BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0867300 Os01g0867300|AK067919
(266 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G44080.1 | chr5:17738787-17739734 REVERSE LENGTH=316 119 2e-27
AT1G03970.1 | chr1:1018237-1019049 FORWARD LENGTH=271 117 5e-27
AT2G41070.1 | chr2:17131249-17132208 FORWARD LENGTH=263 75 3e-14
AT2G36270.1 | chr2:15204980-15206571 REVERSE LENGTH=443 70 9e-13
AT3G56850.1 | chr3:21046554-21047894 REVERSE LENGTH=298 67 8e-12
AT4G34000.1 | chr4:16296008-16297971 FORWARD LENGTH=455 65 3e-11
AT4G35900.1 | chr4:17004746-17005952 FORWARD LENGTH=286 60 1e-09
AT3G19290.3 | chr3:6687956-6689784 FORWARD LENGTH=433 59 3e-09
AT2G17770.2 | chr2:7723103-7723951 FORWARD LENGTH=196 57 7e-09
AT1G49720.2 | chr1:18400826-18402362 FORWARD LENGTH=404 57 1e-08
AT1G45249.3 | chr1:17165420-17167415 REVERSE LENGTH=428 56 2e-08
AT5G24800.1 | chr5:8515259-8516541 FORWARD LENGTH=278 50 1e-06
>AT5G44080.1 | chr5:17738787-17739734 REVERSE LENGTH=316
Length = 315
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 104/174 (59%), Gaps = 34/174 (19%)
Query: 123 MTLEDFLAREGAVKEDEAVVT-----------------DPSA-----------AKGQVVM 154
MTLEDFLA+ A EDE VT D SA +G +V
Sbjct: 146 MTLEDFLAK--AAVEDETAVTASAEDLDVKIPVTNYGFDHSAPPHNPFQMIDKVEGSIV- 202
Query: 155 GFLNGAEVTGGVTGGRSRKRHLMDPMDRAAMQRQKRMIKNRESAARSRERKQAYIAELES 214
F NG +V GG G+ R R +++P+D+AA QRQ+RMIKNRESAARSRERKQAY ELE+
Sbjct: 203 AFGNGLDVYGGGARGK-RARVMVEPLDKAAAQRQRRMIKNRESAARSRERKQAYQVELEA 261
Query: 215 LVTQLEEENAKMFKEQEEQHQKRLKELKEMVVPVI--IRKTSARDLRRTNSMEW 266
L +LEEEN + KE E++ ++R ++L E V+PV+ ++ R LRR S+EW
Sbjct: 262 LAAKLEEENELLSKEIEDKRKERYQKLMEFVIPVVEKPKQQPPRFLRRIRSLEW 315
>AT1G03970.1 | chr1:1018237-1019049 FORWARD LENGTH=271
Length = 270
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 16/159 (10%)
Query: 123 MTLEDFLAR----EGAVKE-DEAVVTDPSAAKGQVVMGF---------LNGAEVTGGVTG 168
MTLEDFLA+ EGA E D + T+ G F + + GGVT
Sbjct: 113 MTLEDFLAKAEMDEGASDEIDVKIPTERLNNDGSYTFDFPMQRHSSFQMVEGSMGGGVTR 172
Query: 169 GRSRKRHLMDPMDRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFK 228
G+ R R +M+ MD+AA QRQKRMIKNRESAARSRERKQAY ELE+L +LEEEN ++ K
Sbjct: 173 GK-RGRVMMEAMDKAAAQRQKRMIKNRESAARSRERKQAYQVELETLAAKLEEENEQLLK 231
Query: 229 EQEEQHQKRLKELKEMVVPVIIR-KTSARDLRRTNSMEW 266
E EE ++R K+L E+++PV + + +R L R++S+EW
Sbjct: 232 EIEESTKERYKKLMEVLIPVDEKPRPPSRPLSRSHSLEW 270
>AT2G41070.1 | chr2:17131249-17132208 FORWARD LENGTH=263
Length = 262
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 84/165 (50%), Gaps = 35/165 (21%)
Query: 122 EMTLEDFLAREGAVKE----DEAVVTDPSAAKGQVVMGFLNGAEVTGGVT---------- 167
E+TLED L R G V E E VV A+ GQ V + G +T
Sbjct: 107 EITLEDLLLRAGVVTETVVPQENVVN--IASNGQWVEYHHQPQQQQGFMTYPVCEMQDMV 164
Query: 168 --GGRS-------RKRHLMDPMDRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQ 218
GG S RKR + +++ +RQKRMIKNRESAARSR RKQAY ELE V++
Sbjct: 165 MMGGLSDTPQAPGRKRVAGEIVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSR 224
Query: 219 LEEENAKMFKEQEEQHQKRLKELKEMVVPVIIRKTSARDLRRTNS 263
LEEEN K+ +RLKE+ E ++P LRRTNS
Sbjct: 225 LEEENEKL---------RRLKEV-EKILPSEPPPDPKWKLRRTNS 259
>AT2G36270.1 | chr2:15204980-15206571 REVERSE LENGTH=443
Length = 442
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 53/76 (69%)
Query: 168 GGRSRKRHLMDPMDRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMF 227
G R RKR + P+++ +RQ+RMIKNRESAARSR RKQAY ELE+ + QL+EENA++
Sbjct: 339 GLRGRKRVVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLK 398
Query: 228 KEQEEQHQKRLKELKE 243
E +KR ++ E
Sbjct: 399 HALAELERKRKQQYFE 414
>AT3G56850.1 | chr3:21046554-21047894 REVERSE LENGTH=298
Length = 297
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 76/277 (27%)
Query: 37 MNVEEILRGIY---ADMPTPALPLVGGDRPMSPLPAPDVAAAPR-----TAEEVWKEIXX 88
MN++E+L+ + A+ P+ ++ + GG L PR T +EVWK+I
Sbjct: 44 MNLDELLKSVCSVEANQPS-SMAVNGGAAAQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQ 102
Query: 89 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMTLEDFLAREGAVKE-------DEAV 141
EMTLED L + G V E D V
Sbjct: 103 NKNGGSAHERRDKQPTLG---------------EMTLEDLLLKAGVVTETIPGSNHDGPV 147
Query: 142 VTD------------------------PSAAKGQVVMGF--------LNGAEVTGGVTGG 169
PS + Q M + ++ + + GG++
Sbjct: 148 GGGSAGSGAGLGQNITQVGPWIQYHQLPSMPQPQAFMPYPVSDMQAMVSQSSLMGGLSDT 207
Query: 170 RSRKRHLM---DPMDRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKM 226
++ R + + +++ +RQKRMIKNRESAARSR RKQAY ELE V++LEEEN ++
Sbjct: 208 QTPGRKRVASGEVVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENERL 267
Query: 227 FKEQEEQHQKRLKELKEMVVPVIIRKTSARDLRRTNS 263
K++E E ++P + R LRRT+S
Sbjct: 268 RKQKE----------VEKILPSVPPPDPKRQLRRTSS 294
>AT4G34000.1 | chr4:16296008-16297971 FORWARD LENGTH=455
Length = 454
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 169 GRSRKRHLMDPMDRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFK 228
GR RK + +++ +RQKRMIKNRESAARSR RKQAY ELE+ + QL+E N ++ K
Sbjct: 359 GRVRKTGAV--LEKVIERRQKRMIKNRESAARSRARKQAYTMELEAEIAQLKELNEELQK 416
Query: 229 EQEEQHQKRLKELKEMVVPVIIRKTSARDLRRTNSMEW 266
+Q E +K+ +L E + + LRRT + W
Sbjct: 417 KQVEIMEKQKNQLLEPLRQPWGMGCKRQCLRRTLTGPW 454
>AT4G35900.1 | chr4:17004746-17005952 FORWARD LENGTH=286
Length = 285
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%)
Query: 178 DPMDRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFKEQEE 232
D + + +R KRMIKNRESAARSR RKQAY ELE V L+ ENA++ ++Q++
Sbjct: 208 DSNEGSGNRRHKRMIKNRESAARSRARKQAYTNELELEVAHLQAENARLKRQQDQ 262
>AT3G19290.3 | chr3:6687956-6689784 FORWARD LENGTH=433
Length = 432
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 171 SRKRHLMDPMDRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFKEQ 230
+R R +++ +RQ+RMIKNRESAARSR RKQAY ELE+ + +L++ N ++ K+Q
Sbjct: 338 NRGRRSNTGLEKVIERRQRRMIKNRESAARSRARKQAYTLELEAEIEKLKKTNQELQKKQ 397
Query: 231 EE----QHQKRLKE 240
E Q ++LKE
Sbjct: 398 AEMVEMQKNEQLKE 411
>AT2G17770.2 | chr2:7723103-7723951 FORWARD LENGTH=196
Length = 195
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%)
Query: 173 KRHLMDPMDRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFKEQEE 232
K+ D D +R KRMIKNRESAARSR RKQAY ELE + L+ ENA++ +QE+
Sbjct: 113 KKRGQDSDDTRGDRRYKRMIKNRESAARSRARKQAYTNELELEIAHLQTENARLKIQQEQ 172
>AT1G49720.2 | chr1:18400826-18402362 FORWARD LENGTH=404
Length = 403
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 169 GRSRKRHLMDPMDRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFK 228
GR R+ + +++ +RQKRMIKNRESAARSR RKQAY ELE+ + L+ N + K
Sbjct: 298 GRGRRSN--TGLEKVVERRQKRMIKNRESAARSRARKQAYTLELEAEIESLKLVNQDLQK 355
Query: 229 EQEE 232
+Q E
Sbjct: 356 KQAE 359
>AT1G45249.3 | chr1:17165420-17167415 REVERSE LENGTH=428
Length = 427
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 25/119 (21%)
Query: 162 VTGGVTGGRSRKRHLMDPMDRAAMQRQKRMIKNRESAARSRERKQ-----------AYIA 210
GGV G +S +++ +RQ+RMIKNRESAARSR RKQ AY
Sbjct: 320 FNGGVRGRKS------GTVEKVVERRQRRMIKNRESAARSRARKQIFTADQTIYWNAYTV 373
Query: 211 ELESLVTQLEEENAKMFKEQEEQHQKRLKEL---KEMVVPVIIRKTSARDLRRTNSMEW 266
ELE+ V +L+EEN ++ ++ Q R+ E+ +E + +++ + LRRT S W
Sbjct: 374 ELEAEVAKLKEENDEL-----QRKQARIMEMQKNQETEMRNLLQGGPKKKLRRTESGPW 427
>AT5G24800.1 | chr5:8515259-8516541 FORWARD LENGTH=278
Length = 277
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 178 DPMDRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFKE 229
DP D ++R +RM NRESA RSR RKQ Y+ +LE+ V L+ +N+ ++K+
Sbjct: 117 DPND---LKRIRRMNSNRESAKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQ 165
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.126 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,283,863
Number of extensions: 151189
Number of successful extensions: 1181
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 1180
Number of HSP's successfully gapped: 16
Length of query: 266
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 169
Effective length of database: 8,447,217
Effective search space: 1427579673
Effective search space used: 1427579673
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 111 (47.4 bits)