BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0172800 Os02g0172800|AK103838
(241 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0172800 Similar to Zinc-binding protein 394 e-110
Os06g0666100 Protein of unknown function DUF597 family protein 298 3e-81
Os02g0183000 Protein of unknown function DUF597 family protein 192 2e-49
Os02g0692700 Protein of unknown function DUF597 family protein 122 3e-28
Os04g0591100 Protein of unknown function DUF597 family protein 121 5e-28
Os08g0560300 Protein of unknown function DUF597 family protein 106 1e-23
Os01g0518000 Protein of unknown function DUF597 family protein 98 5e-21
Os01g0517800 Protein of unknown function DUF597 family protein 97 1e-20
Os10g0574700 Protein of unknown function DUF597 family protein 94 6e-20
Os02g0661400 93 2e-19
Os09g0118900 86 3e-17
Os09g0116100 Protein of unknown function DUF597 family protein 86 3e-17
Os02g0193400 76 2e-14
>Os02g0172800 Similar to Zinc-binding protein
Length = 241
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/241 (82%), Positives = 199/241 (82%)
Query: 1 MGMRPGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCTSICPHCAPSHRHHPLLQVRR 60
MGMRPGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCTSICPHCAPSHRHHPLLQVRR
Sbjct: 1 MGMRPGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCTSICPHCAPSHRHHPLLQVRR 60
Query: 61 YVYNDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSRPFKGSGNVCLTCDRILQEP 120
YVYNDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSRPFKGSGNVCLTCDRILQEP
Sbjct: 61 YVYNDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSRPFKGSGNVCLTCDRILQEP 120
Query: 121 FHFCSLSCKVDHVMVHGGGDLSNIILLHPHHHPNTATASAFPRFEDLRVGXXXXXXXITA 180
FHFCSLSCKVDHVMVHGGGDLSNIILLHPHHHPNTATASAFPRFEDLRVG ITA
Sbjct: 121 FHFCSLSCKVDHVMVHGGGDLSNIILLHPHHHPNTATASAFPRFEDLRVGADDDAAAITA 180
Query: 181 VTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPQILGLGSRRKGAPHRSPL 240
VTPE FFPQILGLGSRRKGAPHRSPL
Sbjct: 181 VTPEGRYGGGGGGSSDNGGGDGGGGEVGEVKRKKKKGGGFFPQILGLGSRRKGAPHRSPL 240
Query: 241 S 241
S
Sbjct: 241 S 241
>Os06g0666100 Protein of unknown function DUF597 family protein
Length = 261
Score = 298 bits (762), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 142/169 (84%), Positives = 151/169 (89%), Gaps = 1/169 (0%)
Query: 1 MGMRPGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCTSICPHCAPSHRHHPLLQVRR 60
MGMRPGWVGGLVEESFFVGCPAHESRKKNEKNIFCL CC SICPHCAPSHRHHPLLQVRR
Sbjct: 1 MGMRPGWVGGLVEESFFVGCPAHESRKKNEKNIFCLGCCASICPHCAPSHRHHPLLQVRR 60
Query: 61 YVYNDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSRPFKGSGNVCLTCDRILQEP 120
YVYNDVVRL DL+KLI+CS+VQPYTINSAKVIFLKPRPQSRPFKGSGN+CLTCDRILQEP
Sbjct: 61 YVYNDVVRLDDLDKLIDCSFVQPYTINSAKVIFLKPRPQSRPFKGSGNICLTCDRILQEP 120
Query: 121 FHFCSLSCKVDHVMVHGGGDLSNIILLHPHHHPNTATASAFPRFEDLRV 169
FHFC LSCKVDHVM+ GGDLSNI+ + A+ FPRFE+LRV
Sbjct: 121 FHFCCLSCKVDHVMMQ-GGDLSNILYMSGGSSGEPDLAAGFPRFENLRV 168
>Os02g0183000 Protein of unknown function DUF597 family protein
Length = 232
Score = 192 bits (487), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/139 (64%), Positives = 107/139 (76%), Gaps = 1/139 (0%)
Query: 4 RPGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCTSICPHCAPSHRHHPLLQVRRYVY 63
+P W+ L + FF+ C HE KKNEKNI CL CCTSICPHC +HR H LLQVRRYVY
Sbjct: 3 KPAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCTSICPHCVAAHRVHRLLQVRRYVY 62
Query: 64 NDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSRPFKGSGNVCLTCDRILQEPFHF 123
+DVVRL DLEKLI+CS VQ YTINS+KV+FLK RPQ+R FKGSGN+C +CDR LQEP+
Sbjct: 63 HDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQNRQFKGSGNICTSCDRSLQEPYFH 122
Query: 124 CSLSCKVDHVMVHGGGDLS 142
CSL CKV++++ DLS
Sbjct: 123 CSLDCKVEYIL-RQKKDLS 140
>Os02g0692700 Protein of unknown function DUF597 family protein
Length = 287
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Query: 5 PGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCT-SICPHCAPSHRHHPLLQVRRYVY 63
P W+ L+ SFFV C H K+E N++CL C ++C C HR H +Q+RR Y
Sbjct: 63 PPWLKPLLSTSFFVQCRIHADAHKSECNMYCLDCMNGALCSLCLSHHRDHHAIQIRRSSY 122
Query: 64 NDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSRPFKGSGNVCLTCDRILQEPFHF 123
+DV+R+ +++K+++ + VQ Y INSA+V+FL RPQ RP KG N C C+R L + F F
Sbjct: 123 HDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRF 182
Query: 124 CSLSCKVDHVMVHGG 138
CSL CK+ V GG
Sbjct: 183 CSLGCKI--VGTSGG 195
>Os04g0591100 Protein of unknown function DUF597 family protein
Length = 249
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 86/152 (56%), Gaps = 8/152 (5%)
Query: 5 PGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCT-SICPHCAPSHRHHPLLQVRRYVY 63
P W+ L+ SFF C H K+E N++CL C ++C C HR H +Q+RR Y
Sbjct: 34 PPWLKPLLATSFFGQCKLHADSHKSECNMYCLDCMNGALCSQCLSYHRDHHAIQIRRSSY 93
Query: 64 NDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSRPFKGSGNVCLTCDRILQEPFHF 123
+DV+R+ +++K+++ + VQ Y INSA+V+FL RPQ RP KG N C C+R L + F F
Sbjct: 94 HDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDTFRF 153
Query: 124 CSLSCKVDHV-------MVHGGGDLSNIILLH 148
CSL CK+ H GG + LH
Sbjct: 154 CSLGCKIVGTSGDYRGRKRHAGGGIKKTKKLH 185
>Os08g0560300 Protein of unknown function DUF597 family protein
Length = 200
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 5 PGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCTSICPHC--APSHRH--HPLLQVRR 60
P W+ L+ FF+ C AH + +NE N+FCL C + P C SHRH H ++Q+RR
Sbjct: 12 PEWLETLLSTRFFLACGAHPASPRNECNMFCLDCPSPSPPFCYYCRSHRHQSHRVIQIRR 71
Query: 61 YVYNDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSR-------PFKGSGNVCLTC 113
Y+DVVR+ ++E +++ S VQ Y INSAKV+FL RPQ R S C C
Sbjct: 72 SSYHDVVRVTEVEDVLDISGVQTYVINSAKVLFLNERPQPRGAGAAAGKAAASPYNCQIC 131
Query: 114 DRILQEPFHFCSLSCKVDHVMVHGGG 139
R L +PF FCSL CK+ G G
Sbjct: 132 ARALLDPFRFCSLGCKLVDTKTGGRG 157
>Os01g0518000 Protein of unknown function DUF597 family protein
Length = 217
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Query: 5 PGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCT---SICPHCAPSH-RHHPLLQVRR 60
P WV L+ FF C +H +NE N FC+ C T S C +C SH H ++Q+RR
Sbjct: 8 PSWVELLLSTQFFTTCSSHLISPRNECNFFCIDCQTPQASFCYYCRLSHHSSHHVIQIRR 67
Query: 61 YVYNDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSRPFKGSGNV---------CL 111
Y+DVV++ +LE +++ S VQ Y INS++V++L RPQ R G N C
Sbjct: 68 SSYHDVVKVSELEDILDISDVQTYVINSSRVVYLTERPQLRSC-GVSNTKLSSSQTYKCE 126
Query: 112 TCDRILQEPFHFCSLSCK 129
C R L + F FCSL C
Sbjct: 127 ICSRTLLDDFRFCSLGCN 144
>Os01g0517800 Protein of unknown function DUF597 family protein
Length = 236
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 20/143 (13%)
Query: 5 PGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCT---SICPHCAPSH-RHHPLLQVRR 60
P W+ L+ FF C +H + +NE N+FC+ C + C +C H H ++Q+RR
Sbjct: 7 PPWLELLLSTQFFNTCTSHHNSPRNECNLFCIDCQAPEAAFCYYCRSCHHSSHRVIQIRR 66
Query: 61 YVYNDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSRPFKGSGNV----------- 109
Y+DVV++ +LE +++ S VQ Y INSA+V+FL RPQ +G G +
Sbjct: 67 SSYHDVVKVSELEDILDISDVQTYVINSARVVFLNERPQ---LRGCGVLAIKSSPSSLSS 123
Query: 110 --CLTCDRILQEPFHFCSLSCKV 130
C TC R+L + F FCSL C +
Sbjct: 124 YNCETCSRVLLDAFRFCSLGCNL 146
>Os10g0574700 Protein of unknown function DUF597 family protein
Length = 254
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 10/136 (7%)
Query: 5 PGWVGGLVEESFFVGCPAH-ESRKKNEKNIFCLACCTSICPHCAP--------SHRHHPL 55
P W+ L+ SFF C H +S + E N+FCL C A +HR H
Sbjct: 40 PRWLSPLLSASFFSQCKVHADSHRSGECNMFCLDCAADADAAAAALCSLCLAHNHRDHHT 99
Query: 56 LQVRRYVYNDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSRPFKGS-GNVCLTCD 114
+Q+RR Y+DV+R+ D+++ ++ VQ Y INSA+V+FL RPQ + KG+ N+C C
Sbjct: 100 IQIRRSSYHDVIRVSDIQRFMDIGGVQTYVINSARVVFLNERPQHKAGKGAVANICEVCS 159
Query: 115 RILQEPFHFCSLSCKV 130
R L + F FCSL CKV
Sbjct: 160 RSLLDNFRFCSLGCKV 175
>Os02g0661400
Length = 226
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 73/146 (50%), Gaps = 18/146 (12%)
Query: 5 PGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCTSICPHCAPSHRHHPLLQVRRYVYN 64
P W+ GL+ E FF C AH +KN+KN FC+ C ++C HC P H +LQ+ +Y
Sbjct: 10 PQWLRGLLSEEFFDSCGAHPGERKNDKNHFCVDCAAALCRHCLPHDASHGVLQIWKYASC 69
Query: 65 DVVRLGDLEKLIECSYVQPY-----------------TINSAKVIFLKPRPQSRPFKGSG 107
VVR+ DL KL +C+ +Q Y T++ +V+FL R +
Sbjct: 70 FVVRVDDL-KLFDCNGIQTYCTDHESYSYMVSGVQSHTLSDHEVVFLNERTARKRSASVE 128
Query: 108 NVCLTCDRILQEPFHFCSLSCKVDHV 133
N C C R L +CSL CKV H+
Sbjct: 129 NPCAACARPLPSGHDYCSLFCKVKHL 154
>Os09g0118900
Length = 244
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 73/133 (54%), Gaps = 9/133 (6%)
Query: 5 PGWVGGLVEESFFVGCPAH---ESRKKNEKNIFCLACCTSICPHCAPSHRHHPLLQVRRY 61
P W+ L+ +F+ C H E+ + E++IFC C +ICPHC H LL+VRRY
Sbjct: 68 PLWLNVLLRTAFWRKCDVHDQLENTHRAEESIFCTNCLKTICPHCKHDQPSHQLLKVRRY 127
Query: 62 VYNDVVRLGDLEKL-IECSYVQPYTINSAKVIFLKPRPQS---RPFKGSGNVCLTCDRIL 117
++ VV + D++ I+ SY+Q + N KV+ L+P +S RP G+ C TC L
Sbjct: 128 IFRSVVHVKDMQNFGIDMSYIQTFKCNGHKVVHLRPMKRSKHHRPKAGTPR-CTTCQCWL 186
Query: 118 QE-PFHFCSLSCK 129
P CSLSCK
Sbjct: 187 HNAPSLTCSLSCK 199
>Os09g0116100 Protein of unknown function DUF597 family protein
Length = 247
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 75/133 (56%), Gaps = 9/133 (6%)
Query: 5 PGWVGGLVEESFFVGCPAHESRK---KNEKNIFCLACCTSICPHCAPSHRHHPLLQVRRY 61
P W+ L+ F+ C HE + + E++IFC+ C +ICPHC H LL+VRRY
Sbjct: 61 PLWLNVLLRTIFWRKCDVHEQLENAHRAEESIFCINCLKTICPHCTHDEPSHQLLKVRRY 120
Query: 62 VYNDVVRLGDLEKL-IECSYVQPYTINSAKVIFLKPRPQS---RPFKGSGNVCLTCDRIL 117
++ VVR+ D++ I+ SY+Q + N KV+ L+P +S RP G+ + C +C L
Sbjct: 121 IFRSVVRVKDMQNFGIDMSYIQTFKCNGHKVVHLRPIKRSEHHRPKAGTPH-CTSCHCWL 179
Query: 118 QE-PFHFCSLSCK 129
P CSLSCK
Sbjct: 180 HNAPSLTCSLSCK 192
>Os02g0193400
Length = 297
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 32/156 (20%)
Query: 5 PGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCTSI----------CPHCAPS----- 49
P W+ L+ FF C AH +NE N +CL C + C C +
Sbjct: 10 PAWLRSLLGARFFEACAAHRGMSRNECNQYCLTCAAAADDAGGAAAVGCQWCVVAAHGGG 69
Query: 50 ------HRHHPLLQVRRYVYNDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSRPF 103
HRH ++QVRR Y++VVR+ +LE+ ++ + VQ Y IN +V+FL RPQ+ P
Sbjct: 70 AGRDRGHRHR-VVQVRRSSYHNVVRVSELERTLDLTRVQTYVINRDRVVFLNERPQA-PR 127
Query: 104 KGSGNVCLTCDR---------ILQEPFHFCSLSCKV 130
G +L F FCSL CK+
Sbjct: 128 NGRCAAAAAVACAACEACGRGLLDVAFRFCSLGCKL 163
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.141 0.468
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,904,412
Number of extensions: 304189
Number of successful extensions: 896
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 880
Number of HSP's successfully gapped: 14
Length of query: 241
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 143
Effective length of database: 11,918,829
Effective search space: 1704392547
Effective search space used: 1704392547
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 154 (63.9 bits)