BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0907400 Os01g0907400|AK068952
(1286 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0907400 Transcription factor jumonji, JmjN domain cont... 2516 0.0
Os12g0279100 Transcription factor jumonji, JmjN domain cont... 519 e-147
Os10g0577600 Similar to PLU-1 protein 239 7e-63
Os05g0196500 Transcription factor jumonji, JmjN domain cont... 173 6e-43
Os05g0302300 Transcription factor jumonji, JmjN domain cont... 169 2e-41
Os03g0148800 Zinc finger, C2H2-type domain containing protein 155 2e-37
Os03g0151300 Similar to Early flowering 6 143 8e-34
Os12g0169500 72 2e-12
>Os01g0907400 Transcription factor jumonji, JmjN domain containing protein
Length = 1286
Score = 2516 bits (6520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1210/1253 (96%), Positives = 1210/1253 (96%)
Query: 18 WLRSLPVAPEFRPTAAEFADPVSYILKIEPAAAPYGICXXXXXXXXXXXXATFSNLSRSF 77
WLRSLPVAPEFRPTAAEFADPVSYILKIEPAAAPYGIC ATFSNLSRSF
Sbjct: 18 WLRSLPVAPEFRPTAAEFADPVSYILKIEPAAAPYGICKVVPPLPPPPKKATFSNLSRSF 77
Query: 78 AALHPDDRSPSFPTRHQQVGLCPRRTRPGLKPVWRSSHRYTLPQFESKAGATRKSLLAGL 137
AALHPDDRSPSFPTRHQQVGLCPRRTRPGLKPVWRSSHRYTLPQFESKAGATRKSLLAGL
Sbjct: 78 AALHPDDRSPSFPTRHQQVGLCPRRTRPGLKPVWRSSHRYTLPQFESKAGATRKSLLAGL 137
Query: 138 NFPASRQLTPLDHEVLFWRASADRPIVVEYGSDMSGSGFSXXXXXXXXXXXXXXXXXXXX 197
NFPASRQLTPLDHEVLFWRASADRPIVVEYGSDMSGSGFS
Sbjct: 138 NFPASRQLTPLDHEVLFWRASADRPIVVEYGSDMSGSGFSPCAAQPQPPPQQQPTARAAA 197
Query: 198 HLGETAWNMRGVARSPGSLLRFMPEDVPGVTTPMLYVGMMFSWFAWHVEDHDLHSLNYMH 257
HLGETAWNMRGVARSPGSLLRFMPEDVPGVTTPMLYVGMMFSWFAWHVEDHDLHSLNYMH
Sbjct: 198 HLGETAWNMRGVARSPGSLLRFMPEDVPGVTTPMLYVGMMFSWFAWHVEDHDLHSLNYMH 257
Query: 258 LGAAKTWYGVPRDAALAFEDVVREHGYGGEVNPLETFATLGQKTTVMSPEVLVESGIPCC 317
LGAAKTWYGVPRDAALAFEDVVREHGYGGEVNPLETFATLGQKTTVMSPEVLVESGIPCC
Sbjct: 258 LGAAKTWYGVPRDAALAFEDVVREHGYGGEVNPLETFATLGQKTTVMSPEVLVESGIPCC 317
Query: 318 RLVQNAGEFVVTFPGSYHCGFSHGFNCGEASNIATPEWLRIAKEAAIRRASINRPPMVSH 377
RLVQNAGEFVVTFPGSYHCGFSHGFNCGEASNIATPEWLRIAKEAAIRRASINRPPMVSH
Sbjct: 318 RLVQNAGEFVVTFPGSYHCGFSHGFNCGEASNIATPEWLRIAKEAAIRRASINRPPMVSH 377
Query: 378 YQLLYDLALSMRFREPSNGEMETRSSRIKEKKKCEGEQLVKKMFIQNVIEDNELLSHLLN 437
YQLLYDLALSMRFREPSNGEMETRSSRIKEKKKCEGEQLVKKMFIQNVIEDNELLSHLLN
Sbjct: 378 YQLLYDLALSMRFREPSNGEMETRSSRIKEKKKCEGEQLVKKMFIQNVIEDNELLSHLLN 437
Query: 438 DGSSCIILPANAHDGPGLSTLRSTDQSNMNSRISHNLCSREEAPEASGCLSPNRNGDTRN 497
DGSSCIILPANAHDGPGLSTLRSTDQSNMNSRISHNLCSREEAPEASGCLSPNRNGDTRN
Sbjct: 438 DGSSCIILPANAHDGPGLSTLRSTDQSNMNSRISHNLCSREEAPEASGCLSPNRNGDTRN 497
Query: 498 CISSDTHNMEGDKGDIMSATGLLDQGLLSCVTCGILSFSCVAVLKPRDSTARYLMSADSN 557
CISSDTHNMEGDKGDIMSATGLLDQGLLSCVTCGILSFSCVAVLKPRDSTARYLMSADSN
Sbjct: 498 CISSDTHNMEGDKGDIMSATGLLDQGLLSCVTCGILSFSCVAVLKPRDSTARYLMSADSN 557
Query: 558 SINNQLSISGGSILADAPTNERNGVISRPYSEHCCNEIMADDAEIDKNSALDLLAFAHGG 617
SINNQLSISGGSILADAPTNERNGVISRPYSEHCCNEIMADDAEIDKNSALDLLAFAHGG
Sbjct: 558 SINNQLSISGGSILADAPTNERNGVISRPYSEHCCNEIMADDAEIDKNSALDLLAFAHGG 617
Query: 618 QPDPEEDPLEKILKIAHGINKSQPNSSNNVGCVGTKLSSSSTERQERPSSQNAHCNGSSV 677
QPDPEEDPLEKILKIAHGINKSQPNSSNNVGCVGTKLSSSSTERQERPSSQNAHCNGSSV
Sbjct: 618 QPDPEEDPLEKILKIAHGINKSQPNSSNNVGCVGTKLSSSSTERQERPSSQNAHCNGSSV 677
Query: 678 ISNGPKGVRTRNKYQLKMVLSEGFQAKDIYSAKEKKVQSEPSSSKGDVKETIDVSGTEND 737
ISNGPKGVRTRNKYQLKMVLSEGFQAKDIYSAKEKKVQSEPSSSKGDVKETIDVSGTEND
Sbjct: 678 ISNGPKGVRTRNKYQLKMVLSEGFQAKDIYSAKEKKVQSEPSSSKGDVKETIDVSGTEND 737
Query: 738 VGCKSTTISVSEHRGSTKNMYSVKEKKVQSKPSSLKGTVKETVDVSGTENDARCKSITIS 797
VGCKSTTISVSEHRGSTKNMYSVKEKKVQSKPSSLKGTVKETVDVSGTENDARCKSITIS
Sbjct: 738 VGCKSTTISVSEHRGSTKNMYSVKEKKVQSKPSSLKGTVKETVDVSGTENDARCKSITIS 797
Query: 798 VSEHRGSTPMTNSLAASIVKPDKDSSRMHVFCLEHAIEVEKQLHAIGGSNIMLICRPEYP 857
VSEHRGSTPMTNSLAASIVKPDKDSSRMHVFCLEHAIEVEKQLHAIGGSNIMLICRPEYP
Sbjct: 798 VSEHRGSTPMTNSLAASIVKPDKDSSRMHVFCLEHAIEVEKQLHAIGGSNIMLICRPEYP 857
Query: 858 KIEAEARLLGEEMGLVYDWKGIHFKEANMEDRQKIQEVLRDEEAIPTSSDWAVKLGINLY 917
KIEAEARLLGEEMGLVYDWKGIHFKEANMEDRQKIQEVLRDEEAIPTSSDWAVKLGINLY
Sbjct: 858 KIEAEARLLGEEMGLVYDWKGIHFKEANMEDRQKIQEVLRDEEAIPTSSDWAVKLGINLY 917
Query: 918 YSANLAKSPLYNKQMPYNRVIYRAFGCDSPNDSPVMFNTCERKQSHQKKIVVAGRWCGKV 977
YSANLAKSPLYNKQMPYNRVIYRAFGCDSPNDSPVMFNTCERKQSHQKKIVVAGRWCGKV
Sbjct: 918 YSANLAKSPLYNKQMPYNRVIYRAFGCDSPNDSPVMFNTCERKQSHQKKIVVAGRWCGKV 977
Query: 978 WMSKQVHPYLAHRVESQEAEEADRICSYHFDEKHKAEPVGNSSRVEASKRKSSSLTDVTE 1037
WMSKQVHPYLAHRVESQEAEEADRICSYHFDEKHKAEPVGNSSRVEASKRKSSSLTDVTE
Sbjct: 978 WMSKQVHPYLAHRVESQEAEEADRICSYHFDEKHKAEPVGNSSRVEASKRKSSSLTDVTE 1037
Query: 1038 SSNRRGEIPGEETNTKRPKHSQENNLRALETAAEVVVPSPAGTGLRVSSRIANRANKLKS 1097
SSNRRGEIPGEETNTKRPKHSQENNLRALETAAEVVVPSPAGTGLRVSSRIANRANKLKS
Sbjct: 1038 SSNRRGEIPGEETNTKRPKHSQENNLRALETAAEVVVPSPAGTGLRVSSRIANRANKLKS 1097
Query: 1098 KMEKEDVPSSRPKSNIKEKSSHASGQKSNVQEANANSASHLRAMPPXXXXXXXXXXXIRT 1157
KMEKEDVPSSRPKSNIKEKSSHASGQKSNVQEANANSASHLRAMPP IRT
Sbjct: 1098 KMEKEDVPSSRPKSNIKEKSSHASGQKSNVQEANANSASHLRAMPPKQKAEAEAKKQIRT 1157
Query: 1158 PKPPKQAVEYSCDIEGCSMSFRTKRDLSLHKSDICPVKGCGKKFFSHKYLLQHRKVHTDD 1217
PKPPKQAVEYSCDIEGCSMSFRTKRDLSLHKSDICPVKGCGKKFFSHKYLLQHRKVHTDD
Sbjct: 1158 PKPPKQAVEYSCDIEGCSMSFRTKRDLSLHKSDICPVKGCGKKFFSHKYLLQHRKVHTDD 1217
Query: 1218 RPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPYVCHEPGCAQTFRFVSDFSRH 1270
RPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPYVCHEPGCAQTFRFVSDFSRH
Sbjct: 1218 RPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPYVCHEPGCAQTFRFVSDFSRH 1270
>Os12g0279100 Transcription factor jumonji, JmjN domain containing protein
Length = 1366
Score = 519 bits (1336), Expect = e-147, Method: Compositional matrix adjust.
Identities = 304/654 (46%), Positives = 378/654 (57%), Gaps = 71/654 (10%)
Query: 18 WLRSLPVAPEFRPTAAEFADPVSYILKIEPAAAPYGICXXXXXXXXXXXXATFSNLSRSF 77
WLR+LPVAPE+ PT AEFADP++YIL+IEP A+ YGIC TF L +F
Sbjct: 13 WLRTLPVAPEYHPTLAEFADPIAYILRIEPEASRYGICKIVPPLPRPPEDDTFRRLQAAF 72
Query: 78 AALHPD--DRSPSFPTRHQQVGLCPRRTRPGLKPVWRSSHRYTLPQFESKAGATRKSLLA 135
AA D SP+FPTR QQVGL R R + VW S RYTL F +KA A
Sbjct: 73 AAAASSNGDPSPTFPTRLQQVGLSARNRRAASRRVWESGERYTLEAFRAKAAEFEPPRHA 132
Query: 136 GLNFPASRQLTPLDHEVLFWRASADRPIVVEYGSDMSGSGFSXXXXXXXXXXXXXXXXXX 195
R T L E LFW A A RP VEYG+DM GSGF+
Sbjct: 133 A----PPRNPTHLQLEALFWAACASRPFSVEYGNDMPGSGFASPDELPDAANATD----- 183
Query: 196 XXHLGETAWNMRGVARSPGSLLRFMPEDVPGVTTPMLYVGMMFSWFAWHVEDHDLHSLNY 255
+GET WNMR R+ GSLLR M DV GVTTPMLYV M++SWFAWHVEDH+LHSLN+
Sbjct: 184 ---VGETEWNMRVAPRARGSLLRAMARDVAGVTTPMLYVAMLYSWFAWHVEDHELHSLNF 240
Query: 256 MHLGAAKTWYGVPRDAALAFEDVVREHGYGGEVNPLETFATLGQKTTVMSPEVLVESGIP 315
+H G AKTWYGVPRDA LAFE+ VR HGY ++N + F TL +KTTV+SPEVL+ +G+P
Sbjct: 241 LHFGKAKTWYGVPRDAMLAFEETVRVHGYADDLNAIMAFQTLNEKTTVLSPEVLLSAGVP 300
Query: 316 CCRLVQNAGEFVVTFPGSYHCGFSHGFNCGEASNIATPEWLRIAKEAAIRRASINRPPMV 375
CCRLVQ AGEFV+TFPG+YH GFSHGFNCGEASNIATP WL++AKEAAIRRAS N PMV
Sbjct: 301 CCRLVQKAGEFVITFPGAYHSGFSHGFNCGEASNIATPHWLQVAKEAAIRRASTNCGPMV 360
Query: 376 SHYQLLYDLALSMRFREPSNGEMETRSSRIKEKKKCEGEQLVKKMFIQNVIEDNELLSHL 435
SHYQLLY+LALS+R REP N RSSR+++K K EG+ +VK+ F+ +V E+N LLS L
Sbjct: 361 SHYQLLYELALSLRPREPKNFYSVPRSSRLRDKNKNEGDIMVKENFVGSVTENNNLLSAL 420
Query: 436 LNDGSSCIILPANAHDGPGLSTLRSTDQSNMNSRISHNLCS------------------R 477
L D +SCII+P P ++ + + R + CS
Sbjct: 421 L-DKNSCIIVPNADFFVPSFPVALESEVT-VKQRFTAGPCSISQQGAENMAADHVAVDKV 478
Query: 478 EEAPEASGCLSP---------NRN-GDTRN--------CISSDTHNMEG-DKGDIMSATG 518
E + SG L P NR +T+ C+S+ G D A G
Sbjct: 479 TEIQDMSGSLYPCETSLVGCSNRKLYETKYGQRDAAALCLSTSEIQSRGIDTARSHPAGG 538
Query: 519 LLDQGLLSCVTCGILSFSCVAVLKPRDSTARYLMSAD-----------------SNSINN 561
+LDQG L CV CGILSF+CVA+++PR++ +++MS + SN I+
Sbjct: 539 ILDQGRLPCVQCGILSFACVAIIQPREAAVQFIMSKECISSSAKQGGIGASDDTSNWIDQ 598
Query: 562 QLSISGGSILADAPTNERNGVISRPYSEHCCNEIMADDAEIDKNSALDLLAFAH 615
IS A + +S + C E+ A + + SAL LLA A+
Sbjct: 599 SHEISPPPGPASGTDDNVKHAVSLAHVSDRCRELYASNTD-GCTSALGLLASAY 651
Score = 225 bits (574), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 139/183 (75%), Gaps = 4/183 (2%)
Query: 814 SIVKPDKDSSRMHVFCLEHAIEVEKQLHAIGGSNIMLICRPEYPKIEAEARLLGEEMGLV 873
++++ +KDS RMHVFCLEHA+E QL IGG+NIML+C PEYP+ E+ A+++ EE+G+
Sbjct: 783 TMLRYNKDSCRMHVFCLEHALETWTQLQQIGGANIMLLCHPEYPRAESAAKVIAEELGIK 842
Query: 874 YDWKGIHFKEANMEDRQKIQEVLRDEEAIPTSSDWAVKLGINLYYSANLAKSPLYNKQMP 933
+DWK I FKEA ED +KIQ L+DE+A PT SDWAVK+GIN+YYSA +KSPLY+KQ+P
Sbjct: 843 HDWKDITFKEATEEDVKKIQLALQDEDAEPTGSDWAVKMGINIYYSAKQSKSPLYSKQIP 902
Query: 934 YNRVIYRAFGCDSPNDSPVMFNTCERKQSHQKKIVVAGRWCGKVWMSKQVHPYLAHRVES 993
YN +IY+AFG ++P DS + C++ S +KK VAG WCGKVWMS QVHP LA E
Sbjct: 903 YNSIIYKAFGQENP-DSLTDYG-CQKSGSTKKK--VAGWWCGKVWMSNQVHPLLAREREE 958
Query: 994 QEA 996
Q +
Sbjct: 959 QNS 961
Score = 200 bits (509), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 83/108 (76%), Positives = 90/108 (83%)
Query: 1163 QAVEYSCDIEGCSMSFRTKRDLSLHKSDICPVKGCGKKFFSHKYLLQHRKVHTDDRPLTC 1222
+ ++ CDIEGC MSF T++DL LHK DICPVKGC KKFF HKYLLQHRKVH D+RPL C
Sbjct: 1243 KVAKFPCDIEGCDMSFSTQQDLLLHKRDICPVKGCKKKFFCHKYLLQHRKVHIDERPLKC 1302
Query: 1223 PWKGCNMAFKWPWARTEHLRVHTGDRPYVCHEPGCAQTFRFVSDFSRH 1270
WKGC AFKWPWARTEH+RVHTG RPY C EPGC QTFRFVSDFSRH
Sbjct: 1303 TWKGCKKAFKWPWARTEHMRVHTGVRPYECQEPGCGQTFRFVSDFSRH 1350
>Os10g0577600 Similar to PLU-1 protein
Length = 871
Score = 239 bits (611), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 188/372 (50%), Gaps = 41/372 (11%)
Query: 18 WLRSLPVAPEFRPTAAEFADPVSYILKIEPAAAPYGICXXXXXXXXXXXXATFSNLSRSF 77
W+ + P + PT EF DP+ YI KI P A+ YGIC S +S S
Sbjct: 109 WIDKIEECPVYYPTKEEFEDPIGYIQKIAPVASKYGICK------------IVSPVSASV 156
Query: 78 AA---LHPDDRSPSFPTRHQQVGLCPRRTRPGLKPVWRSSHRYTLPQFESKAGATRKSLL 134
A L + F TR Q + L + + S +YT +E A +
Sbjct: 157 PAGVVLMKEQPGFKFMTRVQPLRLA-KWAEDDTVTFFMSERKYTFRDYEKMANK-----V 210
Query: 135 AGLNFPASRQLTPLDHEVLFWRASA-DRPIVVEYGSDMSGSGFSXXXXXXXXXXXXXXXX 193
+ ++ L E FWR A + VEY D+ GS FS
Sbjct: 211 FAKKYSSASCLPAKYVEEEFWREIAFGKMDFVEYACDVDGSAFSSSPHD----------- 259
Query: 194 XXXXHLGETAWNMRGVARSPGSLLRFMPEDVPGVTTPMLYVGMMFSWFAWHVEDHDLHSL 253
LG++ WN++ +R S+LR + +PGVT PMLY+GM+FS FAWHVEDH L+S+
Sbjct: 260 ----QLGKSNWNLKNFSRLSNSVLRLLQTPIPGVTDPMLYIGMLFSMFAWHVEDHYLYSI 315
Query: 254 NYMHLGAAKTWYGVPRDAALAFEDVVREHGYGGEVNPLE----TFATLGQKTTVMSPEVL 309
NY H GA KTWYG+P DAA FE V + Y ++ E F L KTT+ P VL
Sbjct: 316 NYHHCGAFKTWYGIPGDAAPGFEKVASQFVYNKDILVGEGEDAAFDVLLGKTTMFPPNVL 375
Query: 310 VESGIPCCRLVQNAGEFVVTFPGSYHCGFSHGFNCGEASNIATPEWLRIAKEAAIRRASI 369
++ +P + VQ GEFV+TFP SYH GFSHGFNCGEA N A +W + A+ R A +
Sbjct: 376 LDHNVPVYKAVQKPGEFVITFPRSYHAGFSHGFNCGEAVNFAISDWFPLGSVASRRYALL 435
Query: 370 NRPPMVSHYQLL 381
NR P+++H +LL
Sbjct: 436 NRTPLLAHEELL 447
>Os05g0196500 Transcription factor jumonji, JmjN domain containing protein
Length = 1238
Score = 173 bits (439), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 167/404 (41%), Gaps = 68/404 (16%)
Query: 25 APEFRPTAAEFADPVSYILKIEPAAAPYGICXXX----------XXXXXXXXXATFSNLS 74
AP F PT EF D + YI I P A PYGIC + FS
Sbjct: 154 APVFYPTEEEFEDTLKYIESIRPMAEPYGICRIVPPSSWKPPCLLKDKSIWEGSKFSTRV 213
Query: 75 RSFAALHPDDRSP------------------SFPTRHQQVGLCPRRTRPGLKPVWRSSHR 116
+ L S + T H Q G+ R G +P
Sbjct: 214 QKVDKLQNRKSSKKGRRGGMMKRRKLAESEENSATAHTQTGMQQSPERFGFEP----GPE 269
Query: 117 YTLPQFESKAGATRKSLLAGLNFPASRQLTPLDH-------EVLFWRASA--DRPIVVEY 167
+TL F+ A K R+ T +D E +WR I V Y
Sbjct: 270 FTLQTFQKYADDFSKQYF--------RKDTSMDSVPSVEDIEGEYWRIVEVPTEEIEVIY 321
Query: 168 GSDMS----GSGFSXXXXXXXXXXXXXXXXXXXXHLGETAWNMRGVARSPGSLLRFMPED 223
G+D+ GSGF ++ WN+ + R GS+L F D
Sbjct: 322 GADLETGTFGSGFPKLSPETKSDAEDK--------YAQSGWNLNNLPRLQGSVLSFEGGD 373
Query: 224 VPGVTTPMLYVGMMFSWFAWHVEDHDLHSLNYMHLGAAKTWYGVPRDAALAFEDVVREHG 283
+ GV P +YVGM FS F WHVEDH L+SLNYMH GA K WYGVP A+ E +R+H
Sbjct: 374 ISGVLVPWVYVGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVPGKDAVNLESAMRKH- 432
Query: 284 YGGEVNPL--ETFATLGQKTTVMSPEVLVESGIPCCRLVQNAGEFVVTFPGSYHCGFSHG 341
+ L E L T SP +L G+ R VQ+ GEFV+TFP +YH GF+ G
Sbjct: 433 ----LPELFEEQPDLLHNLVTQFSPSLLKSEGVHVYRCVQHEGEFVLTFPRAYHAGFNCG 488
Query: 342 FNCGEASNIATPEWLRIAKEAAIRRASINRPPMVSHYQLLYDLA 385
FNC EA N+A +WL I A R +SH +LL A
Sbjct: 489 FNCAEAVNVAPIDWLPIGHNAVELYREQARKITISHDKLLLGAA 532
>Os05g0302300 Transcription factor jumonji, JmjN domain containing protein
Length = 971
Score = 169 bits (427), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 143/293 (48%), Gaps = 32/293 (10%)
Query: 111 WRSSHRYTLPQFESKAGATRKSLLAGLNFPASRQLTPLDHEVLFWRASAD-------RPI 163
++S +TL +F+ A ++ G+ L+ + + W+ S D R +
Sbjct: 191 FQSGSDFTLDEFQKYADEFKQQYF-GIKGSDEIPLSEIKKKKKNWQPSVDEIEGEYWRIV 249
Query: 164 V-------VEYGSDMSGSGFSXXXXXXXXXXXXXXXXXXXXHLGETAWNMRGVARSPGSL 216
V V+YG+D+ S FS G + WN+ + R PGS+
Sbjct: 250 VCPTDEVEVDYGADLDTSMFSSGFSKLSSDSNRRDP------YGLSCWNLNNLPRIPGSV 303
Query: 217 LRFMPEDVPGVTTPMLYVGMMFSWFAWHVEDHDLHSLNYMHLGAAKTWYGVPRDAALAFE 276
L F ED+ GV P LYVGM FS F WHVEDH L+S+NYMH G K WYGVP A+ E
Sbjct: 304 LSFETEDISGVVVPWLYVGMCFSSFCWHVEDHFLYSMNYMHFGEPKVWYGVPGADAVKLE 363
Query: 277 DVVREHGYGGEVNPLETFA----TLGQKTTVMSPEVLVESGIPCCRLVQNAGEFVVTFPG 332
+ +R+ N F L + T +SP VL G+P R+VQN GEFV+T P
Sbjct: 364 EAMRK-------NLPRLFEEQPDLLHELVTQLSPSVLKSEGVPVYRVVQNPGEFVLTLPR 416
Query: 333 SYHCGFSHGFNCGEASNIATPEWLRIAKEAAIRRASINRPPMVSHYQLLYDLA 385
+YH GF+ GFNC EA N+A +WL + A R +SH +LL A
Sbjct: 417 AYHSGFNCGFNCAEAVNVAPVDWLPHGQCAVELYREQRRKTSISHDKLLLKTA 469
>Os03g0148800 Zinc finger, C2H2-type domain containing protein
Length = 651
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 80/109 (73%)
Query: 1162 KQAVEYSCDIEGCSMSFRTKRDLSLHKSDICPVKGCGKKFFSHKYLLQHRKVHTDDRPLT 1221
K+A + C+I+ C M+F+ + +LS+HK + C VK CG+ F SHKYL +H+ +H DD P
Sbjct: 535 KRAKRFQCEIDYCRMTFKNRAELSVHKKNTCTVKSCGRHFRSHKYLRRHQSIHNDDMPYK 594
Query: 1222 CPWKGCNMAFKWPWARTEHLRVHTGDRPYVCHEPGCAQTFRFVSDFSRH 1270
CPW+GC+MAFKW W R EH +VH G RPY C PGC++ ++FVSDF+RH
Sbjct: 595 CPWEGCSMAFKWSWDRGEHFQVHAGKRPYKCTTPGCSKIYKFVSDFTRH 643
>Os03g0151300 Similar to Early flowering 6
Length = 118
Score = 143 bits (361), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 88/118 (74%)
Query: 319 LVQNAGEFVVTFPGSYHCGFSHGFNCGEASNIATPEWLRIAKEAAIRRASINRPPMVSHY 378
LVQ GEFVVTFP +YH GFSHGFNCGEA+N ATP+WL+ AKEAA+RRA +N PM+SH
Sbjct: 1 LVQYPGEFVVTFPRAYHVGFSHGFNCGEAANFATPQWLKFAKEAAVRRAVMNYLPMLSHQ 60
Query: 379 QLLYDLALSMRFREPSNGEMETRSSRIKEKKKCEGEQLVKKMFIQNVIEDNELLSHLL 436
QLLY LA+S R P R+SR++++KK + E LVK+ F+Q++I +NEL+ L
Sbjct: 61 QLLYLLAVSFISRNPRELLSGIRTSRLRDRKKEDRELLVKQEFLQDMISENELICSFL 118
>Os12g0169500
Length = 171
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 18 WLRSLPVAPEFRPTAAEFADPVSYILKIEPAAAPYGICXXXXXXXXXXXXATFSNLSRSF 77
WL++LPVAPE+ PT EFADP++YIL+I+P A+ GIC T L +
Sbjct: 48 WLQTLPVAPEYHPTLVEFADPIAYILRIKPEASRNGICKIVPLLLQPPEDDTIRRLLQC- 106
Query: 78 AALHPDDRSPSFPTRHQQVGLCPRRTRPGLKPVWRSSHRYTLPQFESKAGATRKSLLAGL 137
R P P QVGL + R + VW S RYTL F +K S A L
Sbjct: 107 -------RQP-LPDLPHQVGLSTKNRRAASRRVWESGERYTLEAFCAKVPEFEPSRHAAL 158
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.130 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 43,594,880
Number of extensions: 1860453
Number of successful extensions: 5101
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 5081
Number of HSP's successfully gapped: 14
Length of query: 1286
Length of database: 17,035,801
Length adjustment: 113
Effective length of query: 1173
Effective length of database: 11,135,619
Effective search space: 13062081087
Effective search space used: 13062081087
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 162 (67.0 bits)