSEKPLVFTEIAVCDPLRRRFLLLPPIPDDLAASVDRP 168
Query: 179 LGVIGGRRRCEPFLAPCXXXXXXXXESEPAFAVIWTARCPRKVVAFAFASRDGRWRALPS 238
+ V R CEPFLAP E + +F VIW A+C K++AF F S G+W A S
Sbjct: 169 VRV-HLDRWCEPFLAP----HIEEEEDDTSFKVIWMAQCKAKIIAFVFNSSTGQWLAGAS 223
Query: 239 PEC-----------FVWSRHRSPFGCPVHAVWNRRFYAHGCFYWLDCLTHRWLVLDTRAM 287
P S S V++ R YA GCF W L LVLDTR M
Sbjct: 224 PSTTDLFNGAGLSPPPSSSSPSLVFSSPGRVFSSRRYACGCFCW-GILRTMLLVLDTRLM 282
Query: 288 EITVKQIPSPACYWEEHVAVVEGEDGKVGVFAHDFYRAGGEACLYYYTIVDGGDGPRWRL 347
+ ++ + P P C A+VE +G G+FA GG L+Y G R ++
Sbjct: 283 KFSIAE-PPPVCLGGP-TAIVEAGEGMTGIFALR-GSVGGTFDLHYSIWGKEGATRREQM 339
Query: 348 ERTVPLPWPAAHGRPYSIRAAANGSLILEVSHGTPAFMTSYRSRDVELYRIDVKSFELE 406
E+ +PL HG Y IR A L+L S G T D+E + +DVK+ +LE
Sbjct: 340 EKIIPL----DHGYRYYIRGAMEKHLLLARSRGEGEEDTPEEP-DLECFSLDVKTLQLE 393
>Os07g0554200 Cyclin-like F-box domain containing protein
Length = 409
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 159/320 (49%), Gaps = 28/320 (8%)
Query: 123 LGWIVRDHRDGRFLLDRVASLDDNVFPE--LAVCDPLSRRYVVLPPIPRELAAAVDRPLG 180
LGW+VRD GRFLLDR + LAVCDPL RR+++LP IP++LAAA
Sbjct: 110 LGWVVRDVLGGRFLLDRDVVEEGAAAASRILAVCDPLFRRHLLLPQIPQDLAAA-----S 164
Query: 181 VIGGRRRCEPFLAPCXXXXXXXXESEPAFAVIWTARCPRKVVAFAFASRDGRWRALPSPE 240
+ RR + F AP +E +F VIW A C K+VAF F+S G+WRA S
Sbjct: 165 ALRQSRRGDTFFAPIGEEECVAAVAETSFKVIWIAECADKLVAFVFSSVTGQWRATAS-- 222
Query: 241 CFVWSRHRSPFGCPVHAVWNRRFYAHGCFYWL--DCLTHRWLVLDTRAMEITVKQIPSPA 298
W F P +RR YA+GCFYW+ D + + LVLD R M+ +V ++PS A
Sbjct: 223 -VCWGDLSPAFSRPACRSMSRRSYAYGCFYWMMGDSVKN-LLVLDMRRMDFSVLELPSSA 280
Query: 299 CYWE-EHVAVVEGEDGKVGVFAHDFYRAGGEACLYYYTIVDGGDGP--RWRLERTVPLPW 355
+ A+VE +GK+G+FA Y AG +Y + + G +W E + +P+
Sbjct: 281 PGHDIVECAIVEEGEGKIGMFAFRNYIAGYALQIYSAKMQNEGKAAAGKWSFETAMVVPF 340
Query: 356 PAAHGRPYSIRAAANGSLILEVSHGTPAFMTSYRSRDVELYRIDVKSFELEMICRARCAA 415
+ I A + L L+V P+F S + + + LE + R
Sbjct: 341 -----DEFGILGATSRELFLKV---PPSFARGCYSLE---FSTNPSCKYLESVRRVISGV 389
Query: 416 -GDIAWAYFGFPPLLSLPTV 434
+++ Y G+PP LS P++
Sbjct: 390 PPSLSFLYVGYPPSLSSPSI 409
>Os07g0554500 Cyclin-like F-box domain containing protein
Length = 414
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 153/326 (46%), Gaps = 36/326 (11%)
Query: 123 LGWIVRDHRDGRFLLDRVASLDDNVFPELAVCDPLSRRYVVLPPIPRELAAAVDR-PLGV 181
L W+VRD DGRFLLDR LAVCDPL RRY +LP IP +LAA+V R P
Sbjct: 111 LSWVVRDVLDGRFLLDRDGGEGGAALRILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRG 170
Query: 182 IGGRRRCEPFLAPC-XXXXXXXXESEPAFAVIWTARCPRKVVAFAFASRDGRWRALPSPE 240
+ R + F AP +E +F VIW A+CP K+VAF F+S G+WRA SP
Sbjct: 171 VAPNGRFDTFFAPIGEEERAAAAVAETSFKVIWIAQCPDKLVAFVFSSVTGQWRATASP- 229
Query: 241 CFVWSRHRSPFGCPVHAVWNRRFYAHGCFYWLDCLTHRWLVLDTRAMEITVKQIP-SPAC 299
W F P RR YA+GCFYW+ + LVLD M ++ ++P SP
Sbjct: 230 --CWGDLSPAFSRPACRSLLRRSYAYGCFYWMMGDSGNLLVLDMCKMNFSIVKLPSSPPG 287
Query: 300 YWEEHVAVVEGEDGKVGVFAH----DFYRAGGEACLYYYTIVDGGD-GPRWRLERTVPLP 354
A+VE +GK+G+FA D Y LY T+ + G +W E + +
Sbjct: 288 RDIVECAIVEAGEGKIGMFAFCNCIDIYALE----LYSTTMQNEGRVASKWSFESAILM- 342
Query: 355 WPAAHGRPYSIRAAANGSLILEVSHGTPA------FMTSYRSRDVELYRIDVKSFELEMI 408
P+ G + + L L+VS + F T+ + +E R ++ +
Sbjct: 343 -PSRDG--FRVLGVTGKELCLQVSPICVSGCYLLEFSTNPSCKKLEFVRRVIRGVRTSL- 398
Query: 409 CRARCAAGDIAWAYFGFPPLLSLPTV 434
+ Y G+PP LS P++
Sbjct: 399 ----------PFLYVGYPPSLSSPSI 414
>Os07g0554900 Cyclin-like F-box domain containing protein
Length = 428
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 152/336 (45%), Gaps = 46/336 (13%)
Query: 125 WIVRDHRDGRFLLDRVASL---DDN----VFPELAVCDPLSRRYVVLPPIPRELAAAVDR 177
W RD RDGR L R DD+ + +LAVCDP S RY +L IP++L
Sbjct: 109 WRRRDVRDGRILFSREEEYYAPDDDGADVLLMDLAVCDPFSGRYAILTEIPQDLI----D 164
Query: 178 PLGVIGGRRRC-EPFLAPCXXXXXXXXESEPA-FAVIWTARCPRKVVAFAFASRDGRWRA 235
PL + G C EPFLAP E A F V++ AR K++AF F G WRA
Sbjct: 165 PLDLEGQSFLCFEPFLAPATAADDDEDEVGGASFRVMYMARGLTKLMAFIFPWEAGEWRA 224
Query: 236 LPSPECFVWSRHRSPFGCPVHAVWNRRFYAHGCFYWLDCLTHRWLVLDTRAMEI-TVKQI 294
+ E W+ + + ++ RF+ HG WL ++ L+LDT ++ T++ +
Sbjct: 225 V---EYDGWAALINGTSTWLAEMF-WRFHVHGNICWLLDWANKLLILDTTTNQLSTIEMV 280
Query: 295 PSPACYWEEHVAVVEGEDGKVGVFA--HDFYRAGGEACLYYYTIVDGGDG-PRWRLERTV 351
P W++ + +E E+G++G+F ++FY + LYY D G +WR+ +
Sbjct: 281 PGS---WKKDIVFLETEEGQLGLFVLINNFYTSFD---LYYAIWQDNDKGVKQWRVIEAI 334
Query: 352 PLPWPAAHGRPYSIRAAANGSLILE-VSHGTP-AFMTSYRSRDVEL-------------Y 396
LP + I G ++L+ + G+ ++ S R +
Sbjct: 335 QLPLNYWYENLLGIDG---GYVLLQGIPKGSKSSWQASSRQNGSSQASESSSEVPEHVCF 391
Query: 397 RIDVKSFELEMICRARCAAGDIAWAYFGFPPLLSLP 432
++VK+F +E C A A + +PP LS P
Sbjct: 392 SVEVKTFRVERFCGTNHAI-KTANLFTSYPPSLSPP 426
>Os10g0135300 Cyclin-like F-box domain containing protein
Length = 415
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 137/321 (42%), Gaps = 33/321 (10%)
Query: 124 GWIVRDHRDGRFLLDRVASLDDNVFPELAVCDPLSRRYVVLPPIPRELAAAVDRPLGVIG 183
GW +R+ R G LL FP++ VCDPL RRY +P IP +LAA + R +
Sbjct: 118 GWRLRNIRRGLALLSTRDGGGGCFFPDVVVCDPLHRRYAQIPQIPDDLAAPIRRSGSLPK 177
Query: 184 GRRRCEPFLAPCXXXXXXXXESEPAFAVIWTARCPRK--VVAFAFASRDGRWRALPSPEC 241
G + LAP E + +F V+ R + + F F+S G WRA
Sbjct: 178 G---FDYLLAPARREEEEEEEEDSSFKVVCRPRLTEECDITVFVFSSGAGIWRAATLGSS 234
Query: 242 FVWSRHRSPFGCPVHAVWNRRFYAHGCFYWLDCLTHRWLVLDTRAMEITV-KQIPSPACY 300
+ +V +R H C YWL R L+LDT ME+++ P +
Sbjct: 235 LATA----------ISVTSRPRCVHRCVYWLTRFLDRLLILDTDEMELSMFDNFPPSTGF 284
Query: 301 WEEHV--AVVEGEDGKVGVFAHDFYRAGGEACLYYYTIVDGGDGPRWRLERTVPLPWPAA 358
H A+ E + ++GVF D + + G +WR ++T+PL P
Sbjct: 285 VLNHTTAAIAEAGEDRLGVFNLDVHNVN-----LLSRAIRGSADEQWRHDKTIPL-LPGY 338
Query: 359 HGRPYSIRAAANGSLILEVSHGTPAFMTSYRSRDVELYRIDVKSFELEMIC-----RARC 413
+ A +G IL + + ++ + +D+K+F LE +C +AR
Sbjct: 339 SIWRFVNHADVDG-YILLGGVLGSGLQSDPITDGLQYFSLDLKTFRLERLCPMTIYQARN 397
Query: 414 AAGDIAWAYFGFPPLLSLPTV 434
+ ++ Y FPP LSL ++
Sbjct: 398 SPTEL---YTSFPPPLSLSSI 415
>Os10g0135500 Cyclin-like F-box domain containing protein
Length = 410
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 137/330 (41%), Gaps = 50/330 (15%)
Query: 119 PRRGLGWIVRDHRDGRFLLD-RVASLDDNVF--PELAVCDPLSRRYVVLPPIPRELAAAV 175
P R W +RD R G +L R A DD F P++ VC+PL RRY +PPI +LAA +
Sbjct: 117 PGRSGDWRLRDVRHGLAVLSTRHAVTDDGCFSFPDVVVCNPLRRRYAWIPPISDDLAAPI 176
Query: 176 DRPLGVIGGRRRCEPFLAPCXXXXXXXXESEPAFAVIWTARCPR--KVVAFAFASRDGRW 233
R LGV G + +AP +F VI + P V F F+S W
Sbjct: 177 -RSLGV--GVEDFDYLVAPAGREGL-------SFRVICRPQLPMGCDVTVFVFSSSAVIW 226
Query: 234 RALPSPECFVWSRHRSPFGCPVHAVWNRRFYAHGCFYW-LDCLTHRWLVLDTRAMEITVK 292
RA C ++ SP YAHG YW L R L+LDTR M+
Sbjct: 227 RAATLHACAATAQLVSP------------QYAHGYAYWRLIRSATRLLLLDTRDMDFFFV 274
Query: 293 QIPSPACYWEEHVAVVEGEDGKVGVFAHDFYRAGGEACLYYYTIVDGGDGPRWRLERTVP 352
+ W+ GE G+VG A + G WR ++T+P
Sbjct: 275 DFEQRSVPWQ-----AIGEAGEVGRLAMFNIAHANHTVELLSGAIRGSADEHWRHDKTIP 329
Query: 353 LPWPAAHGRPYSIRAAANGSLILE---VSHGTPAFMTSYRSRDVELYRIDVKSFELEMIC 409
L G + I A G L+L+ + GT F ++ + +D+ +F+LE +C
Sbjct: 330 L----LPGYKWRILKLAEGYLLLQGRILGDGTSQFTP---GDQLQYFTLDINTFKLERLC 382
Query: 410 RARCAAGDIAW-----AYFGFPPLLSLPTV 434
+ I++ Y FPP LS ++
Sbjct: 383 AS--TPQGISYHPQFELYRCFPPPLSFSSI 410
>Os07g0555300 Conserved hypothetical protein
Length = 253
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 92/216 (42%), Gaps = 21/216 (9%)
Query: 150 ELAVCDPLSRRYVVLPPIPRELAAAVDRPLGVIGGRRRCEPFLAPCXXXXXXXXESEPAF 209
+LAVCDP+SRRYV+LPPIP +L + G G E FLAP + +F
Sbjct: 3 DLAVCDPVSRRYVILPPIPDDLITS-----GEQEGLLVFETFLAPAAKEEEEMVGT-TSF 56
Query: 210 AVIWTARCPRKVVAFAFASRDGRWRALPSPECFVWSRHRS----PFGCPVHAVWNRRFYA 265
V+ A KVV F F+S W S WS + H + R+YA
Sbjct: 57 RVVARANYESKVVIFVFSSLTEEWH---SSRSVSWSLLTADPWLSSTAQAHLWFFPRYYA 113
Query: 266 HGCFYWLDCLTHRWLVLDTRAMEITVKQIPSPACYWEEHVAVVEGEDGKVGVFAHDFYRA 325
H YW+ L LVLDT M W+ A++E E+ +G F +
Sbjct: 114 HFV-YWVMHLVDMLLVLDTSKMAFFTINFQ-----WDRDFAILETEEDMIGAFCLKGDLS 167
Query: 326 GGEACLYYYTIVDG--GDGPRWRLERTVPLPWPAAH 359
G Y +D D P L++T+PLP P H
Sbjct: 168 GRTHLCYGTRRIDADFADSPPLNLDKTIPLPLPLDH 203
>Os07g0555000 Conserved hypothetical protein
Length = 207
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 105/238 (44%), Gaps = 46/238 (19%)
Query: 212 IWTARCPRKVVAFAFASRDGRWR------------ALPSPECFVWSRHRSPFGCPVHAVW 259
++ ARC K+V F F+S +W A PS E + RH
Sbjct: 1 MYMARCQSKLVVFTFSSDTQQWSSTSYDGWGILVAATPSQETALTQRH------------ 48
Query: 260 NRRFYAHGCFYWLDCLTHRWLVLDTRAMEITVKQIPSPACYWEEHVAVVEGEDGKVGVFA 319
+AHGC +W + LVLDT ME++ +PS + VA+VE G +G+FA
Sbjct: 49 ----HAHGCIFWFLRWAKKLLVLDTFTMELSTINLPSSELIEIQQVAIVESARGGIGMFA 104
Query: 320 HDFYRAGGEACLYYYTIVDGGDGPRWRLERTVPLPWPAAHGRPYSIRAAANGSLILE-VS 378
+Y + D +W LER + LP R Y++ AA G L+++ +S
Sbjct: 105 M-VDEILDSTFDMFYVVWDPEGANKWPLERLMKLP---VEFR-YNLVGAAGGYLLVQGIS 159
Query: 379 HGTPAFMTSYRSRDVELYRIDVKSFELEMICRAR--CAAGDIAWAYFGFPPLLSLPTV 434
P +D + +++K+F++EM C R D+ + GF P LS P+V
Sbjct: 160 VQGPV-------QDQVCFTVELKTFKVEMFCETRRTLIGADL---FAGFAPSLSPPSV 207
>Os10g0135400 Cyclin-like F-box domain containing protein
Length = 386
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 134/333 (40%), Gaps = 58/333 (17%)
Query: 119 PRRGLGWIVRDHRDGRFLLDRVASL-------DDNVFPELAVCDPLSRRYVVLPPIPREL 171
P GW +RD R G LL +S D FP++ VCDP+ RR+V +PPIP +L
Sbjct: 95 PDHAAGWRLRDVRHGLALLSSSSSSSYLSPLGDRGFFPDVVVCDPMRRRHVRVPPIPDDL 154
Query: 172 AAAVDRPLGVIGGRRRCEPFLAPCXXXXXXXXESEPAFAVIWTARCPRK--VVAFAFASR 229
A V R + LAP +F V+ + P++ V F F+S
Sbjct: 155 TAGVRRI-----AVEHFDYLLAPA-------GRDGSSFRVVCRPKLPKQCDVTVFVFSSG 202
Query: 230 DGRWRALPSPECFVWSRHRSPFGCPVHAVWNRRFYAHGCFYWLDCLTHRWLVLDTRAMEI 289
WRA C + P HG YW + L+LDTR M+
Sbjct: 203 AAFWRAAVLDACAATEKLFLPQS------------VHGYVYWRTHSSGTLLMLDTRDMDF 250
Query: 290 TVKQIPSPACYWEEHVAVVEGEDGKVGVFAHDFYRAGGEACLYYYTIVDGGDGPRWRLER 349
I + C E E G++ VF + G + GG WR +R
Sbjct: 251 FFVNIQTNKCVIGE-----AEEVGRLAVF-NTIVDVGVHKVEILSKAIRGGADEPWRHDR 304
Query: 350 TVPLPWPAAHGRPYSIRAA--ANGSLILEVSHGTPAFMTSYRSRDVELYRIDVKSFELEM 407
T+PL P Y RAA A G L+L G ++ T ++ + +D+K+ +LE
Sbjct: 305 TIPL-LPG-----YKWRAARMAEGYLLLHGIVGNNSWSTP--GIQLQHFTLDLKTLKLES 356
Query: 408 IC------RARCAAGDIAWAYFGFPPLLSLPTV 434
+C R D+ Y FPP LSL ++
Sbjct: 357 LCDSISRGRHHHPQFDL---YRSFPPPLSLSSI 386
>Os07g0555100 Conserved hypothetical protein
Length = 402
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 124/328 (37%), Gaps = 66/328 (20%)
Query: 124 GWIVRDHRDGRFLLDRVASLDDNV--------FPELAVCDPLSRRYVVLPPIPRELAAAV 175
GW D RDGR L+ DD F AVCDPL +RYV+LPP+P +L A
Sbjct: 96 GWFPLDARDGRVLIQSKYFPDDPDGGDFPRPRFMNYAVCDPLFKRYVMLPPVPDDLTANE 155
Query: 176 DRPLGVIGGRRRCEPFLAPCXXXXXXXXESEPAFAVIWTARCPRKVVAFAFASRDGRWRA 235
G + C LAP E++ +F VI AR +VAF F+S +W
Sbjct: 156 ----GSLVDFGLC---LAP-----SQEDEADTSFRVICVARYNTNLVAFVFSSVTRQWGI 203
Query: 236 LPSPECFVWS---------RH-RSPFGCPVHAVWNRRFYAHGCFYWLDCLTHRWLVLDTR 285
S WS RH S F C GCFYW + LVLD
Sbjct: 204 GSSS---TWSSLGTEEPPNRHGLSCFDC-----------VDGCFYWTVPSADKILVLDAI 249
Query: 286 AMEITVKQIPSPACYWEEHVAVVEGEDGKVGVFAHDFYRAGGEACLYYYTIVDGGDGPRW 345
ME +V V+ E G G+ Y E + P
Sbjct: 250 KMEFSVINYAHRVEDGFRACIAVDTE-GTPGMLTVGEYLGNREFRFSRIAKQSDRESPNE 308
Query: 346 RL-ERTVPLPWPAAHGRPYSIRAAANGSLIL---------EVSHGTPAFMTSYRSRDVEL 395
RL E + LP ++ Y AA G + L E S +M ++E
Sbjct: 309 RLSENIIQLP---SNCNKYFTLGAAEGFIFLRGIPEEEKVEDSSSEDLYMD---PEEIEY 362
Query: 396 YRIDVKSFELEMICRARCAAGDIAWAYF 423
Y ++VK+ E EM+C A D+ YF
Sbjct: 363 YSLNVKTVEFEMVC-----AMDMDKCYF 385
>Os07g0554600 Conserved hypothetical protein
Length = 256
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 16/118 (13%)
Query: 125 WIVRDHRDGRFLLDRVASLDD------NVFPELAVCDPLSRRYVVLPPIPRELAAAVDRP 178
W +R DGR+LL + D + E AVCDPL RRY++LPPIP +LA+ V++
Sbjct: 114 WCLRHFSDGRYLLSAIPERSDPAPDHRALVREFAVCDPLYRRYLLLPPIPDDLASVVNQS 173
Query: 179 LGVIGGRRRCEPFLAPCXXXXXXXXESEPAFAVIWTARCPRKVVAFAFASRDGRWRAL 236
V EPFL P E + F VI A+C K+VAF ++ G+W A+
Sbjct: 174 EIV-----NFEPFLCP-----ATEDEEDTMFRVICLAQCEAKLVAFTYSRCSGQWHAV 221
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.142 0.486
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,982,280
Number of extensions: 708758
Number of successful extensions: 2016
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1975
Number of HSP's successfully gapped: 13
Length of query: 434
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 330
Effective length of database: 11,605,545
Effective search space: 3829829850
Effective search space used: 3829829850
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)