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Os09g0263700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0279) R2 : 0.743
β1 : 3.76 (0.104) R2dD : 0.805 R2D : 0.629
β2 : -- (--) R2dC : -- R2C : --
β3 : -0.767 (0.0823) R2dE : 0.0525 R2E : -0.0617
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.629 (0.0612) R2dN8 : 0.0872 R2N8 : -0.0453
σ : 0.519
deviance : 124.17
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 20.4
memory length : 150
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
118.82 0.512 10.1 3.89 0.0128 -0.687 0.746 0.753 0.658 16.7 20.46 57 -- --
121.13 0.513 10.1 3.76 0.0115 -0.742 1.06 -- 0.641 15.9 20.5 69 -- --
119.83 0.51 10.1 3.92 0.0474 -0.677 -- 0.874 0.683 17.6 20.51 73 -- --
123.84 0.518 10.1 3.75 0.083 -0.766 -- -- 0.64 18.4 20.5 150 -- --
119.91 0.51 10.1 3.93 -- -0.669 -- 0.929 0.67 -- 20.57 73 -- --
142.75 0.56 10.2 3.53 0.208 -- -0.735 -- 0.486 1.6 -- -- -- --
144.45 0.563 10.2 3.56 0.222 -- -- -- 0.491 24 -- -- -- --
124.17 0.519 10.1 3.76 -- -0.767 -- -- 0.629 -- 20.4 150 -- --
473.72 1.02 10.3 -- 0.349 0.247 -- -- -0.00188 0.898 23.7 3 -- --
147.56 0.568 10.2 3.57 -- -- -- -- 0.494 -- -- -- -- --
478.5 1.02 10.2 -- 0.273 -- -- -- 0.0948 0.721 -- -- -- --
479.1 1.02 10.2 -- -- 1.53 -- -- 0.0637 -- 15 59 -- --
483.17 1.03 10.2 -- -- -- -- -- 0.0986 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 116.25 temperature 20.0 270 > th dose independent rect. 23 22
2 116.58 radiation 10.0 14400 < th dose independent rect. 17 13
4 116.87 radiation 10.0 14400 < th dose independent rect. 17 3
8 116.89 radiation 10.0 14400 < th dose independent rect. 17 10
9 116.90 radiation 10.0 14400 < th dose independent rect. 17 7
19 117.34 wind 9.0 43200 > th dose dependent rect. 16 15
21 117.49 wind 1.0 43200 > th dose independent rect. 22 1
26 117.94 radiation 40.0 43200 < th dose dependent rect. 18 9
27 117.94 radiation 40.0 43200 < th dose dependent rect. 18 11
34 118.06 wind 9.0 43200 > th dose independent rect. 20 7
44 118.18 radiation 40.0 43200 < th dose dependent rect. 18 2
54 118.26 radiation 10.0 43200 < th dose dependent rect. 18 4
63 118.31 wind 9.0 43200 < th dose independent rect. 20 7
71 118.34 wind 9.0 43200 > th dose independent rect. 17 15
82 118.48 wind 9.0 43200 < th dose independent rect. 20 4
84 118.49 wind 9.0 43200 > th dose independent rect. 20 4
89 118.58 wind 9.0 43200 > th dose dependent rect. 17 7
92 118.62 wind 9.0 43200 < th dose independent rect. 17 15
99 118.81 temperature 20.0 270 < th dose independent rect. 22 19
102 118.82 temperature 20.0 720 > th dose independent rect. 17 19
109 118.88 wind 9.0 43200 < th dose independent rect. 20 11
120 119.05 wind 9.0 43200 > th dose dependent rect. 20 7
126 119.15 wind 9.0 43200 > th dose dependent rect. 20 9
133 119.23 wind 9.0 43200 > th dose dependent rect. 20 4
150 119.46 wind 9.0 43200 > th dose independent rect. 18 11
166 119.62 wind 9.0 43200 < th dose independent rect. 18 10
190 119.90 wind 9.0 43200 < th dose independent rect. 18 6
218 120.15 wind 9.0 43200 > th dose independent sin 11 NA
223 120.18 wind 1.0 43200 < th dose independent rect. 22 1
225 120.20 temperature 20.0 270 > th dose independent rect. 24 13
233 120.28 wind 9.0 43200 > th dose independent rect. 18 6
237 120.29 wind 9.0 43200 < th dose independent sin 11 NA
238 120.29 temperature 15.0 270 > th dose dependent rect. 24 22
244 120.31 temperature 15.0 720 > th dose dependent rect. 17 19
251 120.34 radiation 1.0 4320 > th dose dependent rect. 18 11
267 120.41 temperature 20.0 270 < th dose dependent rect. 23 19
272 120.45 temperature 25.0 270 < th dose dependent rect. 21 22
280 120.50 radiation 40.0 14400 < th dose independent rect. 15 14
285 120.52 radiation 40.0 14400 < th dose independent rect. 15 12
295 120.55 wind 1.0 43200 < th dose dependent rect. 20 1
298 120.56 radiation 1.0 14400 > th dose dependent rect. 18 1
313 120.59 radiation 40.0 14400 < th dose independent rect. 15 5
316 120.60 radiation 40.0 14400 < th dose independent rect. 15 7
322 120.61 radiation 20.0 4320 < th dose independent rect. 16 15
331 120.64 humidity 80.0 14400 > th dose dependent rect. 5 2
342 120.67 radiation 10.0 14400 > th dose dependent rect. 17 13
348 120.70 wind 9.0 43200 > th dose dependent sin 13 NA
349 120.71 temperature 20.0 270 < th dose independent sin 6 NA
426 120.91 wind 7.0 43200 > th dose dependent sin 11 NA
433 120.94 radiation 30.0 4320 < th dose independent rect. 1 7
443 120.96 radiation 30.0 4320 < th dose independent rect. 4 4
456 120.99 atmosphere 995.0 43200 > th dose independent rect. 5 11
463 121.00 temperature 20.0 10 > th dose independent no NA NA
470 121.01 radiation 30.0 4320 < th dose independent rect. 6 2
491 121.07 radiation 40.0 14400 < th dose independent rect. 15 1
492 121.07 humidity 80.0 14400 > th dose dependent rect. 22 1
523 121.16 temperature 20.0 270 > th dose independent sin 6 NA
525 121.16 atmosphere 995.0 43200 < th dose independent rect. 5 11
548 121.23 temperature 10.0 720 > th dose dependent rect. 24 5
563 121.27 temperature 20.0 270 < th dose dependent rect. 23 12
579 121.30 temperature 20.0 270 < th dose dependent sin 6 NA
589 121.33 atmosphere 995.0 43200 > th dose independent sin 0 NA
608 121.37 atmosphere 995.0 43200 < th dose independent sin 0 NA
609 121.37 wind 7.0 43200 < th dose independent rect. 8 1
624 121.42 atmosphere 995.0 43200 > th dose independent rect. 5 16
639 121.46 wind 7.0 43200 > th dose independent rect. 8 1
659 121.51 temperature 20.0 270 < th dose independent no NA NA
670 121.53 temperature 20.0 10 > th dose independent rect. 17 23
675 121.55 temperature 20.0 10 < th dose independent rect. 1 23
676 121.55 temperature 20.0 270 < th dose independent rect. 13 23
682 121.56 temperature 15.0 10 > th dose dependent rect. 2 21
711 121.65 temperature 20.0 270 > th dose independent rect. 7 23
712 121.66 atmosphere 995.0 43200 < th dose independent rect. 14 1
731 121.69 temperature 25.0 270 < th dose dependent rect. 24 23
745 121.74 humidity 60.0 14400 > th dose independent rect. 18 14
760 121.78 atmosphere 995.0 43200 < th dose independent rect. 8 8
765 121.79 atmosphere 995.0 43200 < th dose independent rect. 11 5
772 121.80 wind 7.0 43200 < th dose independent rect. 20 1
775 121.80 atmosphere 995.0 43200 < th dose independent rect. 7 15
778 121.80 atmosphere 995.0 43200 < th dose dependent rect. 14 2
780 121.81 atmosphere 995.0 43200 > th dose independent rect. 11 5
781 121.81 precipitation 0.1 43200 > th dose dependent rect. 21 1
794 121.84 wind 1.0 43200 > th dose independent rect. 9 1
817 121.87 wind 7.0 43200 > th dose dependent rect. 1 2
820 121.88 atmosphere 995.0 43200 > th dose independent rect. 12 3
822 121.88 temperature 20.0 10 < th dose independent rect. 5 23
835 121.92 wind 7.0 43200 < th dose independent rect. 6 3
845 121.93 temperature 30.0 720 < th dose dependent rect. 20 13
851 121.95 temperature 20.0 10 < th dose independent no NA NA
854 121.95 temperature 20.0 10 < th dose independent rect. 11 23
855 121.95 temperature 20.0 10 < th dose independent rect. 15 23
856 121.95 temperature 20.0 10 < th dose independent rect. 17 23
864 121.97 temperature 20.0 10 < th dose independent rect. 21 23
869 121.98 temperature 20.0 10 < th dose independent rect. 9 23
871 121.98 atmosphere 995.0 43200 < th dose dependent rect. 14 8
872 121.98 temperature 30.0 720 < th dose dependent rect. 21 11
890 122.00 temperature 20.0 10 < th dose independent rect. 19 23
894 122.01 temperature 20.0 10 < th dose independent rect. 23 23
902 122.03 temperature 20.0 90 < th dose independent rect. 9 23
917 122.04 temperature 20.0 10 < th dose independent rect. 3 23
923 122.05 radiation 30.0 4320 > th dose dependent rect. 15 17
926 122.06 temperature 20.0 10 < th dose independent rect. 7 23
945 122.11 humidity 60.0 14400 > th dose independent rect. 18 4
950 122.12 humidity 60.0 14400 > th dose independent rect. 18 11
956 122.12 temperature 25.0 720 < th dose dependent rect. 19 17
967 122.15 radiation 30.0 43200 > th dose independent rect. 16 1
978 122.15 humidity 60.0 14400 > th dose independent rect. 18 9