Os01g0711000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14) (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2).
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Os01g0711000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14) (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.35 | 0.353 | 10.8 | 0.622 | 0.375 | -0.694 | -0.875 | 0.328 | 0.442 | 12.3 | 20.4 | 249 | -- | -- |
| 56.51 | 0.35 | 10.8 | 0.569 | 0.335 | -0.733 | -0.81 | -- | 0.439 | 12.3 | 20.52 | 329 | -- | -- |
| 58.92 | 0.357 | 10.8 | 0.575 | 0.341 | -0.698 | -- | 0.238 | 0.441 | 11.6 | 20.6 | 333 | -- | -- |
| 59.14 | 0.358 | 10.8 | 0.538 | 0.341 | -0.721 | -- | -- | 0.437 | 11.6 | 20.6 | 330 | -- | -- |
| 63.31 | 0.371 | 10.8 | 0.657 | -- | -0.753 | -- | 0.346 | 0.462 | -- | 20.6 | 695 | -- | -- |
| 74.75 | 0.405 | 10.8 | 0.335 | 0.313 | -- | -0.678 | -- | 0.285 | 11.4 | -- | -- | -- | -- |
| 76.39 | 0.409 | 10.8 | 0.305 | 0.329 | -- | -- | -- | 0.281 | 10.5 | -- | -- | -- | -- |
| 63.69 | 0.372 | 10.8 | 0.589 | -- | -0.797 | -- | -- | 0.455 | -- | 20.51 | 702 | -- | -- |
| 65.75 | 0.378 | 10.8 | -- | 0.359 | -0.6 | -- | -- | 0.361 | 11.4 | 20.5 | 218 | -- | -- |
| 83.02 | 0.426 | 10.8 | 0.299 | -- | -- | -- | -- | 0.279 | -- | -- | -- | -- | -- |
| 78.85 | 0.415 | 10.8 | -- | 0.327 | -- | -- | -- | 0.247 | 10.4 | -- | -- | -- | -- |
| 71.74 | 0.394 | 10.8 | -- | -- | -0.637 | -- | -- | 0.359 | -- | 20.5 | 579 | -- | -- |
| 85.38 | 0.431 | 10.8 | -- | -- | -- | -- | -- | 0.246 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.09 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 4 | 55.02 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 5 | 55.05 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 11 | 55.86 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 15 | 56.18 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 21 | 56.51 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 4 |
| 28 | 56.65 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 5 |
| 29 | 56.66 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 39 | 56.77 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 65 | 57.07 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 23 |
| 67 | 57.11 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 72 | 57.17 | temperature | 20.0 | 270 | < th | dose independent | rect. | 13 | 21 |
| 76 | 57.20 | temperature | 20.0 | 720 | > th | dose independent | rect. | 16 | 11 |
| 104 | 57.36 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 23 |
| 110 | 57.42 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 22 | 13 |
| 114 | 57.43 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 11 |
| 126 | 57.52 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 11 |
| 150 | 57.60 | temperature | 20.0 | 270 | > th | dose independent | sin | 11 | NA |
| 162 | 57.65 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |
| 178 | 57.68 | temperature | 20.0 | 270 | < th | dose independent | rect. | 22 | 23 |
| 182 | 57.70 | temperature | 20.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 200 | 57.74 | temperature | 20.0 | 270 | < th | dose independent | no | NA | NA |
| 205 | 57.74 | temperature | 20.0 | 270 | < th | dose independent | rect. | 18 | 23 |
| 235 | 57.83 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 23 |
| 236 | 57.84 | temperature | 20.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 241 | 57.85 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 8 |
| 306 | 58.00 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 318 | 58.04 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 10 |
| 327 | 58.05 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 348 | 58.10 | temperature | 20.0 | 720 | > th | dose independent | sin | 14 | NA |
| 404 | 58.24 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 405 | 58.25 | temperature | 20.0 | 270 | < th | dose independent | sin | 10 | NA |
| 467 | 58.38 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 477 | 58.39 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 22 |
| 499 | 58.44 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 528 | 58.48 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 561 | 58.56 | temperature | 30.0 | 90 | < th | dose dependent | no | NA | NA |
| 573 | 58.59 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 583 | 58.62 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 623 | 58.69 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 648 | 58.76 | temperature | 15.0 | 90 | > th | dose dependent | no | NA | NA |
| 812 | 59.06 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 18 |
| 866 | 59.14 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 16 |
| 914 | 59.21 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 13 |
| 919 | 59.22 | temperature | 20.0 | 1440 | > th | dose independent | no | NA | NA |
| 953 | 59.27 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 6 |