Os01g0867300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to OSE2-like protein (Fragment).
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Os01g0867300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to OSE2-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.41 | 0.457 | 11.9 | 0.842 | 2.41 | -1.72 | -0.607 | 2.47 | 0.147 | 23.9 | 25.44 | 889 | -- | -- |
| 95.85 | 0.456 | 12 | 0.398 | 2.39 | -1.45 | -0.46 | -- | 0.0264 | 0.0145 | 25.63 | 932 | -- | -- |
| 95.77 | 0.456 | 11.9 | 0.8 | 2.41 | -1.69 | -- | 2.17 | 0.113 | 23.9 | 25.7 | 893 | -- | -- |
| 96.64 | 0.458 | 12 | 0.413 | 2.4 | -1.47 | -- | -- | 0.026 | 24 | 25.65 | 919 | -- | -- |
| 257.05 | 0.751 | 11.8 | 1.03 | -- | -2.76 | -- | 2.61 | 0.511 | -- | 21.4 | 8 | -- | -- |
| 148.09 | 0.571 | 12 | 0.0256 | 2.08 | -- | -0.784 | -- | -0.0544 | 0.436 | -- | -- | -- | -- |
| 150.73 | 0.575 | 12 | 0.056 | 2.08 | -- | -- | -- | -0.0504 | 0.419 | -- | -- | -- | -- |
| 262.7 | 0.758 | 11.9 | 0.613 | -- | -2.61 | -- | -- | 0.391 | -- | 21.1 | 10 | -- | -- |
| 100.87 | 0.468 | 12 | -- | 2.37 | -1.37 | -- | -- | -0.0269 | 24 | 25.76 | 912 | -- | -- |
| 422.28 | 0.96 | 12 | 0.127 | -- | -- | -- | -- | -0.0164 | -- | -- | -- | -- | -- |
| 150.81 | 0.574 | 12 | -- | 2.08 | -- | -- | -- | -0.0566 | 0.421 | -- | -- | -- | -- |
| 272.25 | 0.771 | 11.9 | -- | -- | -2.49 | -- | -- | 0.306 | -- | 21.1 | 8 | -- | -- |
| 422.7 | 0.96 | 12 | -- | -- | -- | -- | -- | -0.0305 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.71 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 8 | 96.29 | temperature | 25 | 720 | > th | dose dependent | rect. | 9 | 21 |
| 13 | 96.39 | temperature | 25 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 47 | 96.74 | temperature | 25 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 50 | 96.80 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 83 | 97.12 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 89 | 97.28 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 103 | 97.45 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 110 | 97.49 | humidity | 80 | 43200 | > th | dose dependent | rect. | 12 | 16 |
| 112 | 97.49 | humidity | 80 | 43200 | > th | dose dependent | rect. | 11 | 18 |
| 115 | 97.54 | humidity | 90 | 43200 | < th | dose independent | rect. | 14 | 15 |
| 118 | 97.55 | temperature | 25 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 133 | 97.83 | temperature | 25 | 720 | > th | dose dependent | sin | 20 | NA |
| 137 | 97.88 | temperature | 25 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 140 | 97.91 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 169 | 98.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 8 |
| 170 | 98.25 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 4 |
| 180 | 98.32 | humidity | 80 | 43200 | > th | dose dependent | sin | 15 | NA |
| 186 | 98.34 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 194 | 98.36 | humidity | 90 | 43200 | > th | dose independent | rect. | 14 | 15 |
| 206 | 98.40 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 214 | 98.42 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 326 | 98.82 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 6 |
| 333 | 98.84 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 356 | 98.91 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 373 | 98.94 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 395 | 98.99 | humidity | 90 | 43200 | < th | dose independent | sin | 12 | NA |
| 396 | 98.99 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 398 | 98.99 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 458 | 99.14 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 8 |
| 485 | 99.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 488 | 99.23 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 512 | 99.30 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 514 | 99.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 527 | 99.35 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 531 | 99.36 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 576 | 99.50 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 594 | 99.56 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 619 | 99.67 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 5 |
| 629 | 99.75 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 641 | 99.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 672 | 99.92 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 691 | 99.98 | humidity | 90 | 43200 | > th | dose independent | sin | 13 | NA |
| 694 | 99.99 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 745 | 100.17 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 767 | 100.24 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 769 | 100.24 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 770 | 100.25 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 771 | 100.25 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 778 | 100.26 | temperature | 20 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 794 | 100.32 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 865 | 100.47 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 22 |
| 902 | 100.58 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 914 | 100.61 | temperature | 25 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 919 | 100.63 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 1 |