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Os10g0574700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF597 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0266) R2 : 0.326
β1 : 0.906 (0.0972) R2dD : 0.133 R2D : 0.0662
β2 : 0.688 (0.0691) R2dC : 0.147 R2C : 0.109
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.455 (0.0567) R2dN8 : 0.128 R2N8 : 0.0491
σ : 0.499
deviance : 113.62
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_____
C
peak time of C : 18.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
98.21 0.466 10.9 1.11 0.837 -0.762 -0.313 0.392 0.665 19.7 13.38 1239 -- --
97 0.459 10.9 1.09 0.886 -0.74 -0.415 -- 0.649 19.6 16.75 1142 -- --
95.35 0.455 10.9 1.05 1.09 -0.872 -- 0.206 0.601 19.5 15.26 1032 -- --
95.17 0.454 10.9 1.08 1.13 -0.912 -- -- 0.628 19.4 14.22 1021 -- --
129.16 0.529 10.9 0.927 -- -0.507 -- 0.231 0.544 -- 46.93 1507 -- --
113.61 0.5 10.9 0.907 0.688 -- 0.0501 -- 0.455 18.7 -- -- -- --
113.62 0.499 10.9 0.906 0.688 -- -- -- 0.455 18.7 -- -- -- --
129.17 0.529 10.9 0.944 -- -0.513 -- -- 0.519 -- 47.42 1274 -- --
124.36 0.519 10.9 -- 0.894 -0.628 -- -- 0.507 19.3 29.89 1041 -- --
138.29 0.549 10.9 0.89 -- -- -- -- 0.441 -- -- -- -- --
135.27 0.544 10.9 -- 0.677 -- -- -- 0.354 18.8 -- -- -- --
144.97 0.561 10.9 -- -- -0.607 -- -- 0.346 -- 70 7194 -- --
159.2 0.589 10.9 -- -- -- -- -- 0.342 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.98 radiation 10.0 720 < th dose independent rect. 13 4
4 91.99 humidity 50.0 10 > th dose dependent rect. 6 14
9 93.12 wind 5.0 10 < th dose independent rect. 20 10
11 93.37 radiation 10.0 720 < th dose independent rect. 12 13
12 93.37 radiation 20.0 720 < th dose dependent rect. 12 5
17 93.75 radiation 20.0 720 < th dose dependent rect. 12 13
23 93.81 radiation 10.0 720 < th dose independent rect. 16 1
43 94.37 radiation 40.0 720 < th dose dependent rect. 15 2
63 94.87 humidity 50.0 270 > th dose independent rect. 5 13
108 95.52 humidity 50.0 720 > th dose dependent rect. 15 2
112 95.61 wind 9.0 10 < th dose dependent rect. 20 10
133 95.86 humidity 70.0 30 > th dose independent rect. 6 14
142 96.01 wind 5.0 90 < th dose independent rect. 13 16
147 96.07 humidity 50.0 720 > th dose dependent rect. 13 5
173 96.43 humidity 60.0 720 > th dose independent rect. 15 2
182 96.53 wind 7.0 270 < th dose independent rect. 18 11
185 96.58 temperature 30.0 270 < th dose independent rect. 15 17
196 96.66 humidity 60.0 720 > th dose independent rect. 15 9
202 96.72 temperature 30.0 270 < th dose independent rect. 14 19
205 96.73 wind 7.0 720 < th dose independent rect. 10 19
226 96.91 wind 7.0 90 < th dose independent sin 12 NA
228 96.94 humidity 60.0 270 > th dose independent rect. 14 19
234 96.96 humidity 60.0 720 > th dose independent rect. 14 4
245 97.07 humidity 60.0 270 > th dose independent rect. 15 17
252 97.12 humidity 50.0 720 > th dose dependent rect. 12 13
278 97.29 precipitation 0.1 30 < th dose independent rect. 20 10
279 97.29 precipitation 0.1 30 < th dose dependent rect. 20 10
295 97.38 radiation 20.0 720 < th dose dependent sin 19 NA
325 97.58 wind 5.0 90 < th dose independent rect. 11 19
327 97.59 radiation 10.0 720 < th dose independent sin 18 NA
367 97.76 temperature 30.0 720 < th dose independent rect. 13 13
381 97.86 wind 7.0 720 < th dose independent rect. 17 5
401 97.96 humidity 50.0 270 > th dose dependent rect. 14 19
410 98.02 radiation 30.0 30 < th dose dependent rect. 20 10
412 98.03 temperature 15.0 90 > th dose independent rect. 6 14
416 98.06 temperature 30.0 720 < th dose independent rect. 14 11
421 98.07 radiation 20.0 720 < th dose independent rect. 12 20
425 98.10 humidity 60.0 720 > th dose independent rect. 6 18
428 98.13 temperature 20.0 270 > th dose independent rect. 5 4
429 98.14 temperature 10.0 30 > th dose independent rect. 20 10
430 98.14 temperature 10.0 1440 > th dose independent rect. 21 10
433 98.14 temperature 30.0 30 < th dose independent rect. 20 10
434 98.14 temperature 30.0 1440 < th dose independent rect. 21 10
438 98.14 humidity 50.0 30 > th dose independent rect. 20 10
441 98.14 humidity 50.0 1440 > th dose independent rect. 21 10
446 98.14 atmosphere 995.0 30 > th dose independent rect. 20 10
447 98.14 atmosphere 995.0 1440 > th dose independent rect. 21 10
448 98.14 radiation 20.0 30 < th dose independent rect. 20 10
451 98.14 radiation 40.0 1440 < th dose independent rect. 21 10
457 98.14 temperature 10.0 1440 > th dose independent rect. 7 14
460 98.14 atmosphere 1015.0 30 < th dose independent rect. 6 14
501 98.24 humidity 50.0 720 > th dose dependent rect. 8 16
518 98.29 wind 7.0 720 > th dose independent rect. 15 3
527 98.31 humidity 50.0 10 > th dose dependent sin 18 NA
528 98.31 wind 5.0 270 > th dose dependent rect. 15 13
556 98.40 temperature 30.0 720 < th dose independent rect. 13 5
557 98.40 wind 7.0 720 < th dose independent rect. 11 10
560 98.40 temperature 15.0 270 > th dose dependent rect. 5 3
596 98.49 radiation 20.0 10 < th dose dependent rect. 6 22
598 98.50 wind 5.0 90 > th dose dependent sin 12 NA
600 98.50 radiation 10.0 4320 < th dose dependent rect. 21 8
605 98.52 humidity 50.0 720 > th dose dependent sin 20 NA
615 98.56 wind 9.0 30 < th dose independent rect. 6 14
639 98.61 wind 7.0 720 < th dose independent rect. 9 13
652 98.64 precipitation 0.1 90 < th dose independent rect. 11 18
653 98.64 precipitation 0.1 90 < th dose dependent rect. 11 18
681 98.76 wind 7.0 10 < th dose independent sin 11 NA
689 98.78 wind 7.0 720 < th dose independent rect. 15 14
694 98.79 wind 7.0 720 < th dose independent rect. 13 16
698 98.80 temperature 30.0 720 < th dose independent rect. 15 2
713 98.82 humidity 50.0 90 > th dose dependent rect. 5 22
722 98.84 radiation 20.0 14400 < th dose independent rect. 21 9
749 98.91 atmosphere 1010.0 30 < th dose independent rect. 20 10
788 99.00 wind 7.0 720 > th dose independent rect. 14 8
789 99.00 radiation 20.0 720 < th dose independent rect. 6 18
826 99.08 wind 5.0 270 > th dose independent rect. 15 11
830 99.08 wind 7.0 720 > th dose dependent rect. 15 2
846 99.12 atmosphere 995.0 30 > th dose independent rect. 6 14
868 99.16 radiation 20.0 90 < th dose dependent rect. 5 22
890 99.21 wind 7.0 720 > th dose dependent rect. 14 4
900 99.23 wind 7.0 90 < th dose dependent rect. 13 16
904 99.24 precipitation 0.1 10 < th dose independent rect. 6 14
908 99.24 precipitation 0.1 10 < th dose dependent rect. 6 14
913 99.25 wind 9.0 270 < th dose dependent rect. 18 11
923 99.27 temperature 15.0 270 > th dose dependent rect. 4 5
944 99.32 wind 7.0 720 < th dose independent rect. 17 21
945 99.32 wind 5.0 90 > th dose dependent rect. 17 11
953 99.33 precipitation 0.1 270 < th dose independent rect. 9 20
956 99.33 precipitation 0.1 270 < th dose dependent rect. 9 20