BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0198800 Os02g0198800|AK105560
(328 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0198800 Protein of unknown function DUF868, plant fami... 470 e-133
Os01g0909400 Protein of unknown function DUF868, plant fami... 185 3e-47
Os07g0572300 Protein of unknown function DUF868, plant fami... 179 4e-45
Os03g0806700 Protein of unknown function DUF868, plant fami... 176 2e-44
Os05g0108400 Protein of unknown function DUF868, plant fami... 160 2e-39
AK069886 100 2e-21
Os08g0439600 Protein of unknown function DUF868, plant fami... 91 1e-18
Os08g0557300 Protein of unknown function DUF868, plant fami... 91 1e-18
Os09g0567200 91 1e-18
Os06g0181800 79 7e-15
Os11g0150100 Protein of unknown function DUF868, plant fami... 75 7e-14
>Os02g0198800 Protein of unknown function DUF868, plant family protein
Length = 328
Score = 470 bits (1210), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/328 (75%), Positives = 247/328 (75%)
Query: 1 MHKRSKSCEPSSEMDEXXXXXXXXXXXATTCDDXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
MHKRSKSCEPSSEMDE ATTCDD
Sbjct: 1 MHKRSKSCEPSSEMDERRRRGGVGGNGATTCDDSACGARAAASSASSSSSSATTSHCSSV 60
Query: 61 XXYRAKINGAPRHVTAVWHRTLINQSFTISIXXXXXXXXXXXXXXXLSHKVELKPWPFWS 120
YRAKINGAPRHVTAVWHRTLINQSFTISI LSHKVELKPWPFWS
Sbjct: 61 SVYRAKINGAPRHVTAVWHRTLINQSFTISIDGGGGGGAGAGDDGALSHKVELKPWPFWS 120
Query: 121 KRGAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGDGKKDAFKR 180
KRGAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGDGKKDAFKR
Sbjct: 121 KRGAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGDGKKDAFKR 180
Query: 181 TRSRPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGPREPEMRITVDG 240
TRSRPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGPREPEMRITVDG
Sbjct: 181 TRSRPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGPREPEMRITVDG 240
Query: 241 VVLVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGGPAAQAVFVFKPXXXXXXXXX 300
VVLVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGGPAAQAVFVFKP
Sbjct: 241 VVLVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGGPAAQAVFVFKPGAPPPGGDR 300
Query: 301 XXXXXXXXXXXXXXXXXYSFFLQAWKTE 328
YSFFLQAWKTE
Sbjct: 301 CGRRGGAGAGGIGDEGGYSFFLQAWKTE 328
>Os01g0909400 Protein of unknown function DUF868, plant family protein
Length = 325
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 147/253 (58%), Gaps = 27/253 (10%)
Query: 63 YRAKINGAPRHVTAVWHRTLINQSFTISIXXXXXXXXXXXXXXXL--------------- 107
YRA+I+G R VT W R L+ ++SI
Sbjct: 42 YRAEISGHRRLVTVTWCRNLLTHGLSVSIEGSAGNGKDKIGREYGEAAVAATAADGGGGG 101
Query: 108 -------SHKVELKPWPFWSKRGAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVAL 160
+ KVE++PW FW K GAK VDG+ +D+VWDLRSA+F + PEP + YYVA+
Sbjct: 102 GGGKSCSACKVEMQPWHFWRKYGAKQFQVDGNAIDVVWDLRSARF-SDEPEPLSDYYVAV 160
Query: 161 VSRDEVVLLLGDGKKDAFKRTRSRPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEI 220
V+ +EVVLLLG+ KKDAF+RT SRPSL DAVLV ++E V ++ F +A + K H+I
Sbjct: 161 VAGEEVVLLLGNLKKDAFRRTGSRPSLQDAVLVCKKEHVFSKKRFVTKARFSDRGKLHDI 220
Query: 221 VVD---SAIAGPREPEMRITVDGVVLVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIF 277
++ S + G + +M I +DG V V VR LQWKFRGNE + +++ VQV WD HDW+F
Sbjct: 221 SIECSSSNLTGGTDVDMAIKIDGCVSVLVRHLQWKFRGNECISINKLKVQVYWDAHDWLF 280
Query: 278 AGGPAAQAVFVFK 290
G A+F+FK
Sbjct: 281 GTG-MRHALFIFK 292
>Os07g0572300 Protein of unknown function DUF868, plant family protein
Length = 284
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 143/266 (53%), Gaps = 12/266 (4%)
Query: 63 YRAKINGAPRHVTAVWHRTLINQSFTISIXXXXXXXXXXXXXXXLSHKVELKPWPFWSKR 122
Y A++ G VT W + + Q+ ++++ K E+KPW F ++
Sbjct: 31 YLARLRGKSCSVTVTWSKMTMGQALSVAVDDSSNRCLC---------KAEIKPWLFSKRK 81
Query: 123 GAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGDGKKDAFKRTR 182
G+K ++VDG LDIVWDL SAKF A+ PEP G+YVALV E VL+LGD +KD R
Sbjct: 82 GSKAMEVDGGALDIVWDLSSAKF-AAGPEPVEGFYVALVCDLEAVLVLGDMRKDGDHRVS 140
Query: 183 SRPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGPREPEMRITVDGVV 242
S +AV+++R+E V G++ ++A+A + H I ++ +G ++P + I +
Sbjct: 141 SDVLASNAVMIARKEHVYGKKVYSAKARFLDIGQLHHITIECDTSGLKDPSLEIRIGKKR 200
Query: 243 LVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGGPAAQAVFVFKPXXXXXXXXXXX 302
++ V+ L WKFRGN+TV VD PV+VLWDVHDW+F G AVF+F+
Sbjct: 201 VMQVKRLAWKFRGNQTVYVDGLPVEVLWDVHDWLF-GSSNKCAVFLFQS-GQSMEKLLSR 258
Query: 303 XXXXXXXXXXXXXXXYSFFLQAWKTE 328
++ L AWKTE
Sbjct: 259 SCSQNEKELQAHRFGFTLILNAWKTE 284
>Os03g0806700 Protein of unknown function DUF868, plant family protein
Length = 291
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 138/228 (60%), Gaps = 11/228 (4%)
Query: 63 YRAKINGAPRHVTAVWHRTLINQSFTISIXXXXXXXXXXXXXXXLSHKVELKPWPFWSKR 122
Y+A+ +G P ++ W ++L+ Q +I + K ++KPW F K+
Sbjct: 38 YQAQFSGRPCVISVTWSKSLMGQGLSIGVDDLSNQCLC---------KADIKPWLFSKKK 88
Query: 123 GAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGDGKKDAFKRTR 182
G+K LDV+ +++I WDL AKF A PEP G+YVA+V E++LLLGD KKDA+++T
Sbjct: 89 GSKRLDVEDGKIEIFWDLSGAKFGAG-PEPMEGFYVAVVFDLELILLLGDMKKDAYRKTG 147
Query: 183 SRPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGPREPEMRITVDGVV 242
+ + +A V+RRE + G++ + A+A + H++V++ ++P + I VD
Sbjct: 148 ANRPMLNAAFVARREHIYGKKIYTAKAQFCENGQFHDVVIECDTVSLKDPCLEIRVDKKP 207
Query: 243 LVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGGPAAQAVFVFK 290
++ V+ L WKFRGN+T++VD PV+V WDVH W+F G + AVF+F+
Sbjct: 208 VMQVKRLAWKFRGNQTILVDGLPVEVFWDVHSWLF-GLTTSNAVFMFQ 254
>Os05g0108400 Protein of unknown function DUF868, plant family protein
Length = 306
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 147/274 (53%), Gaps = 17/274 (6%)
Query: 63 YRAKINGAPRHVTAVWHRTLINQSFTISIXXXXXXXXXXXXXXXLSHKVELKPWPFWSKR 122
YRAKI G R +T W R +++ SF +S+ +V+L+PW FW +
Sbjct: 42 YRAKIAGHSRVLTVSWSRDMLSHSFAVSVTGVDGASAEC--------RVDLRPWQFWRRA 93
Query: 123 GAKTLDVDGD---RLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGDGKKDAFK 179
G++ +++ G + ++WDLR A+F A PEP +GYYVA+ + EVVL++GD +KDA +
Sbjct: 94 GSRRVELAGTAPATVRVMWDLRRARFGAGLPEPRSGYYVAVEAAGEVVLVVGDMRKDALR 153
Query: 180 RTRSRPSLD--DAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGPR---EPEM 234
R R + DAV V+RRE V G+R FAA+A H+I ++ G + EM
Sbjct: 154 RASPRAAPAACDAVPVARREHVFGKRRFAAKARFHDQGTVHDIAIECGGGGEGGDADMEM 213
Query: 235 RITVDGVVLVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGGPAAQAVFVFKPXXX 294
I +DG V V+ LQWKFRGN++V ++ V++ WDVHDW+F+ G A+F+F+P
Sbjct: 214 TIAIDGEEAVQVKHLQWKFRGNQSVTFSRAKVEIYWDVHDWLFSAG-MRPALFIFRPIVL 272
Query: 295 XXXXXXXXXXXXXXXXXXXXXXXYSFFLQAWKTE 328
+ +L AWK +
Sbjct: 273 SSASAPAAAMLLDGSPPPPPATGFCLYLYAWKLD 306
>AK069886
Length = 349
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 98/176 (55%), Gaps = 11/176 (6%)
Query: 121 KRGAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGDGKKDAFKR 180
++G+ T + + WD +A++ A+ PEP +GYYVA+V+ E VLLLGD + +R
Sbjct: 114 RKGSGTFTAGSCVVGVFWDFAAARY-AAGPEPVSGYYVAVVADAEFVLLLGDMSRGYVER 172
Query: 181 TRSRPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGPREPEMRITVDG 240
+ + + RRE G ++ RA +H+IVV A+ G + E +TVDG
Sbjct: 173 LHGGIPIAGSRMARRRERFVGCGCWSTRARFLESGAEHDIVV--ALDG--DAEAWVTVDG 228
Query: 241 VVLVHVRSLQWKFRGNETVIVD-QSPVQVLWDVHDWIFAGG---PAAQ--AVFVFK 290
+V +R L+W FRG+ T+ +D +PV + WD+H W+F PA+ AVF F+
Sbjct: 229 RKVVQLRRLRWNFRGSHTLFLDGGAPVDMTWDLHGWLFHAADPSPASSCAAVFTFQ 284
>Os08g0439600 Protein of unknown function DUF868, plant family protein
Length = 406
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 106/194 (54%), Gaps = 34/194 (17%)
Query: 113 LKPWPFWSKRGAKTLDVDGDR-LDIVWDLRSAKFPAS-SPEPAAGYYVALVSRDEVVLLL 170
++PW W +RG + GDR +D+ WDL A+FP S SPEP++G++VA+V E+VL
Sbjct: 87 VRPWLLWRRRGTRRFRAAGDRRVDLAWDLTRARFPGSGSPEPSSGFFVAVVVDGEMVLAA 146
Query: 171 GD------GKKDAFKRTRSRPSLDDAVLVSRRESV----SGRRTFAARAPLAAGRKDHEI 220
GD + A + RP VL+SRRE V +GR R+ + K+ EI
Sbjct: 147 GDLSDAAYRRTRARRPAGPRP-----VLLSRREHVAMRDAGRGGRGHRSWVTVRGKEREI 201
Query: 221 VVD-----------SAIAGPREPE-----MRITVDGVVLVHVRSLQWKFRGNETV-IVDQ 263
VD S+ + RE + + +++DG ++HVR L+WKFRG+E V +
Sbjct: 202 SVDLVSRGRGRDTGSSGSSSREKDRADVGLSVSIDGERVLHVRRLRWKFRGSERVDLGGG 261
Query: 264 SPVQVLWDVHDWIF 277
VQ+ WD+H+W+F
Sbjct: 262 DRVQLSWDLHNWLF 275
>Os08g0557300 Protein of unknown function DUF868, plant family protein
Length = 300
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 12/166 (7%)
Query: 121 KRGAKTL-DVDGDRLDIVWDLRSAKFPA-SSPEPAAGYYVALVSRDEVVLLLGDGKKDAF 178
KRG+++L G + + WD A + + SSPEP YY+A+V+ E+ LLLG+G
Sbjct: 90 KRGSRSLATAAGTAVGVHWDTAEATYASGSSPEPTGDYYLAVVADAELALLLGEGGA--- 146
Query: 179 KRTRSRPSLDD---AVLVSRRESVSGRRT-FAARAPLAAGRKDHEIVVDSA--IAGPREP 232
R SR DD AV++SRRE + G T R G +HE+ V + G E
Sbjct: 147 ARDLSRRFGDDGGGAVVLSRREQLRGAATAHTTRCRFREGGAEHEVAVHATRGGGGGGEG 206
Query: 233 EMRITVDGVVLVHVRSLQWKFRGNE-TVIVDQSPVQVLWDVHDWIF 277
E+R+++DG + VR + W FRGN V+ D V V+WDVHDW F
Sbjct: 207 EVRVSIDGKRVAEVRRVGWGFRGNRAAVLADGEVVDVMWDVHDWWF 252
>Os09g0567200
Length = 391
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 99/188 (52%), Gaps = 19/188 (10%)
Query: 121 KRGAKTLDVD-GDRLDIVWDLRSAKFPA---SSPEPAAGYYVALVSRDEVVLLLGDGKKD 176
KRG ++ + G + I WD AK+PA SSPEP YY+A+V+ E+ +LLG G+
Sbjct: 111 KRGTRSFVTEAGTVVAIYWDTTDAKYPAAGSSSPEPTRDYYLAVVADGELAVLLGGGEA- 169
Query: 177 AFKRTRSRPSLDDAVLVSRRESV-----------SGRRTFAARAPLAAGRKDHEI--VVD 223
A + R + L+SRRE + + + R A +HE+ V
Sbjct: 170 ARELARRFAAAPRRALLSRREQLRAAPASPAAMAAAAVAHSTRCRFRADGAEHEVAVVCR 229
Query: 224 SAIAGPREPEMRITVDGVVLVHVRSLQWKFRGNETVIV-DQSPVQVLWDVHDWIFAGGPA 282
G R+ E+ +++DG +V R ++W FRGN T ++ D + V+V+WDVHDW FAGG
Sbjct: 230 GEEWGTRDGEVAVSIDGKKVVEARRVKWNFRGNRTAVLGDGAVVEVMWDVHDWWFAGGGG 289
Query: 283 AQAVFVFK 290
A F+ K
Sbjct: 290 GGAQFMVK 297
>Os06g0181800
Length = 351
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 119 WSKRGAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGDGKKDAF 178
W +RG K G + WD+ A+ PEP A Y + V + G+ A
Sbjct: 77 WRRRGCKRFAGGGHAVAFTWDMSRARLAGRRPEPVARYSLH-------VCVDGELVLAAG 129
Query: 179 KRTRSRPSLDDAVLVSRRESV---SGRRTFAARAPLAAGRKDHEIVVDSAIAGPREPEMR 235
PS L++RRE+ G +A +A GR + I V+ A+ M
Sbjct: 130 DLALLAPSA--GFLLTRRENAVAAGGGEAYATTVAVAGGRHEVSIAVEDAV-------MW 180
Query: 236 ITVDGVVLVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGGPAAQAVFVFK 290
+ +DG + VR L+WKFRG+E + + + V+V WD+H W+FA A AVFV +
Sbjct: 181 VAIDGEKALQVRRLRWKFRGSERLDLPRGRVRVSWDLHGWLFA--ADAVAVFVLR 233
>Os11g0150100 Protein of unknown function DUF868, plant family protein
Length = 338
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 134 LDIVWDLRSAKF--PASSPEPAAGYYVALVSRDEVVLLLGDGK----KDAFKRTRSRPSL 187
L + WDL +A++ ASSPEP +GYYV V+ EVVL +GD K F+ R +
Sbjct: 142 LALFWDLTAARYDPAASSPEPVSGYYVVAVASAEVVLAVGDLAAEFVKAKFEGQIPRARV 201
Query: 188 DDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGPREP----EMRITVDGVVL 243
V R AAR A G +HE+ V A A P E+ + VDG
Sbjct: 202 APVSRVERVVVSDPAAMHAARVRFAEGGPEHEVSVSCAPAAPGSGGGGDELWVCVDGKRA 261
Query: 244 VHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGGPAAQAVFV 288
V L+W FRGN+TV VD +PV V+WD+H W F P V +
Sbjct: 262 VQACRLRWNFRGNQTVFVDGAPVDVMWDLHGWWFREPPGCAVVML 306
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.134 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,002,095
Number of extensions: 333898
Number of successful extensions: 816
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 787
Number of HSP's successfully gapped: 11
Length of query: 328
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 227
Effective length of database: 11,762,187
Effective search space: 2670016449
Effective search space used: 2670016449
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)