BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0175400 Os02g0175400|AK067063
(621 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0175400 Similar to Vacuolar H(+)-ATPase subunit A (Fra... 1281 0.0
Os06g0662000 Similar to Vacuolar H+-ATPase subunit A (Fragm... 1204 0.0
AK108995 125 1e-28
Os01g0685800 Similar to ATP synthase beta chain, mitochondr... 122 1e-27
Os05g0553000 ATP synthase beta chain, mitochondrial precurs... 121 2e-27
Os10g0357600 116 5e-26
Os06g0598600 113 5e-25
Os05g0427700 110 5e-24
Os12g0207500 Similar to ATP synthase beta chain (EC 3.6.3.14) 107 2e-23
Os06g0568200 Vacuolar ATPase B subunit 98 2e-20
Os01g0711000 Similar to Vacuolar ATP synthase subunit B iso... 97 3e-20
Os03g0768800 92 1e-18
Os01g0791150 ATPase, F1 complex, delta/epsilon subunit fami... 88 2e-17
Os10g0355200 84 3e-16
Os10g0527000 83 5e-16
Os04g0235700 83 5e-16
Os09g0263700 69 1e-11
AK108859 69 1e-11
AK108751 67 5e-11
>Os02g0175400 Similar to Vacuolar H(+)-ATPase subunit A (Fragment)
Length = 621
Score = 1281 bits (3314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/621 (100%), Positives = 621/621 (100%)
Query: 1 MAFGDRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEG 60
MAFGDRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEG
Sbjct: 1 MAFGDRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEG 60
Query: 61 DSATIQVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIP 120
DSATIQVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIP
Sbjct: 61 DSATIQVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIP 120
Query: 121 RGVSVPALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALPPGAMGKISYIA 180
RGVSVPALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALPPGAMGKISYIA
Sbjct: 121 RGVSVPALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALPPGAMGKISYIA 180
Query: 181 PAGQYSLQDTVLELEFQGIKKEFTMLQTWPVRSPRPVMEKLAADTPLLTGQRVLDALFPS 240
PAGQYSLQDTVLELEFQGIKKEFTMLQTWPVRSPRPVMEKLAADTPLLTGQRVLDALFPS
Sbjct: 181 PAGQYSLQDTVLELEFQGIKKEFTMLQTWPVRSPRPVMEKLAADTPLLTGQRVLDALFPS 240
Query: 241 VLGGTCAIPGAFGCGKTVISQALSKYSNSQAVVYVGCGERGNEMAEVLMDFPQLTMTTED 300
VLGGTCAIPGAFGCGKTVISQALSKYSNSQAVVYVGCGERGNEMAEVLMDFPQLTMTTED
Sbjct: 241 VLGGTCAIPGAFGCGKTVISQALSKYSNSQAVVYVGCGERGNEMAEVLMDFPQLTMTTED 300
Query: 301 GREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYYRDMGYNVSMMADSTSRWAEALR 360
GREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYYRDMGYNVSMMADSTSRWAEALR
Sbjct: 301 GREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYYRDMGYNVSMMADSTSRWAEALR 360
Query: 361 EISGRLAEMPADSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSD 420
EISGRLAEMPADSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSD
Sbjct: 361 EISGRLAEMPADSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSD 420
Query: 421 PVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALEPHYEREDPDFIDIRTKA 480
PVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALEPHYEREDPDFIDIRTKA
Sbjct: 421 PVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALEPHYEREDPDFIDIRTKA 480
Query: 481 REVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKYCPFYKSVW 540
REVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKYCPFYKSVW
Sbjct: 481 REVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKYCPFYKSVW 540
Query: 541 MMRNIIHFNTLATQAVERAAGADGQKITYSVIKHRMGDLFYRLVSQKFEDPAEGKEVLIA 600
MMRNIIHFNTLATQAVERAAGADGQKITYSVIKHRMGDLFYRLVSQKFEDPAEGKEVLIA
Sbjct: 541 MMRNIIHFNTLATQAVERAAGADGQKITYSVIKHRMGDLFYRLVSQKFEDPAEGKEVLIA 600
Query: 601 KFQKLYDDLTAGFRNLEDEAR 621
KFQKLYDDLTAGFRNLEDEAR
Sbjct: 601 KFQKLYDDLTAGFRNLEDEAR 621
>Os06g0662000 Similar to Vacuolar H+-ATPase subunit A (Fragment)
Length = 620
Score = 1204 bits (3114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/617 (94%), Positives = 598/617 (96%)
Query: 5 DRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEGDSAT 64
DR+TTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVG+DNLIGEIIRLEGDSAT
Sbjct: 4 DRVTTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGNDNLIGEIIRLEGDSAT 63
Query: 65 IQVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVS 124
IQVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVS
Sbjct: 64 IQVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVS 123
Query: 125 VPALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALPPGAMGKISYIAPAGQ 184
VPALDKD LW F+P+KLGVGD ITGGDLYA V ENTLM+H VALPPG+MGKISYIAPAGQ
Sbjct: 124 VPALDKDQLWDFEPKKLGVGDAITGGDLYATVFENTLMKHHVALPPGSMGKISYIAPAGQ 183
Query: 185 YSLQDTVLELEFQGIKKEFTMLQTWPVRSPRPVMEKLAADTPLLTGQRVLDALFPSVLGG 244
YSLQDTVLELEFQGIKK+FTMLQTWPVRSPRPV KLAADTPLLTGQRVLDALFPSVLGG
Sbjct: 184 YSLQDTVLELEFQGIKKQFTMLQTWPVRSPRPVSSKLAADTPLLTGQRVLDALFPSVLGG 243
Query: 245 TCAIPGAFGCGKTVISQALSKYSNSQAVVYVGCGERGNEMAEVLMDFPQLTMTTEDGREE 304
TCAIPGAFGCGKTVISQALSKYSNS+AVVYVGCGERGNEMAEVLMDFPQLTMT DGREE
Sbjct: 244 TCAIPGAFGCGKTVISQALSKYSNSEAVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREE 303
Query: 305 SVMKRTTLVANTSNMPVAAREASIYTGITIAEYYRDMGYNVSMMADSTSRWAEALREISG 364
SVMKRTTLVANTSNMPVAAREASIYTGITIAEY+RDMGYNVSMMADSTSRWAEALREISG
Sbjct: 304 SVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISG 363
Query: 365 RLAEMPADSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTS 424
RLAEMPADSGYPAYLAARLASFYERAGKV+CLGSP R GSVTIVGAVSPPGGDFSDPVTS
Sbjct: 364 RLAEMPADSGYPAYLAARLASFYERAGKVKCLGSPDRTGSVTIVGAVSPPGGDFSDPVTS 423
Query: 425 ATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALEPHYEREDPDFIDIRTKAREVL 484
ATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALE YE+ D DFIDIRTKAREVL
Sbjct: 424 ATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALESFYEKFDQDFIDIRTKAREVL 483
Query: 485 QREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKYCPFYKSVWMMRN 544
QREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDK+CPFYKSVWMMRN
Sbjct: 484 QREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRN 543
Query: 545 IIHFNTLATQAVERAAGADGQKITYSVIKHRMGDLFYRLVSQKFEDPAEGKEVLIAKFQK 604
IIHFNTLA QAVERAA ADGQKITYSVIKHRMGDLFYRLVSQKFEDPAEG++VL+AKFQK
Sbjct: 544 IIHFNTLANQAVERAANADGQKITYSVIKHRMGDLFYRLVSQKFEDPAEGEDVLVAKFQK 603
Query: 605 LYDDLTAGFRNLEDEAR 621
LYDDLT GFRNLEDEAR
Sbjct: 604 LYDDLTTGFRNLEDEAR 620
>AK108995
Length = 516
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 154/314 (49%), Gaps = 22/314 (7%)
Query: 214 PRPVMEKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSQ 270
P E+ + L+TG +V+D L P GG + G G GKTV Q L ++
Sbjct: 157 PPEFTEQSTSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGG 216
Query: 271 AVVYVGCGERGNEMAEVLMDFPQLTMTTEDGREESVMKRTTLVANTSNMPVAAREASIYT 330
V+ G GER E ++ + + ++ +G + LV N P AR T
Sbjct: 217 FSVFTGVGERTREGNDLYHEMQETSVIQLEGE-----SKVALVFGQMNEPPGARARVALT 271
Query: 331 GITIAEYYRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYER 389
G+T+AEY+RD G +V + D+ R+ +A E+S L +P+ GY LA + ER
Sbjct: 272 GLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGVMQER 331
Query: 390 AGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSV 449
+ GS+T V AV P D +DP + T + + L + +++ +P+V
Sbjct: 332 I-------TTTSKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAV 384
Query: 450 NWLISYSKYSKALEPHYEREDPDFIDIRTKAREVLQREDDLNEIVQLVGKDALAESDKIT 509
+ L S S+ L+P +D D TK +++LQ L +I+ ++G D L+E+DK+T
Sbjct: 385 DPLDSKSRI---LDPRIIGQD--HYDTATKVQQILQEYKSLQDIIAILGMDELSEADKLT 439
Query: 510 LETAKLLREDYLAQ 523
+E A+ ++ +L+Q
Sbjct: 440 VERARKIQR-FLSQ 452
>Os01g0685800 Similar to ATP synthase beta chain, mitochondrial precursor (EC
3.6.3.14)
Length = 557
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 178/379 (46%), Gaps = 32/379 (8%)
Query: 200 KKEFTMLQTWPVRSPRPV-MEKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 258
K + T P+ P +E+ L+TG +V+D L P GG + G G GKTV
Sbjct: 181 KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTV 240
Query: 259 -ISQALSKYSNSQA--VVYVGCGER---GNEMAEVLMDFPQLTMTTEDGREESVMKRTTL 312
I + ++ + + V+ G GER GN++ +++ + + D + ES + L
Sbjct: 241 LIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLG--DKQSES---KCAL 295
Query: 313 VANTSNMPVAAREASIYTGITIAEYYRDM-GYNVSMMADSTSRWAEALREISGRLAEMPA 371
V N P AR TG+T+AE++RD G +V + D+ R+ +A E+S L +P+
Sbjct: 296 VYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPS 355
Query: 372 DSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQ 431
GY LA L ER + + GS+T V A+ P D +DP + T + +
Sbjct: 356 AVGYQPTLATDLGGLQERI-------TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD 408
Query: 432 VFWGLDKKLAQRKHFPSVNWLISYSKYSKALEPHYEREDPDFIDIRTKAREVLQREDDLN 491
L +++++ +P+V+ L S S+ L PH ED + ++VLQ +L
Sbjct: 409 ATTVLSRQISELGIYPAVDPLDSTSRM---LSPHVLGED--HYNTARGVQKVLQNYKNLQ 463
Query: 492 EIVQLVGKDALAESDKITLETA----KLLREDYLAQNAFTPY-DKYCPFYKSVWMMRNII 546
+I+ ++G D L+E DK+T+ A + L + + FT KY +SV + ++
Sbjct: 464 DIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVELKESVQSFQGVL 523
Query: 547 --HFNTLATQAVERAAGAD 563
++ L Q+ G D
Sbjct: 524 DGKYDDLPEQSFYMVGGID 542
>Os05g0553000 ATP synthase beta chain, mitochondrial precursor (EC 3.6.3.14)
Length = 552
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 171/360 (47%), Gaps = 30/360 (8%)
Query: 200 KKEFTMLQTWPVRSPRPV-MEKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 258
K + T P+ P +E+ L+TG +V+D L P GG + G G GKTV
Sbjct: 176 KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTV 235
Query: 259 -ISQALSKYSNSQA--VVYVGCGER---GNEMAEVLMDFPQLTMTTEDGREESVMKRTTL 312
I + ++ + + V+ G GER GN++ +++ + + D + ES + L
Sbjct: 236 LIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLG--DKQSES---KCAL 290
Query: 313 VANTSNMPVAAREASIYTGITIAEYYRDM-GYNVSMMADSTSRWAEALREISGRLAEMPA 371
V N P AR TG+T+AE++RD G +V + D+ R+ +A E+S L +P+
Sbjct: 291 VYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPS 350
Query: 372 DSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQ 431
GY LA L ER + + GS+T V A+ P D +DP + T + +
Sbjct: 351 AVGYQPTLATDLGGLQERI-------TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLD 403
Query: 432 VFWGLDKKLAQRKHFPSVNWLISYSKYSKALEPHYEREDPDFIDIRTKAREVLQREDDLN 491
L +++++ +P+V+ L S S+ L PH ED + ++VLQ +L
Sbjct: 404 ATTVLSRQISELGIYPAVDPLDSTSRM---LSPHVLGED--HYNTARGVQKVLQNYKNLQ 458
Query: 492 EIVQLVGKDALAESDKITLETA----KLLREDYLAQNAFTPY-DKYCPFYKSVWMMRNII 546
+I+ ++G D L+E DK+T+ A + L + + FT KY +SV + ++
Sbjct: 459 DIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVELKESVNSFQGVL 518
>Os10g0357600
Length = 410
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 157/330 (47%), Gaps = 33/330 (10%)
Query: 208 TWPVRSPRPVMEKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY 266
T+P+ P +L + TG +V+D L P GG + G G GKTV+ L
Sbjct: 41 TFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN 100
Query: 267 ---SNSQAVVYVGCGERGNEMAEVLMDFPQLTMTTEDGREESVMKRTTLVANTSNMPVAA 323
++ V+ G GER E ++ M+ + + E EES + LV N P A
Sbjct: 101 IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLEES---KVALVYGQMNEPPGA 157
Query: 324 REASIYTGITIAEYYRDMG-YNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAAR 382
R T +T+AEY+RD+ +V + D+ R+ +A E+S L MP+ GY L+
Sbjct: 158 RMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTE 217
Query: 383 LASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQ 442
+ S ER + + GS+T + AV P D +DP + T + + L + LA
Sbjct: 218 MGSLQERI-------TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAS 270
Query: 443 RKHFPSVNWLISYSKYSKALEP------HYEREDPDFIDIRTKAREVLQREDDLNEIVQL 496
+ +P+V+ L S S L+P HYE + ++ LQR +L +I+ +
Sbjct: 271 KGIYPTVDPLDSTSTM---LQPRIVGNEHYETAQ--------RVKQTLQRYKELQDIIAI 319
Query: 497 VGKDALAESDKITLETAKLLREDYLAQNAF 526
+G D L+E D++T+ A+ + E +L+Q F
Sbjct: 320 LGLDELSEEDRLTVARARKI-ERFLSQPFF 348
>Os06g0598600
Length = 484
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 156/330 (47%), Gaps = 33/330 (10%)
Query: 208 TWPVRSPRPVMEKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY 266
T+P+ P +L + TG +V+D L P GG + G G GKTV+ L
Sbjct: 41 TFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN 100
Query: 267 ---SNSQAVVYVGCGERGNEMAEVLMDFPQLTMTTEDGREESVMKRTTLVANTSNMPVAA 323
++ V+ G GER E ++ M+ + + E EES + LV N P A
Sbjct: 101 IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVFNEKNLEES---KVALVYGQMNEPPGA 157
Query: 324 REASIYTGITIAEYYRDMG-YNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAAR 382
R T +T+AEY+RD+ +V + D+ R+ +A EIS L MP+ GY L+
Sbjct: 158 RMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEISALLGRMPSAVGYQPTLSTE 217
Query: 383 LASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQ 442
+ S ER + + GS+T + AV P D +DP T + + L + LA
Sbjct: 218 MGSLQERI-------TSTKKGSITSIQAVYVPADDLTDPAPPTTFAHLDATTVLSRGLAS 270
Query: 443 RKHFPSVNWLISYSKYSKALEP------HYEREDPDFIDIRTKAREVLQREDDLNEIVQL 496
+ +P+V+ L S S L+P HYE + ++ LQR +L +I+ +
Sbjct: 271 KGIYPAVDPLDSTSTM---LQPRIVGNEHYETVQ--------RVKQTLQRYKELQDIIAI 319
Query: 497 VGKDALAESDKITLETAKLLREDYLAQNAF 526
+G D L+E D++T+ A+ + E +L+Q F
Sbjct: 320 LGLDELSEEDRLTVARARKI-ERFLSQPFF 348
>Os05g0427700
Length = 388
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 33/330 (10%)
Query: 208 TWPVRSPRPVMEKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKT-VISQALSK 265
T+P+ P +L + G +V+D L P GG + G G GKT +I + ++
Sbjct: 41 TFPIHRSAPAFIELDTKLSIFENGIKVVDLLAPYRRGGKIGLFGGAGVGKTGLIMELINN 100
Query: 266 YSNSQAVVYVGCG--ERGNEMAEVLMDFPQLTMTTEDGREESVMKRTTLVANTSNMPVAA 323
+ + V V G ER E ++ M+ + + E EES + LV N P A
Sbjct: 101 IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLEES---KVALVYGQMNEPPGA 157
Query: 324 REASIYTGITIAEYYRDMG-YNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAAR 382
R T +T+AEY+RD+ +V + ++ R+ +A E+S L MP+ GY L+
Sbjct: 158 RMRVGLTALTMAEYFRDVNKQDVLLFINNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTE 217
Query: 383 LASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQ 442
+ S ER + + GS+T + AV P D +DP + T + + L + LA
Sbjct: 218 MGSLQERI-------TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAS 270
Query: 443 RKHFPSVNWLISYSKYSKALEP------HYEREDPDFIDIRTKAREVLQREDDLNEIVQL 496
+ +P+V+ L S S L+P HYE + ++ LQR +L +I+ +
Sbjct: 271 KGIYPAVDPLDSTSTM---LQPRIVGNEHYETAQ--------RVKQTLQRYKELQDIIAI 319
Query: 497 VGKDALAESDKITLETAKLLREDYLAQNAF 526
+G D L+E D++T+ A+ + E +L+Q F
Sbjct: 320 LGLDELSEEDRLTVARARKI-ERFLSQPFF 348
>Os12g0207500 Similar to ATP synthase beta chain (EC 3.6.3.14)
Length = 336
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 32/317 (10%)
Query: 208 TWPVRSPRPVMEKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY 266
T+P+ P +L + TG +V+D L P GG + G G GKTV+ L
Sbjct: 41 TFPIHISAPAFIELDTKLSIFQTGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN 100
Query: 267 ---SNSQAVVYVGCGERGNEMAEVLMDFPQLTMTTEDGREESVMKRTTLVANTSNMPVAA 323
++ V+ G GER E ++ M+ + + E EES + LV N P A
Sbjct: 101 IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLEES---KVALVYGQMNEPPGA 157
Query: 324 REASIYTGITIAEYYRDMG-YNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAAR 382
R T +T+AEY+RD+ +V + D+ R+ +A E+S L MP+ GY L+
Sbjct: 158 RMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSSLLGRMPSAVGYQPTLSTE 217
Query: 383 LASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQ 442
+ S ER + + GS+T + AV D +DP + T + + L + LA
Sbjct: 218 MGSLQERI-------TSTKKGSITSIQAVYVHADDLTDPAPATTFAHLDATTVLSRGLAS 270
Query: 443 RKHFPSVNWLISYSKYSKALEP------HYEREDPDFIDIRTKAREVLQREDDLNEIVQL 496
+ +P+V+ L S S L+P HYE + ++ LQR +L +I+ +
Sbjct: 271 KGIYPAVDPLDSTSTM---LQPRIVGNEHYETAQ--------RVKQTLQRYKELQDIIAI 319
Query: 497 VGKDALAESDKITLETA 513
+G D L+E D++T+ A
Sbjct: 320 LGLDELSEEDRLTVARA 336
>Os06g0568200 Vacuolar ATPase B subunit
Length = 488
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 9/229 (3%)
Query: 300 DGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYYR-DMGYNVSMMADSTSRWAEA 358
D E M+R TL N +N P R + +T AEY + G +V ++ S +A+A
Sbjct: 225 DFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADA 284
Query: 359 LREISGRLAEMPADSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDF 418
LRE+S E+P GYP Y+ LA+ YERAG++ R GS+T + ++ P D
Sbjct: 285 LREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEG-----RSGSITQIPILTMPNDDI 339
Query: 419 SDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSK-ALEPHYEREDPDFIDIR 477
+ P T I + +D++L R+ +P +N L S S+ K A+ R D + +
Sbjct: 340 THPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQ 399
Query: 478 TKAREVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAF 526
A + + D+ + +VG++AL+ D + LE ++ Q A+
Sbjct: 400 LYANYAIGK--DVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAY 446
>Os01g0711000 Similar to Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14)
(V-ATPase B subunit 2) (Vacuolar proton pump B subunit
2)
Length = 488
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 9/229 (3%)
Query: 300 DGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYYR-DMGYNVSMMADSTSRWAEA 358
D E M+R TL N +N P R + +T AEY + G +V ++ S +A+A
Sbjct: 225 DFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADA 284
Query: 359 LREISGRLAEMPADSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDF 418
LRE+S E+P GYP Y+ LA+ YERAG++ R GS+T + ++ P D
Sbjct: 285 LREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEG-----RKGSITQIPILTMPNDDI 339
Query: 419 SDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSK-ALEPHYEREDPDFIDIR 477
+ P T I + +D++L R+ +P +N L S S+ K A+ R D + +
Sbjct: 340 THPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQ 399
Query: 478 TKAREVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAF 526
A + + D+ + +VG++AL+ D + LE ++ Q A+
Sbjct: 400 LYANYAIGK--DVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAY 446
>Os03g0768800
Length = 341
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 29/238 (12%)
Query: 296 MTTEDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYYRDMG-YNVSMMADSTSR 354
+ E EES + LV N P AR T +T+AEY+RD+ +V + D+ R
Sbjct: 6 VINEKNLEES---KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFR 62
Query: 355 WAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPP 414
+ +A E+S L MP+ GY L+ + S ER + + GS+T + AV P
Sbjct: 63 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-------TSTKKGSITSIQAVYVP 115
Query: 415 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALEP------HYER 468
D +DP + T + + L + LA + +P+V+ L S S L+P HYE
Sbjct: 116 ADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTM---LQPRIVGNEHYET 172
Query: 469 EDPDFIDIRTKAREVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAF 526
+ ++ LQR +L +I+ ++G D L+E D++T+ A+ + E +L+Q F
Sbjct: 173 AQ--------RVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKI-ERFLSQPFF 221
>Os01g0791150 ATPase, F1 complex, delta/epsilon subunit family protein
Length = 318
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 109/216 (50%), Gaps = 26/216 (12%)
Query: 318 NMPVAAREASIYTGITIAEYYRDMG-YNVSMMADSTSRWAEALREISGRLAEMPADSGYP 376
N P AR T +T+AEY+RD+ +V + D+ R+ +A E+S L MP+ GY
Sbjct: 2 NEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQ 61
Query: 377 AYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 436
L+ + S E + S K+ GS+T + AV P D +DP + T + + L
Sbjct: 62 PTLSTEMGSLQE------IITSTKK-GSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 114
Query: 437 DKKLAQRKHFPSVNWLISYSKYSKALEP------HYEREDPDFIDIRTKAREVLQREDDL 490
+ LA + +P+V+ L S S L+P HYE + ++ LQR +L
Sbjct: 115 SRGLASKGIYPAVDPLDSTSTM---LQPRIVGNEHYETAQ--------RVKQTLQRYKEL 163
Query: 491 NEIVQLVGKDALAESDKITLETAKLLREDYLAQNAF 526
+I+ ++G D L+E D++T+ A+ + E +L+Q F
Sbjct: 164 QDIIAILGLDELSEEDRLTVARARKI-ERFLSQPFF 198
>Os10g0355200
Length = 507
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 26/270 (9%)
Query: 200 KKEFTMLQTWPVRSPRP-VMEKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 258
+ E ++ + SP P ++ + + PL TG +D++ P G I G GKT
Sbjct: 119 RGEIVASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178
Query: 259 ISQ--ALSKYSNSQAVVYVGCGERGNEMAEVLMDFPQLTMTTEDGREESVMKRTTLVANT 316
++ L++ VYV G+R + +A V+ F EE M+ T +VA
Sbjct: 179 VATDTILNQKGQDVICVYVAIGQRASSVARVVTTF----------HEEGAMEYTIVVAEM 228
Query: 317 SNMPVAAREASIYTGITIAEYYRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 376
++ P + + YTG +AEY+ +++ ++ D S+ A+A R++S L P YP
Sbjct: 229 ADSPATLQYLAPYTGAALAEYFMYREWHILIIYDDLSKQAQAYRQMSLLLRRPPGREAYP 288
Query: 377 A---YLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIV--Q 431
YL +RL ERA K+ L +GS+T + V GD S + + +SI Q
Sbjct: 289 GDVFYLHSRL---LERAAKLNSLLG---EGSMTALPIVETQSGDVSVYIPTNVISITDGQ 342
Query: 432 VFWGLDKKLAQRKHFPSVNWLISYSKYSKA 461
+F D L P++N IS S+ A
Sbjct: 343 IFLSAD--LFNAGIRPAINVGISVSRVGSA 370
>Os10g0527000
Length = 503
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 123/270 (45%), Gaps = 26/270 (9%)
Query: 200 KKEFTMLQTWPVRSPRP-VMEKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 258
+ E ++ + SP P ++ + + PL TG +D++ P G I G GKT
Sbjct: 119 RGEIVASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178
Query: 259 ISQ--ALSKYSNSQAVVYVGCGERGNEMAEVLMDFPQLTMTTEDGREESVMKRTTLVANT 316
++ L++ VYV G+R + +A+V+ F EE M+ T +VA
Sbjct: 179 VATDTILNQKGQDVICVYVAIGQRASSVAQVVTTF----------HEEGAMEYTIVVAEM 228
Query: 317 SNMPVAAREASIYTGITIAEYYRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 376
++ P + + YTG +AEY+ + ++ D S+ A+A R++S L P YP
Sbjct: 229 ADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYP 288
Query: 377 A---YLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIV--Q 431
YL +RL ERA K+ L +GS+T + V GD S + + +SI Q
Sbjct: 289 GDVFYLHSRL---LERAAKLNSLLG---EGSMTALPIVETQSGDVSAYIPTNVISITDGQ 342
Query: 432 VFWGLDKKLAQRKHFPSVNWLISYSKYSKA 461
+F D L P++N IS S+ A
Sbjct: 343 IFLSAD--LFNAGIRPAINVGISVSRVGSA 370
>Os04g0235700
Length = 507
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 123/270 (45%), Gaps = 26/270 (9%)
Query: 200 KKEFTMLQTWPVRSPRP-VMEKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 258
+ E ++ + SP P ++ + + PL TG +D++ P G I G GKT
Sbjct: 119 RGEIVASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178
Query: 259 ISQ--ALSKYSNSQAVVYVGCGERGNEMAEVLMDFPQLTMTTEDGREESVMKRTTLVANT 316
++ L++ VYV G+R + +A+V+ F EE M+ T +VA
Sbjct: 179 VATDTILNQKGQDVICVYVAIGQRASSVAQVVTTF----------HEEGAMEYTIVVAEM 228
Query: 317 SNMPVAAREASIYTGITIAEYYRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 376
++ P + + YTG +AEY+ + ++ D S+ A+A R++S L P YP
Sbjct: 229 ADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYP 288
Query: 377 A---YLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIV--Q 431
YL +RL ERA K+ L +GS+T + V GD S + + +SI Q
Sbjct: 289 GDVFYLHSRL---LERAAKLNSLLG---EGSMTALPIVETQSGDVSAYIPTNVISITDGQ 342
Query: 432 VFWGLDKKLAQRKHFPSVNWLISYSKYSKA 461
+F D L P++N IS S+ A
Sbjct: 343 IFLSAD--LFNAGIRPAINVGISVSRVGSA 370
>Os09g0263700
Length = 492
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 31/267 (11%)
Query: 211 VRSPRPVMEKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVIS--------QA 262
V++P ++E+ + P+ TG + +D+L P G I G GKT I+ Q
Sbjct: 116 VKAP-GIIERKSVHEPMQTGLKAVDSLVPIDRGQRELIIGDRQTGKTAIAIDTILNQKQM 174
Query: 263 LSKYSNSQA---VVYVGCGERGNEMAEVLMDFPQLTMTTEDGREESVMKRTTLVANTSNM 319
S+ +N VYV G++ + +A+++ E + ++ + LVA T++
Sbjct: 175 NSRGTNESETLYCVYVAIGQKRSTVAQLVQILS----------EANALEYSILVAATASD 224
Query: 320 PVAAREASIYTGITIAEYYRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPA-- 377
P + + Y+G + EY+RD G + ++ D S+ A A R++S L P +P
Sbjct: 225 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 284
Query: 378 -YLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 436
YL +RL ERA K GS+T + + G S + + +SI L
Sbjct: 285 FYLHSRL---LERAAK---RSDQTGAGSLTALPVIETQAGGVSAYIPTNVISITDGQICL 338
Query: 437 DKKLAQRKHFPSVNWLISYSKYSKALE 463
+ +L R P++N +S S+ A +
Sbjct: 339 ETELFYRGIRPAINVGLSVSRVGSAAQ 365
>AK108859
Length = 549
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 33/262 (12%)
Query: 217 VMEKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVIS----------QALSKY 266
++ + + + P+ TG + +DA+ P G I G GKT ++ S
Sbjct: 176 ILPRRSVNQPVQTGLKSVDAMVPIGRGQRELIIGDRQTGKTAVALDAMLNQGRWNKGSDE 235
Query: 267 SNSQAVVYVGCGERGNEMAEVLMDFPQLTMTTEDGREESVMKRTTLVANTSNMPVAAREA 326
+ +YV G++ + +A QL T E E MK + +VA T++ +
Sbjct: 236 TKKLYCIYVAVGQKRSTVA-------QLVKTLE---ENDAMKYSIIVAATASEAAPLQYI 285
Query: 327 SIYTGITIAEYYRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPA---YLAARL 383
+ +TG ++ E++RD G + ++ D ++ A A R++S L P YP YL +RL
Sbjct: 286 APFTGCSLGEWFRDNGKHALIVYDDLTKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 345
Query: 384 ASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIV--QVFWGLDKKLA 441
ERA K + GS+T + + GGD S + + +SI Q+F L+ +L
Sbjct: 346 ---LERAAK---MNDKHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIF--LEAELF 397
Query: 442 QRKHFPSVNWLISYSKYSKALE 463
+ P++N +S S+ A +
Sbjct: 398 YKGIRPAINVGLSVSRVGSAAQ 419
>AK108751
Length = 543
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 29/260 (11%)
Query: 217 VMEKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVIS----QALSKYSNSQA- 271
++ + + P+ TG + +DA+ P G I G GKT ++ ++++ Q
Sbjct: 171 ILPRQSVKEPMQTGIKPIDAMVPIGRGQRELIIGDRQTGKTAVAIDTILNQKRWNDGQDE 230
Query: 272 -----VVYVGCGERGNEMAEVLMDFPQLTMTTEDGREESVMKRTTLVANTSNMPVAAREA 326
VYV G++ + +A QL E E MK T +VA T++ +
Sbjct: 231 SKKLYCVYVAVGQKRSTVA-------QLVKVLE---ENDAMKYTIIVAATASEAAPLQYL 280
Query: 327 SIYTGITIAEYYRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPA---YLAARL 383
+ ++G I E++RD G + ++ D S+ A A R++S L P YP YL +RL
Sbjct: 281 APFSGCAIGEWFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 340
Query: 384 ASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQR 443
ERA K + GS+T + + GGD S + + +SI L+ +L +
Sbjct: 341 ---LERAAK---MNDTHGGGSLTALPVIETQGGDVSAFIPTNVISITDGQVYLESELFFK 394
Query: 444 KHFPSVNWLISYSKYSKALE 463
P++N +S S+ A +
Sbjct: 395 GIRPAINVGLSVSRVGSAAQ 414
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,157,846
Number of extensions: 915231
Number of successful extensions: 2389
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 2344
Number of HSP's successfully gapped: 19
Length of query: 621
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 514
Effective length of database: 11,448,903
Effective search space: 5884736142
Effective search space used: 5884736142
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)