Os05g0489700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to BZIP protein BZO2H3 (Fragment).
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Os05g0489700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to BZIP protein BZO2H3 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.49 | 0.185 | 11.4 | 0.82 | 0.299 | 0.318 | 0.121 | 0.213 | 0.26 | 1.51 | 29.22 | 233 | -- | -- |
| 15.51 | 0.183 | 11.4 | 0.845 | 0.296 | 0.333 | 0.134 | -- | 0.267 | 1.5 | 29.29 | 232 | -- | -- |
| 15.55 | 0.184 | 11.4 | 0.808 | 0.298 | 0.317 | -- | 0.281 | 0.258 | 1.5 | 29.27 | 232 | -- | -- |
| 15.59 | 0.184 | 11.4 | 0.842 | 0.295 | 0.337 | -- | -- | 0.266 | 1.5 | 29.28 | 232 | -- | -- |
| 19.75 | 0.207 | 11.4 | 0.835 | -- | 0.425 | -- | 0.317 | 0.288 | -- | 28.77 | 200 | -- | -- |
| 18.74 | 0.203 | 11.4 | 0.792 | 0.427 | -- | 0.23 | -- | 0.248 | 2.58 | -- | -- | -- | -- |
| 18.93 | 0.204 | 11.4 | 0.786 | 0.428 | -- | -- | -- | 0.246 | 2.55 | -- | -- | -- | -- |
| 19.72 | 0.207 | 11.4 | 0.875 | -- | 0.432 | -- | -- | 0.288 | -- | 28.72 | 199 | -- | -- |
| 33.9 | 0.271 | 11.4 | -- | 0.406 | 0.254 | -- | -- | 0.136 | 2.04 | 30.61 | 532 | -- | -- |
| 29.65 | 0.254 | 11.4 | 0.804 | -- | -- | -- | -- | 0.257 | -- | -- | -- | -- | -- |
| 35.21 | 0.278 | 11.4 | -- | 0.443 | -- | -- | -- | 0.159 | 2.58 | -- | -- | -- | -- |
| 39.64 | 0.293 | 11.4 | -- | -- | 0.362 | -- | -- | 0.187 | -- | 28.7 | 199 | -- | -- |
| 46.71 | 0.319 | 11.4 | -- | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.11 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 14 |
| 15 | 14.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 23 | 14.83 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 58 | 15.00 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 5 |
| 59 | 15.01 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 63 | 15.03 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 64 | 15.03 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 73 | 15.05 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 77 | 15.05 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 90 | 15.08 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 9 |
| 96 | 15.09 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 22 |
| 103 | 15.10 | temperature | 30 | 720 | < th | dose independent | rect. | 1 | 14 |
| 122 | 15.12 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 22 |
| 132 | 15.15 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 6 |
| 156 | 15.17 | temperature | 30 | 720 | > th | dose independent | sin | 6 | NA |
| 164 | 15.17 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 166 | 15.18 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 12 |
| 183 | 15.21 | temperature | 30 | 720 | < th | dose independent | sin | 4 | NA |
| 243 | 15.26 | temperature | 30 | 720 | < th | dose independent | rect. | 2 | 10 |
| 279 | 15.29 | temperature | 10 | 270 | > th | dose dependent | sin | 0 | NA |
| 286 | 15.30 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 16 |
| 312 | 15.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 316 | 15.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 329 | 15.33 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 343 | 15.35 | temperature | 30 | 270 | < th | dose independent | rect. | 9 | 23 |
| 418 | 15.40 | temperature | 30 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 462 | 15.42 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 22 |
| 511 | 15.46 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 3 |
| 550 | 15.47 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 594 | 15.49 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 598 | 15.50 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 601 | 15.50 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 621 | 15.51 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 10 |
| 629 | 15.51 | temperature | 30 | 720 | < th | dose independent | rect. | 22 | 14 |
| 664 | 15.53 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 8 |
| 677 | 15.53 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 685 | 15.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 708 | 15.56 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 1 |
| 745 | 15.58 | temperature | 30 | 720 | > th | dose dependent | sin | 7 | NA |
| 746 | 15.58 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 764 | 15.59 | temperature | 30 | 270 | < th | dose independent | rect. | 22 | 23 |
| 767 | 15.59 | temperature | 30 | 720 | > th | dose dependent | rect. | 8 | 5 |
| 837 | 15.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 910 | 15.64 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 961 | 15.67 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 980 | 15.67 | temperature | 30 | 4320 | < th | dose independent | rect. | 22 | 12 |
| 982 | 15.67 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 14 |
| 984 | 15.67 | temperature | 30 | 4320 | < th | dose independent | rect. | 20 | 14 |