Os11g0150100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF868, plant family protein.
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Os11g0150100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF868, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 102.75 | 0.476 | 11.7 | -0.409 | 1.07 | -0.562 | 0.518 | 9.18 | -0.578 | 15.3 | 29.91 | 4004 | -- | -- |
| 106.56 | 0.481 | 11.9 | -1.78 | 1.03 | 0.519 | 0.302 | -- | -0.567 | 15.2 | 31.31 | 4776 | -- | -- |
| 103.6 | 0.474 | 11.7 | -0.395 | 1.07 | -0.576 | -- | 9.23 | -0.578 | 15.4 | 29.97 | 3974 | -- | -- |
| 105.77 | 0.479 | 11.9 | -1.8 | 1.02 | 0.565 | -- | -- | -0.624 | 15.4 | 26.58 | 4718 | -- | -- |
| 165.35 | 0.602 | 11.9 | -1.83 | -- | 1.28 | -- | -2.11 | -0.654 | -- | 29.91 | 3416 | -- | -- |
| 116.4 | 0.506 | 11.9 | -1.67 | 1.02 | -- | 0.394 | -- | -0.669 | 15.4 | -- | -- | -- | -- |
| 116.89 | 0.506 | 11.9 | -1.66 | 1.02 | -- | -- | -- | -0.666 | 15.4 | -- | -- | -- | -- |
| 131.88 | 0.537 | 11.9 | -1.88 | -- | 1.48 | -- | -- | -0.714 | -- | 26.58 | 4718 | -- | -- |
| 187.55 | 0.641 | 11.9 | -- | 0.933 | 0.397 | -- | -- | -0.484 | 15.5 | 26.58 | 4718 | -- | -- |
| 175.51 | 0.619 | 11.9 | -1.71 | -- | -- | -- | -- | -0.693 | -- | -- | -- | -- | -- |
| 189.9 | 0.645 | 11.9 | -- | 1.05 | -- | -- | -- | -0.481 | 15.4 | -- | -- | -- | -- |
| 206.92 | 0.67 | 11.8 | -- | -- | -1.06 | -- | -- | -0.174 | -- | 13.9 | 47520 | -- | -- |
| 252.42 | 0.742 | 11.9 | -- | -- | -- | -- | -- | -0.504 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.98 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 18 |
| 3 | 96.19 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 6 | 96.76 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 8 | 97.12 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 9 | 97.27 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 18 | 14 |
| 12 | 97.37 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 26 | 98.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 29 | 98.48 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 17 | 6 |
| 45 | 99.03 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 55 | 99.34 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 16 |
| 67 | 99.55 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 70 | 99.62 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 77 | 99.86 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 82 | 99.93 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 11 |
| 89 | 100.06 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 91 | 100.09 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 92 | 100.09 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 94 | 100.12 | temperature | 30.0 | 10 | < th | dose dependent | sin | 23 | NA |
| 98 | 100.15 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 104 | 100.23 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 107 | 100.27 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 110 | 100.30 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 15 | 8 |
| 120 | 100.40 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 3 | 3 |
| 128 | 100.47 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 16 |
| 135 | 100.55 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 2 | 5 |
| 136 | 100.57 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 8 | 10 |
| 142 | 100.63 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 9 |
| 147 | 100.67 | humidity | 80.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 148 | 100.67 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 21 |
| 165 | 100.76 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 187 | 100.90 | humidity | 70.0 | 90 | > th | dose independent | rect. | 13 | 10 |
| 217 | 101.21 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 221 | 101.24 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 222 | 101.24 | temperature | 20.0 | 270 | > th | dose dependent | sin | 2 | NA |
| 228 | 101.27 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 242 | 101.37 | humidity | 70.0 | 90 | > th | dose independent | rect. | 15 | 8 |
| 253 | 101.43 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 13 | 10 |
| 282 | 101.61 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 292 | 101.65 | temperature | 25.0 | 30 | > th | dose independent | rect. | 18 | 14 |
| 296 | 101.66 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 310 | 101.75 | temperature | 10.0 | 270 | > th | dose dependent | sin | 2 | NA |
| 327 | 101.85 | temperature | 10.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 331 | 101.86 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 342 | 101.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 389 | 102.10 | temperature | 25.0 | 270 | > th | dose independent | sin | 4 | NA |
| 415 | 102.19 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 418 | 102.21 | temperature | 10.0 | 10 | > th | dose dependent | sin | 23 | NA |
| 424 | 102.24 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 427 | 102.24 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 510 | 102.45 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 512 | 102.45 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 22 |
| 535 | 102.49 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 538 | 102.49 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 589 | 102.67 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 12 |
| 598 | 102.69 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 625 | 102.74 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 10 | 10 |
| 645 | 102.76 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 648 | 102.76 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 22 | 9 |
| 651 | 102.77 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 10 | 19 |
| 669 | 102.81 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 671 | 102.81 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 679 | 102.83 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 685 | 102.85 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 711 | 102.91 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 734 | 102.96 | temperature | 25.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 762 | 103.01 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 785 | 103.03 | temperature | 30.0 | 1440 | > th | dose dependent | sin | 6 | NA |
| 802 | 103.04 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 829 | 103.07 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 842 | 103.08 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 863 | 103.12 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 17 | 19 |
| 901 | 103.18 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 911 | 103.19 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 917 | 103.20 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 930 | 103.21 | temperature | 30.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 932 | 103.21 | humidity | 70.0 | 90 | > th | dose independent | rect. | 17 | 6 |