Os07g0572300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF868, plant family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0572300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF868, plant family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.11 | 0.493 | 10.1 | -1.32 | 2.41 | 1.58 | -1.1 | -1.84 | -0.391 | 16.2 | 21.97 | 1234 | -- | -- |
| 110.3 | 0.489 | 10 | -0.893 | 2.24 | 1.59 | -1.09 | -- | -0.276 | 16.2 | 20.5 | 2227 | -- | -- |
| 113.02 | 0.495 | 10.1 | -1.34 | 2.41 | 1.58 | -- | -1.92 | -0.379 | 16.3 | 22.76 | 1256 | -- | -- |
| 113.98 | 0.497 | 10 | -0.889 | 2.28 | 1.57 | -- | -- | -0.281 | 16.2 | 20.78 | 2286 | -- | -- |
| 225.05 | 0.699 | 10.1 | -1.63 | -- | 3.11 | -- | -3.52 | -0.542 | -- | 20.78 | 237 | -- | -- |
| 179.48 | 0.628 | 9.93 | -0.305 | 2.24 | -- | -1.11 | -- | 0.0716 | 16.5 | -- | -- | -- | -- |
| 182.71 | 0.633 | 9.94 | -0.313 | 2.24 | -- | -- | -- | 0.0657 | 16.6 | -- | -- | -- | -- |
| 233.82 | 0.712 | 10 | -1.13 | -- | 3.21 | -- | -- | -0.495 | -- | 18 | 242 | -- | -- |
| 131.26 | 0.534 | 9.97 | -- | 2.32 | 1.3 | -- | -- | -0.118 | 16.2 | 21.88 | 2339 | -- | -- |
| 450.28 | 0.992 | 9.92 | -0.399 | -- | -- | -- | -- | 0.00677 | -- | -- | -- | -- | -- |
| 185.29 | 0.637 | 9.93 | -- | 2.25 | -- | -- | -- | 0.1 | 16.6 | -- | -- | -- | -- |
| 262.64 | 0.755 | 10 | -- | -- | 2.68 | -- | -- | -0.341 | -- | 20.59 | 252 | -- | -- |
| 454.49 | 0.995 | 9.91 | -- | -- | -- | -- | -- | 0.0511 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 3 | 107.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 10 | 108.00 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 16 | 108.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 39 | 108.67 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 49 | 108.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 12 |
| 87 | 109.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 163 | 109.83 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 170 | 109.85 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 19 |
| 283 | 110.37 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 285 | 110.38 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 299 | 110.41 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 319 | 110.50 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 348 | 110.59 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 6 |
| 392 | 110.78 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 10 |
| 397 | 110.79 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 20 |
| 428 | 110.89 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 13 |
| 436 | 110.90 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 19 |
| 443 | 110.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 446 | 110.92 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 19 |
| 493 | 111.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 496 | 111.02 | radiation | 1 | 1440 | < th | dose dependent | sin | 13 | NA |
| 512 | 111.06 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 19 |
| 525 | 111.08 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 22 |
| 533 | 111.10 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 537 | 111.10 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 549 | 111.14 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 557 | 111.16 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 21 |
| 611 | 111.27 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 612 | 111.27 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 615 | 111.27 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 632 | 111.31 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 654 | 111.35 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 697 | 111.43 | wind | 5 | 43200 | > th | dose dependent | sin | 18 | NA |
| 746 | 111.53 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 769 | 111.57 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 777 | 111.58 | radiation | 1 | 4320 | < th | dose independent | rect. | 16 | 14 |
| 783 | 111.58 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 19 |
| 804 | 111.63 | wind | 5 | 43200 | > th | dose independent | sin | 2 | NA |
| 805 | 111.63 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 808 | 111.64 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 856 | 111.72 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 900 | 111.78 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 3 |