Os02g0183000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF597 family protein.
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Os02g0183000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF597 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 215.15 | 0.689 | 2.07 | 4.69 | 0.0637 | -68.3 | -0.822 | 416 | 0.0748 | 5.75 | 994.6 | 688 | -- | -- |
| 227.34 | 0.708 | 2.82 | 0.188 | 0.0817 | -0.142 | -0.756 | -- | 0.068 | 5.79 | 995.7 | 366 | -- | -- |
| 216.78 | 0.686 | 2.07 | 4.68 | 0.061 | -68.2 | -- | 416 | 0.0786 | 4.67 | 994.6 | 685 | -- | -- |
| 228.53 | 0.704 | 2.82 | 0.181 | 0.0872 | -0.198 | -- | -- | 0.0701 | 3.81 | 995.1 | 446 | -- | -- |
| 216.98 | 0.686 | 2.07 | 4.68 | -- | -68.2 | -- | 416 | 0.0798 | -- | 994.6 | 685 | -- | -- |
| 227.38 | 0.707 | 2.82 | 0.186 | 0.0848 | -- | -0.746 | -- | 0.0688 | 5.78 | -- | -- | -- | -- |
| 228.66 | 0.708 | 2.82 | 0.18 | 0.0885 | -- | -- | -- | 0.0713 | 4.11 | -- | -- | -- | -- |
| 228.93 | 0.705 | 2.82 | 0.187 | -- | -0.225 | -- | -- | 0.0705 | -- | 995.1 | 446 | -- | -- |
| 229.42 | 0.705 | 2.83 | -- | 0.0874 | -0.172 | -- | -- | 0.0513 | 3.67 | 995.1 | 446 | -- | -- |
| 229.09 | 0.707 | 2.82 | 0.183 | -- | -- | -- | -- | 0.0737 | -- | -- | -- | -- | -- |
| 229.51 | 0.709 | 2.83 | -- | 0.092 | -- | -- | -- | 0.0513 | 4.07 | -- | -- | -- | -- |
| 229.86 | 0.706 | 2.83 | -- | -- | -0.194 | -- | -- | 0.0514 | -- | 995.1 | 446 | -- | -- |
| 229.97 | 0.708 | 2.83 | -- | -- | -- | -- | -- | 0.0533 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 207.80 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 3 | 209.43 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 4 | 211.28 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 7 | 213.56 | wind | 7.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 12 | 214.81 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 1 |
| 15 | 214.88 | wind | 9.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 19 | 214.90 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 27 | 214.90 | wind | 9.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 42 | 215.11 | atmosphere | 995.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 83 | 215.11 | atmosphere | 995.0 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 128 | 215.19 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 24 | 2 |
| 129 | 215.19 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 137 | 215.29 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 164 | 215.57 | humidity | 90.0 | 720 | > th | dose independent | rect. | 14 | 2 |
| 165 | 215.61 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 14 | 1 |
| 167 | 215.65 | radiation | 10.0 | 720 | < th | dose independent | rect. | 12 | 1 |
| 170 | 215.74 | atmosphere | 995.0 | 720 | > th | dose independent | sin | 6 | NA |
| 172 | 215.88 | atmosphere | 995.0 | 720 | < th | dose independent | sin | 6 | NA |
| 183 | 216.46 | humidity | 90.0 | 720 | > th | dose independent | rect. | 12 | 4 |
| 186 | 216.48 | atmosphere | 995.0 | 720 | < th | dose dependent | sin | 7 | NA |
| 203 | 216.89 | atmosphere | 995.0 | 720 | > th | dose independent | sin | 4 | NA |
| 210 | 217.16 | temperature | 15.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 215 | 217.27 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 12 | 3 |
| 249 | 217.40 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 279 | 218.03 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 284 | 218.06 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 9 | 6 |
| 297 | 218.19 | radiation | 10.0 | 720 | > th | dose independent | rect. | 11 | 4 |
| 351 | 218.67 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 355 | 218.72 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 383 | 218.88 | atmosphere | 995.0 | 720 | > th | dose independent | no | NA | NA |
| 390 | 218.92 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 391 | 218.92 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 392 | 218.93 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 394 | 218.94 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 10 | 9 |
| 400 | 218.98 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 403 | 219.01 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 404 | 219.02 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 407 | 219.04 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 429 | 219.18 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 437 | 219.20 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 438 | 219.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 441 | 219.20 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 445 | 219.20 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 454 | 219.20 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 455 | 219.20 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 475 | 219.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 492 | 219.24 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 493 | 219.24 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 510 | 219.27 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 513 | 219.27 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 517 | 219.27 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 519 | 219.27 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 524 | 219.27 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 527 | 219.27 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 532 | 219.27 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 534 | 219.28 | atmosphere | 995.0 | 720 | < th | dose independent | no | NA | NA |
| 535 | 219.28 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 15 | 1 |
| 726 | 219.28 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 728 | 219.32 | humidity | 90.0 | 10 | > th | dose independent | rect. | 23 | 4 |
| 731 | 219.32 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 734 | 219.34 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 13 | 6 |
| 767 | 219.40 | humidity | 90.0 | 720 | < th | dose independent | rect. | 10 | 5 |
| 768 | 219.41 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 769 | 219.42 | humidity | 90.0 | 720 | < th | dose independent | rect. | 10 | 7 |
| 784 | 219.55 | atmosphere | 995.0 | 720 | < th | dose dependent | no | NA | NA |
| 975 | 219.57 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 998 | 219.68 | wind | 7.0 | 270 | > th | dose dependent | rect. | 12 | 1 |