BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0867300 Os01g0867300|AK067919
(266 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0867300 Similar to OSE2-like protein (Fragment) 410 e-115
Os05g0437700 Similar to OSE2-like protein (Fragment) 164 6e-41
Os01g0813100 Eukaryotic transcription factor, DNA-binding d... 79 3e-15
Os07g0686100 Similar to Abscisic acid responsive elements-b... 73 2e-13
Os06g0211200 Similar to Abscisic acid responsive elements-b... 72 5e-13
Os05g0489700 Similar to BZIP protein BZO2H3 (Fragment) 68 6e-12
Os02g0175100 Similar to Transcriptional activator protein 65 4e-11
Os02g0766700 Similar to Abscisic acid responsive elements-b... 64 9e-11
>Os01g0867300 Similar to OSE2-like protein (Fragment)
Length = 266
Score = 410 bits (1054), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/266 (80%), Positives = 213/266 (80%)
Query: 1 MMASRVMASSSPSHTASDXXXXXXXXXXXXXXXXXXMNVEEILRGIYADMPTPALPLVGG 60
MMASRVMASSSPSHTASD MNVEEILRGIYADMPTPALPLVGG
Sbjct: 1 MMASRVMASSSPSHTASDLARFAAGRGGGGSAGLGSMNVEEILRGIYADMPTPALPLVGG 60
Query: 61 DRPMSPLPAPDVAAAPRTAEEVWKEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
DRPMSPLPAPDVAAAPRTAEEVWKEI
Sbjct: 61 DRPMSPLPAPDVAAAPRTAEEVWKEITGAGVAAAAGGVVPPAAAAAAAPAVVAGAGAGTG 120
Query: 121 XEMTLEDFLAREGAVKEDEAVVTDPSAAKGQVVMGFLNGAEVTGGVTGGRSRKRHLMDPM 180
EMTLEDFLAREGAVKEDEAVVTDPSAAKGQVVMGFLNGAEVTGGVTGGRSRKRHLMDPM
Sbjct: 121 AEMTLEDFLAREGAVKEDEAVVTDPSAAKGQVVMGFLNGAEVTGGVTGGRSRKRHLMDPM 180
Query: 181 DRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFKEQEEQHQKRLKE 240
DRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFKEQEEQHQKRLKE
Sbjct: 181 DRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFKEQEEQHQKRLKE 240
Query: 241 LKEMVVPVIIRKTSARDLRRTNSMEW 266
LKEMVVPVIIRKTSARDLRRTNSMEW
Sbjct: 241 LKEMVVPVIIRKTSARDLRRTNSMEW 266
>Os05g0437700 Similar to OSE2-like protein (Fragment)
Length = 179
Score = 164 bits (415), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 123/201 (61%), Gaps = 31/201 (15%)
Query: 75 APRTAEEVWKEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMTLEDFLAREGA 134
A RTAEEVWKEI EMTLEDFLARE
Sbjct: 1 ARRTAEEVWKEISSSGGLSAPAPAPAAGAAGRGGGP-----------EMTLEDFLARED- 48
Query: 135 VKEDEAVVTDP--SAAKGQVVMGFLNGAEVTGGVTGGRSR-------KRHLMDPMDRAAM 185
DP +A +G +V+GF N E G GGR KR LMDP DRAAM
Sbjct: 49 ---------DPRATAVEGNMVVGFPNVTEGVGTAGGGRGGGGGGRGRKRTLMDPADRAAM 99
Query: 186 QRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFKEQEEQHQKRLKELKEMV 245
QRQKRMIKNRESAARSRERKQAYIAELE+ V +LEEE+A++ +EQEE++QKRLKE+KE
Sbjct: 100 QRQKRMIKNRESAARSRERKQAYIAELEAQVAELEEEHAQLLREQEEKNQKRLKEIKEQA 159
Query: 246 VPVIIRKTSARDLRRTNSMEW 266
V V+IRK + +DLRRTNSMEW
Sbjct: 160 VAVVIRKKT-QDLRRTNSMEW 179
>Os01g0813100 Eukaryotic transcription factor, DNA-binding domain containing
protein
Length = 345
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 140 AVVTDPSAAKGQVVMGFLNGAEVTGGVTGGRSRKRHLMDPMDRAAMQRQKRMIKNRESAA 199
+ +PS + GQ G + G ++ T GR R D D+ +RQKRMIKNRESAA
Sbjct: 227 GAILEPSYSDGQTSSGMIGG--MSDSQTPGRKRGMS-GDVADKLMERRQKRMIKNRESAA 283
Query: 200 RSRERKQAYIAELESLVTQLEEENAKMFKEQEEQHQKRLKELKEMVVPVIIRKTSARDLR 259
RSR RKQAY ELE+ V++LEEEN ++ +++E + EL E++ V + + + LR
Sbjct: 284 RSRARKQAYTNELENKVSRLEEENVRLKRQKESDY----LELDELICAVPVPEPKYQ-LR 338
Query: 260 RTNSMEW 266
RT+S ++
Sbjct: 339 RTSSADF 345
>Os07g0686100 Similar to Abscisic acid responsive elements-binding factor
Length = 274
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 69/134 (51%), Gaps = 31/134 (23%)
Query: 122 EMTLEDFLAREGAVKEDEAVVTDPSAAKG-------------QVVMGFLNGAEVTG---- 164
EMTLEDFL+R G + A +G Q V G +GA V G
Sbjct: 92 EMTLEDFLSRAGVAVDGAASAAGAHWLRGHYPPPPPPTTTTLQYVGG--SGAVVDGVYNR 149
Query: 165 ----GVTG--------GRSRKRHLMDPMDRAAMQRQKRMIKNRESAARSRERKQAYIAEL 212
GV G GR R + +++ +RQKRMIKNRESAARSR RKQAY EL
Sbjct: 150 VDGHGVAGFLSQVGVAGRKRGGGVDGVVEKTVERRQKRMIKNRESAARSRARKQAYTNEL 209
Query: 213 ESLVTQLEEENAKM 226
E+ +++LEEEN ++
Sbjct: 210 ENKISRLEEENQRL 223
>Os06g0211200 Similar to Abscisic acid responsive elements-binding factor
(ABA-responsive element binding protein 1) (AREB1)
Length = 324
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 88/188 (46%), Gaps = 48/188 (25%)
Query: 122 EMTLEDFLAREGAVKED--EAVVTDPSA----------------AKGQVVMG-------- 155
EMTLE+FL R G V+ED + +V P A A G +
Sbjct: 132 EMTLEEFLVRAGVVREDMGQTIVLPPQAQALFPGSNVVAPAMQLANGMLPGVVGVAPGAA 191
Query: 156 ------------FLNG-AEVTGGVTGGRSRKRHLMDP---------MDRAAMQRQKRMIK 193
LNG +V GG S + D +++ +RQ+RMIK
Sbjct: 192 AAMTVAAPATPVVLNGLGKVEGGDLSSLSPVPYPFDTALRVRKGPTVEKVVERRQRRMIK 251
Query: 194 NRESAARSRERKQAYIAELESLVTQLEEENAKMFKEQEEQHQKRLKELKEMVVPVIIRKT 253
NRESAARSR RKQAYI ELE+ V +L+E+ A++ K+Q E QK+ E+ E + + K
Sbjct: 252 NRESAARSRARKQAYIMELEAEVAKLKEQKAELQKKQVEMIQKQNDEVMERITQQLGPKA 311
Query: 254 SARDLRRT 261
LRRT
Sbjct: 312 KRFCLRRT 319
>Os05g0489700 Similar to BZIP protein BZO2H3 (Fragment)
Length = 335
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 59/96 (61%), Gaps = 11/96 (11%)
Query: 140 AVVTDPSAAKGQV---VMGFLNGAEVTGGVTGGRSRKRHLMDPM-DRAAMQRQKRMIKNR 195
V DP + GQ+ ++G L+ + G RKR + D+ +RQKRMIKNR
Sbjct: 222 GAVLDPIYSDGQITSPMLGALSDPQTPG-------RKRCATGEIADKLVERRQKRMIKNR 274
Query: 196 ESAARSRERKQAYIAELESLVTQLEEENAKMFKEQE 231
ESAARSR RKQAY ELE+ V +LEEEN ++ K++E
Sbjct: 275 ESAARSRARKQAYTNELENKVLRLEEENERLKKQKE 310
>Os02g0175100 Similar to Transcriptional activator protein
Length = 278
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 14/88 (15%)
Query: 160 AEVTGGVTGGRSRKRHLMD-----------PMDRAAMQRQKRMIKNRESAARSRERKQAY 208
++ GG +G S L+D P+D ++R +RM+ NRESA RSR+RKQA+
Sbjct: 90 SQTLGGTSGSDSESESLLDIEGGPCEQSTNPLD---VKRVRRMVSNRESARRSRKRKQAH 146
Query: 209 IAELESLVTQLEEENAKMFKEQEEQHQK 236
+A+LES V QL ENA +FK+ + +Q+
Sbjct: 147 LADLESQVDQLRGENASLFKQLTDANQQ 174
>Os02g0766700 Similar to Abscisic acid responsive elements-binding factor
(ABA-responsive element binding protein 2) (AREB2)
Length = 357
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 8/91 (8%)
Query: 180 MDRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFKEQ----EEQHQ 235
+++ +RQ+RMIKNRESAARSR+RKQAY+ ELE+ V +L+E N ++ K+Q E+Q
Sbjct: 271 IEKVVERRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKELNDELQKKQDEMLEQQKN 330
Query: 236 KRLKELKEMVVPVIIRKTSARDLRRTNSMEW 266
+ L+ + V P R LRRT + W
Sbjct: 331 EVLERMSRQVGPTAKRIC----LRRTLTGPW 357
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.126 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,172,520
Number of extensions: 275410
Number of successful extensions: 1721
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1714
Number of HSP's successfully gapped: 11
Length of query: 266
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 167
Effective length of database: 11,866,615
Effective search space: 1981724705
Effective search space used: 1981724705
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 155 (64.3 bits)