BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0183000 Os02g0183000|Os02g0183000
(232 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0183000 Protein of unknown function DUF597 family protein 483 e-137
Os06g0666100 Protein of unknown function DUF597 family protein 198 2e-51
Os02g0172800 Similar to Zinc-binding protein 192 2e-49
Os02g0692700 Protein of unknown function DUF597 family protein 126 1e-29
Os04g0591100 Protein of unknown function DUF597 family protein 125 4e-29
Os08g0560300 Protein of unknown function DUF597 family protein 114 6e-26
Os01g0517800 Protein of unknown function DUF597 family protein 108 3e-24
Os01g0518000 Protein of unknown function DUF597 family protein 104 5e-23
Os02g0661400 96 2e-20
Os10g0574700 Protein of unknown function DUF597 family protein 91 7e-19
Os09g0116100 Protein of unknown function DUF597 family protein 88 5e-18
Os02g0193400 85 4e-17
Os09g0118900 83 2e-16
AK064470 69 2e-12
>Os02g0183000 Protein of unknown function DUF597 family protein
Length = 232
Score = 483 bits (1243), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 1 MWKPAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCTSICPHCVAAHRVHRLLQVRRY 60
MWKPAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCTSICPHCVAAHRVHRLLQVRRY
Sbjct: 1 MWKPAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCTSICPHCVAAHRVHRLLQVRRY 60
Query: 61 VYHDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQNRQFKGSGNICTSCDRSLQEPY 120
VYHDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQNRQFKGSGNICTSCDRSLQEPY
Sbjct: 61 VYHDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQNRQFKGSGNICTSCDRSLQEPY 120
Query: 121 FHCSLDCKVEYILRQKKDLSAYLRPCKTLQLGPDFFIPHDADDETTHSTLVDVDEPMGSS 180
FHCSLDCKVEYILRQKKDLSAYLRPCKTLQLGPDFFIPHDADDETTHSTLVDVDEPMGSS
Sbjct: 121 FHCSLDCKVEYILRQKKDLSAYLRPCKTLQLGPDFFIPHDADDETTHSTLVDVDEPMGSS 180
Query: 181 DSENLSAPCPNFVRKKRSGPYICARSANRVSDDDMATNMSRRKGVPHRSPLC 232
DSENLSAPCPNFVRKKRSGPYICARSANRVSDDDMATNMSRRKGVPHRSPLC
Sbjct: 181 DSENLSAPCPNFVRKKRSGPYICARSANRVSDDDMATNMSRRKGVPHRSPLC 232
>Os06g0666100 Protein of unknown function DUF597 family protein
Length = 261
Score = 198 bits (504), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 108/142 (76%)
Query: 2 WKPAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCTSICPHCVAAHRVHRLLQVRRYV 61
+P W+ L + FF+ C HE KKNEKNI CL CC SICPHC +HR H LLQVRRYV
Sbjct: 3 MRPGWVGGLVEESFFVGCPAHESRKKNEKNIFCLGCCASICPHCAPSHRHHPLLQVRRYV 62
Query: 62 YHDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQNRQFKGSGNICTSCDRSLQEPYF 121
Y+DVVRL+DL+KLIDCS VQ YTINS+KV+FLK RPQ+R FKGSGNIC +CDR LQEP+
Sbjct: 63 YNDVVRLDDLDKLIDCSFVQPYTINSAKVIFLKPRPQSRPFKGSGNICLTCDRILQEPFH 122
Query: 122 HCSLDCKVEYILRQKKDLSAYL 143
C L CKV++++ Q DLS L
Sbjct: 123 FCCLSCKVDHVMMQGGDLSNIL 144
>Os02g0172800 Similar to Zinc-binding protein
Length = 241
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/139 (64%), Positives = 107/139 (76%), Gaps = 1/139 (0%)
Query: 3 KPAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCTSICPHCVAAHRVHRLLQVRRYVY 62
+P W+ L + FF+ C HE KKNEKNI CL CCTSICPHC +HR H LLQVRRYVY
Sbjct: 4 RPGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCTSICPHCAPSHRHHPLLQVRRYVY 63
Query: 63 HDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQNRQFKGSGNICTSCDRSLQEPYFH 122
+DVVRL DLEKLI+CS VQ YTINS+KV+FLK RPQ+R FKGSGN+C +CDR LQEP+
Sbjct: 64 NDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSRPFKGSGNVCLTCDRILQEPFHF 123
Query: 123 CSLDCKVEYIL-RQKKDLS 140
CSL CKV++++ DLS
Sbjct: 124 CSLSCKVDHVMVHGGGDLS 142
>Os02g0692700 Protein of unknown function DUF597 family protein
Length = 287
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
Query: 4 PAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCT-SICPHCVAAHRVHRLLQVRRYVY 62
P WL+ L + FF+ C H A K+E N+ CLDC ++C C++ HR H +Q+RR Y
Sbjct: 63 PPWLKPLLSTSFFVQCRIHADAHKSECNMYCLDCMNGALCSLCLSHHRDHHAIQIRRSSY 122
Query: 63 HDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQNRQFKGSGNICTSCDRSLQEPYFH 122
HDV+R+ +++K++D + VQ+Y INS++VVFL +RPQ R KG N C C+RSL + +
Sbjct: 123 HDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRF 182
Query: 123 CSLDCKV 129
CSL CK+
Sbjct: 183 CSLGCKI 189
>Os04g0591100 Protein of unknown function DUF597 family protein
Length = 249
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 120/234 (51%), Gaps = 31/234 (13%)
Query: 4 PAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCT-SICPHCVAAHRVHRLLQVRRYVY 62
P WL+ L FF C H + K+E N+ CLDC ++C C++ HR H +Q+RR Y
Sbjct: 34 PPWLKPLLATSFFGQCKLHADSHKSECNMYCLDCMNGALCSQCLSYHRDHHAIQIRRSSY 93
Query: 63 HDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQNRQFKGSGNICTSCDRSLQEPYFH 122
HDV+R+ +++K++D + VQ+Y INS++VVFL +RPQ R KG N C C+RSL + +
Sbjct: 94 HDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDTFRF 153
Query: 123 CSLDCKV-----EYILRQKKDLSAYLRPCKTLQLGPDFFIPHDADDETTHSTLVDVDEPM 177
CSL CK+ +Y R K+ ++ K L G +P D+DD +T ++ +
Sbjct: 154 CSLGCKIVGTSGDYRGR-KRHAGGGIKKTKKLHKGAA-AVPSDSDDSSTTTSGGSDKSSV 211
Query: 178 GSSDSENLSAPCPNFVRKKRSGPYICARSANRVSDDDMATNMSRRKGVPHRSPL 231
S + + N R + RRKGVPHRSP
Sbjct: 212 VQSFTPSTPPATANSYRTGK-----------------------RRKGVPHRSPF 242
>Os08g0560300 Protein of unknown function DUF597 family protein
Length = 200
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 11/137 (8%)
Query: 4 PAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCTSICPHCVAA----HRVHRLLQVRR 59
P WLE L + +FF+AC H + +NE N+ CLDC + P C H+ HR++Q+RR
Sbjct: 12 PEWLETLLSTRFFLACGAHPASPRNECNMFCLDCPSPSPPFCYYCRSHRHQSHRVIQIRR 71
Query: 60 YVYHDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQNR-------QFKGSGNICTSC 112
YHDVVR+ ++E ++D S VQ+Y INS+KV+FL +RPQ R + S C C
Sbjct: 72 SSYHDVVRVTEVEDVLDISGVQTYVINSAKVLFLNERPQPRGAGAAAGKAAASPYNCQIC 131
Query: 113 DRSLQEPYFHCSLDCKV 129
R+L +P+ CSL CK+
Sbjct: 132 ARALLDPFRFCSLGCKL 148
>Os01g0517800 Protein of unknown function DUF597 family protein
Length = 236
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 127/265 (47%), Gaps = 69/265 (26%)
Query: 2 WKPAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCT---SICPHCVAAHRV-HRLLQV 57
+ P WLE L + +FF C+ H ++ +NE N+ C+DC + C +C + H HR++Q+
Sbjct: 5 FVPPWLELLLSTQFFNTCTSHHNSPRNECNLFCIDCQAPEAAFCYYCRSCHHSSHRVIQI 64
Query: 58 RRYVYHDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQNRQFKGSGNI--------- 108
RR YHDVV++ +LE ++D S VQ+Y INS++VVFL +RP Q +G G +
Sbjct: 65 RRSSYHDVVKVSELEDILDISDVQTYVINSARVVFLNERP---QLRGCGVLAIKSSPSSL 121
Query: 109 ----CTSCDRSLQEPYFHCSLDCKVEYILRQKKDLSAYLRPCKTLQLGPDFFIPHDADDE 164
C +C R L + + CSL C + I K D+ + A+D
Sbjct: 122 SSYNCETCSRVLLDAFRFCSLGCNLIGI---KNDVETVV-----------------ANDG 161
Query: 165 TTHSTL-VDVDEPMGSSDSENLSAPCPNFVRKKRSGPYICARS---ANRVSDDDMATNMS 220
H+ +++D G++++ G IC + AN ++D++ ++ S
Sbjct: 162 IAHNDKDIEIDGSNGTANTNGTG-----------KGIEICGNNGTIANTGNEDEICSDAS 210
Query: 221 --------------RRKGVPHRSPL 231
RRKG+P R+P
Sbjct: 211 KNKEILSSTRVVRHRRKGIPRRAPF 235
>Os01g0518000 Protein of unknown function DUF597 family protein
Length = 217
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 49/243 (20%)
Query: 4 PAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCT---SICPHC-VAAHRVHRLLQVRR 59
P+W+E L + +FF CS H + +NE N C+DC T S C +C ++ H H ++Q+RR
Sbjct: 8 PSWVELLLSTQFFTTCSSHLISPRNECNFFCIDCQTPQASFCYYCRLSHHSSHHVIQIRR 67
Query: 60 YVYHDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQ-------NRQFKGSGNI-CTS 111
YHDVV++ +LE ++D S VQ+Y INSS+VV+L +RPQ N + S C
Sbjct: 68 SSYHDVVKVSELEDILDISDVQTYVINSSRVVYLTERPQLRSCGVSNTKLSSSQTYKCEI 127
Query: 112 CDRSLQEPYFHCSLDCKVEYILR-QKKDLS--AYLRPCKTLQLGPDFFIPHDADDETTHS 168
C R+L + + CSL C I R +K+++ +++G + + T
Sbjct: 128 CSRTLLDDFRFCSLGCNFAAIKRDNEKNVAQNGIASNANEVKIGTN-------NGSTNAG 180
Query: 169 TLVDVDEPMGSSDSENLSAPCPNFVRKKRSGPYICARSANRVSDDDMATNMSRRKGVPHR 228
+ ++ SSD+ N P+ R R RRKG+P R
Sbjct: 181 SANEI-----SSDANNYRNEIPSSTRVIR----------------------HRRKGIPRR 213
Query: 229 SPL 231
+P
Sbjct: 214 APF 216
>Os02g0661400
Length = 226
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 18/158 (11%)
Query: 4 PAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCTSICPHCVAAHRVHRLLQVRRYVYH 63
P WL L +++FF +C H +KN+KN C+DC ++C HC+ H +LQ+ +Y
Sbjct: 10 PQWLRGLLSEEFFDSCGAHPGERKNDKNHFCVDCAAALCRHCLPHDASHGVLQIWKYASC 69
Query: 64 DVVRLEDLEKLIDC-----------------SSVQSYTINSSKVVFLKKRPQNRQFKGSG 106
VVR++DL KL DC S VQS+T++ +VVFL +R ++
Sbjct: 70 FVVRVDDL-KLFDCNGIQTYCTDHESYSYMVSGVQSHTLSDHEVVFLNERTARKRSASVE 128
Query: 107 NICTSCDRSLQEPYFHCSLDCKVEYILRQKKDLSAYLR 144
N C +C R L + +CSL CKV+++ + L LR
Sbjct: 129 NPCAACARPLPSGHDYCSLFCKVKHLGESDQGLRRALR 166
>Os10g0574700 Protein of unknown function DUF597 family protein
Length = 254
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 77/136 (56%), Gaps = 10/136 (7%)
Query: 4 PAWLEALNTQKFFIACSFHEHA-KKNEKNICCLDCCTSICPHCVAA--------HRVHRL 54
P WL L + FF C H + + E N+ CLDC A HR H
Sbjct: 40 PRWLSPLLSASFFSQCKVHADSHRSGECNMFCLDCAADADAAAAALCSLCLAHNHRDHHT 99
Query: 55 LQVRRYVYHDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQNRQFKGS-GNICTSCD 113
+Q+RR YHDV+R+ D+++ +D VQ+Y INS++VVFL +RPQ++ KG+ NIC C
Sbjct: 100 IQIRRSSYHDVIRVSDIQRFMDIGGVQTYVINSARVVFLNERPQHKAGKGAVANICEVCS 159
Query: 114 RSLQEPYFHCSLDCKV 129
RSL + + CSL CKV
Sbjct: 160 RSLLDNFRFCSLGCKV 175
>Os09g0116100 Protein of unknown function DUF597 family protein
Length = 247
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 7/132 (5%)
Query: 4 PAWLEALNTQKFFIACSFHE---HAKKNEKNICCLDCCTSICPHCVAAHRVHRLLQVRRY 60
P WL L F+ C HE +A + E++I C++C +ICPHC H+LL+VRRY
Sbjct: 61 PLWLNVLLRTIFWRKCDVHEQLENAHRAEESIFCINCLKTICPHCTHDEPSHQLLKVRRY 120
Query: 61 VYHDVVRLEDLEKL-IDCSSVQSYTINSSKVVFLK--KRPQNRQFKGSGNICTSCDRSLQ 117
++ VVR++D++ ID S +Q++ N KVV L+ KR ++ + K CTSC L
Sbjct: 121 IFRSVVRVKDMQNFGIDMSYIQTFKCNGHKVVHLRPIKRSEHHRPKAGTPHCTSCHCWLH 180
Query: 118 E-PYFHCSLDCK 128
P CSL CK
Sbjct: 181 NAPSLTCSLSCK 192
>Os02g0193400
Length = 297
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 22/117 (18%)
Query: 3 KPAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCTSI----------CPHCVAA---- 48
+PAWL +L +FF AC+ H +NE N CL C + C CV A
Sbjct: 9 EPAWLRSLLGARFFEACAAHRGMSRNECNQYCLTCAAAADDAGGAAAVGCQWCVVAAHGG 68
Query: 49 -------HRVHRLLQVRRYVYHDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQ 98
HR HR++QVRR YH+VVR+ +LE+ +D + VQ+Y IN +VVFL +RPQ
Sbjct: 69 GAGRDRGHR-HRVVQVRRSSYHNVVRVSELERTLDLTRVQTYVINRDRVVFLNERPQ 124
>Os09g0118900
Length = 244
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 4 PAWLEALNTQKFFIACSFH---EHAKKNEKNICCLDCCTSICPHCVAAHRVHRLLQVRRY 60
P WL L F+ C H E+ + E++I C +C +ICPHC H+LL+VRRY
Sbjct: 68 PLWLNVLLRTAFWRKCDVHDQLENTHRAEESIFCTNCLKTICPHCKHDQPSHQLLKVRRY 127
Query: 61 VYHDVVRLEDLEKL-IDCSSVQSYTINSSKVVFLK--KRPQNRQFKGSGNICTSCDRSLQ 117
++ VV ++D++ ID S +Q++ N KVV L+ KR ++ + K CT+C L
Sbjct: 128 IFRSVVHVKDMQNFGIDMSYIQTFKCNGHKVVHLRPMKRSKHHRPKAGTPRCTTCQCWLH 187
Query: 118 E-PYFHCSLDCK 128
P CSL CK
Sbjct: 188 NAPSLTCSLSCK 199
>AK064470
Length = 89
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 6 WLEALNTQKFFIACSFHEHAKKNEKNICCLDCCT-SICPHCVAAHRVHRLLQVRRYVYHD 64
WL+ L FF C H + K+E N+ CLDC ++C C++ HR H +Q+RR YHD
Sbjct: 4 WLKPLLATSFFGQCKLHADSHKSECNMYCLDCMNGALCSQCLSYHRDHHAIQIRRSSYHD 63
Query: 65 VVRLEDLEKLIDCSSVQS 82
V+R+ +++K++D + VQ+
Sbjct: 64 VIRVSEIQKVLDITGVQT 81
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.135 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,543,387
Number of extensions: 355865
Number of successful extensions: 839
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 821
Number of HSP's successfully gapped: 14
Length of query: 232
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 134
Effective length of database: 11,918,829
Effective search space: 1597123086
Effective search space used: 1597123086
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 154 (63.9 bits)