BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0489700 Os05g0489700|AK063398
(335 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0489700 Similar to BZIP protein BZO2H3 (Fragment) 479 e-136
Os01g0813100 Eukaryotic transcription factor, DNA-binding d... 293 1e-79
Os07g0686100 Similar to Abscisic acid responsive elements-b... 140 1e-33
Os09g0456200 Similar to BZIP transcription factor ABI5 117 1e-26
Os08g0472000 TRAB1 (BZIP transcription factor) 103 1e-22
Os02g0766700 Similar to Abscisic acid responsive elements-b... 95 9e-20
Os03g0322700 94 2e-19
>Os05g0489700 Similar to BZIP protein BZO2H3 (Fragment)
Length = 335
Score = 479 bits (1234), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/335 (74%), Positives = 250/335 (74%)
Query: 1 MIQAMXXXXXXXXXXXXXXXXXXXXXXXXPMQGLARQGSLYGLTLNEVQSQLGEPLLSMN 60
MIQAM PMQGLARQGSLYGLTLNEVQSQLGEPLLSMN
Sbjct: 1 MIQAMASHAGGSGGGGGGSGRDAGSAQRGPMQGLARQGSLYGLTLNEVQSQLGEPLLSMN 60
Query: 61 LDELLKSVFPXXXXXXXXXXXXXXXXQSQPALGLQRQGSITMPPELSKKTVDEVWKGIQD 120
LDELLKSVFP QSQPALGLQRQGSITMPPELSKKTVDEVWKGIQD
Sbjct: 61 LDELLKSVFPDGADLDGGGGGGGIAGQSQPALGLQRQGSITMPPELSKKTVDEVWKGIQD 120
Query: 121 VPKXXXXXXXXXXXXXQPTLGEMTLEDFLVKAGVVTDPNDLPGNMDVVXXXXXXXXXTSD 180
VPK QPTLGEMTLEDFLVKAGVVTDPNDLPGNMDVV TSD
Sbjct: 121 VPKRGAEEGGRWRRERQPTLGEMTLEDFLVKAGVVTDPNDLPGNMDVVGGAAAAAAGTSD 180
Query: 181 LNAGAQWLQQYHQQALEPQHPSIGAPYMATHLAPQPLAVATGAVLDPIYSDGQITSPMLG 240
LNAGAQWLQQYHQQALEPQHPSIGAPYMATHLAPQPLAVATGAVLDPIYSDGQITSPMLG
Sbjct: 181 LNAGAQWLQQYHQQALEPQHPSIGAPYMATHLAPQPLAVATGAVLDPIYSDGQITSPMLG 240
Query: 241 ALSDPQTPGRKRCATGEIADKLVERRQKRMIKNRESAARSRARKQAYTXXXXXXXXXXXX 300
ALSDPQTPGRKRCATGEIADKLVERRQKRMIKNRESAARSRARKQAYT
Sbjct: 241 ALSDPQTPGRKRCATGEIADKLVERRQKRMIKNRESAARSRARKQAYTNELENKVLRLEE 300
Query: 301 XXXXXXXXXXXDEILNSAPPPEPKYQLRRTSSAAF 335
DEILNSAPPPEPKYQLRRTSSAAF
Sbjct: 301 ENERLKKQKELDEILNSAPPPEPKYQLRRTSSAAF 335
>Os01g0813100 Eukaryotic transcription factor, DNA-binding domain containing
protein
Length = 345
Score = 293 bits (750), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/319 (52%), Positives = 195/319 (61%), Gaps = 22/319 (6%)
Query: 37 QGSLYGLTLNEVQSQLGEPLLSMNLDELLKSVFPXXXXXXXXXXXXXXXXQSQPALGLQR 96
QGS+Y LTL+EVQSQLGEPL SMNLDELL+SVFP Q QP GL R
Sbjct: 29 QGSMYSLTLDEVQSQLGEPLHSMNLDELLRSVFPDGLAIADGAGATTSSQQHQPGSGLLR 88
Query: 97 QGSITMPPELSKKTVDEVWKGIQDVPKXXXXXXXXXXX-----XXQPTLGEMTLEDFLVK 151
QGSITMPPELSKKTVDEVWKGIQ PK QPTLGE+TLEDFLVK
Sbjct: 89 QGSITMPPELSKKTVDEVWKGIQAAPKRNAETGGGGGGGRRRRERQPTLGEVTLEDFLVK 148
Query: 152 AGVVT-----DPNDLPGNMDVVXXXXXXXXXTSDLNAGAQWLQQYHQQ--ALEPQHPS-- 202
AGVVT + +D+ GN+D V T DL G+ W++QY QQ + + H
Sbjct: 149 AGVVTQGSLKELSDV-GNVDPVGRGVTATG-TVDLAPGSHWIEQYKQQIASTDAHHHGQQ 206
Query: 203 -IGAPYMATHLAPQPLAVATGAVLDPIYSDGQITSPMLGALSDPQTPGRKRCATGEIADK 261
+ Y L PQPL V GA+L+P YSDGQ +S M+G +SD QTPGRKR +G++ADK
Sbjct: 207 GVQGAYFPNRLVPQPLNVGPGAILEPSYSDGQTSSGMIGGMSDSQTPGRKRGMSGDVADK 266
Query: 262 LVERRQKRMIKNRESAARSRARKQAYTXXXXXXXXXXXXXXXXXXXXXXX-----DEILN 316
L+ERRQKRMIKNRESAARSRARKQAYT DE++
Sbjct: 267 LMERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLKRQKESDYLELDELIC 326
Query: 317 SAPPPEPKYQLRRTSSAAF 335
+ P PEPKYQLRRTSSA F
Sbjct: 327 AVPVPEPKYQLRRTSSADF 345
>Os07g0686100 Similar to Abscisic acid responsive elements-binding factor
Length = 274
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 141/326 (43%), Gaps = 95/326 (29%)
Query: 34 LARQGSLYGLTLNEVQSQLGEPLLSMNLDELLKSVFPXXXXXXXXXXXXXXXXQSQPALG 93
L+RQGS+Y LTLNEV+S LGEPL SMNLD+LL++V P
Sbjct: 20 LSRQGSVYSLTLNEVESHLGEPLRSMNLDDLLRTVLPA---------------------- 57
Query: 94 LQRQGSITMPPELSKKTVDEVWKGIQDVPKXXXXXXXXXXXXXQPTLGEMTLEDFLVKAG 153
+ +KTVDEVW+ IQ +GEMTLEDFL +AG
Sbjct: 58 -----AAAAAETAGRKTVDEVWRDIQGASTGRHHA---------TPMGEMTLEDFLSRAG 103
Query: 154 VVTDPNDLPGNMDVVXXXXXXXXXTSDLNAGAQWLQQYHQQALEPQHPSIGAPYMATHLA 213
V D + AGA WL+ ++ P ++ Y+
Sbjct: 104 VAVDG--------------------AASAAGAHWLRGHYPPPPPPTTTTL--QYVG---- 137
Query: 214 PQPLAVATGAVLDPIYS--DGQITSPMLGALSDPQTPGRKRCATGE-IADKLVERRQKRM 270
+GAV+D +Y+ DG + G LS GRKR + + +K VERRQKRM
Sbjct: 138 ------GSGAVVDGVYNRVDGH---GVAGFLSQVGVAGRKRGGGVDGVVEKTVERRQKRM 188
Query: 271 IKNRESAARSRARKQAYTXXXXXXXXXXXXXXXXXXXXXXXDE----------------- 313
IKNRESAARSRARKQAYT +
Sbjct: 189 IKNRESAARSRARKQAYTNELENKISRLEEENQRLREHKAVADFSTFPSCVDFLKAFLTQ 248
Query: 314 ----ILNSAPPPEPKYQLRRTSSAAF 335
++ P PEPK QLRRT+SA+F
Sbjct: 249 KLEPVMQIVPQPEPKQQLRRTTSASF 274
>Os09g0456200 Similar to BZIP transcription factor ABI5
Length = 376
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 130/293 (44%), Gaps = 44/293 (15%)
Query: 34 LARQGSLYGLTLNEVQSQLG-------------EPLLSMNLDELLKSVFPXXXXXXXXXX 80
LARQGS+Y LT +E QS L + SMN+DELL+S++
Sbjct: 34 LARQGSVYSLTFDEFQSALAGGGGGGGGGSGFGKDFGSMNMDELLRSIWTAEESQAMASA 93
Query: 81 XXXXXXQSQ----PALGLQRQGSITMPPELSKKTVDEVWKGI--QDVPKXXXXXXXXXXX 134
P LQRQGS+T+P LS KTVDEVW+ + + P
Sbjct: 94 SGSAAGVGVAVGAPPTSLQRQGSLTLPRTLSAKTVDEVWRNLVRDEPPPVGAADGGDMPP 153
Query: 135 XXQPTLGEMTLEDFLVKAGVVTDPNDLPGNMDVVXXXXXXXXXTSDLNAGAQWLQQY--- 191
Q TLGEMTLE+FLV+AGVV + A +L +
Sbjct: 154 QRQSTLGEMTLEEFLVRAGVVRENPPAAPPPVPPPMPPRPVPVVPKTTA---FLGNFPGA 210
Query: 192 ---HQQALEPQHPSIGAPYMATHLAPQPLAVAT-GAVLDPIYSDGQITSPMLGA--LSDP 245
AL +G P + L P+ + V GA + + Q S G LS P
Sbjct: 211 NDAGAAALGFAPLGMGDPALGNGLMPRAVPVGLPGAAVAMQTAVNQFDSGDKGNSDLSSP 270
Query: 246 QTP----------GRKRCATGEIADKLVERRQKRMIKNRESAARSRARKQAYT 288
P GR+ G +K+VERRQ+RMIKNRESAARSRARKQAYT
Sbjct: 271 TEPMPYSFEGLVRGRR---NGGGVEKVVERRQRRMIKNRESAARSRARKQAYT 320
>Os08g0472000 TRAB1 (BZIP transcription factor)
Length = 318
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 114/261 (43%), Gaps = 37/261 (14%)
Query: 59 MNLDELLKSVFPXXXXXXXXXXXXXXXXQSQPALGLQRQGSITMPPELSKKTVDEVWKGI 118
MN+DELL+S++ GLQRQGS+T+P LS KTVDEVW+ +
Sbjct: 1 MNMDELLRSIWTAEESQAMASASAAAAAAEG---GLQRQGSLTLPRTLSVKTVDEVWRDL 57
Query: 119 Q-------DVPKXXXXXXXXXXXXXQPTLGEMTLEDFLVKAGVVTDPNDLPGNMDVVXXX 171
+ QPTLGEMTLE+FLV+AGVV + M
Sbjct: 58 EREASPGAAAADGGGGGGEQQQPRRQPTLGEMTLEEFLVRAGVVRENTAAAAAMVAAAAA 117
Query: 172 XXXXXXTS-DLNAGAQWLQQY-----------HQQALEPQHPSIGAPYMATHLAPQ---- 215
+ +N + + Y P IG P M L
Sbjct: 118 PPVAPRSIPAVNNSSIFFGNYGGVNDAAAAAAGAMGFSP--VGIGDPTMGNRLMSGVAGI 175
Query: 216 --------PLAVATGAVLDPIYSDGQITSPMLGALSDPQTPGRKRCATGEIADKLVERRQ 267
P+ + G + DG ++SPM + R R + G + +K+VERRQ
Sbjct: 176 GGGAITVAPVDTSVGQMDSAGKGDGDLSSPMAPVPYPFEGVIRGRRSGGNV-EKVVERRQ 234
Query: 268 KRMIKNRESAARSRARKQAYT 288
+RMIKNRESAARSRARKQAYT
Sbjct: 235 RRMIKNRESAARSRARKQAYT 255
>Os02g0766700 Similar to Abscisic acid responsive elements-binding factor
(ABA-responsive element binding protein 2) (AREB2)
Length = 357
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 128/298 (42%), Gaps = 63/298 (21%)
Query: 34 LARQGSLYGLTLNEVQSQLG---EPLLSMNLDELLKSVFPXXXXXXXXXXXXXXXXQSQP 90
LARQGS+Y LT +E QS LG + SMN+DELL+S++ +
Sbjct: 21 LARQGSVYSLTFDEFQSTLGGVGKDFGSMNMDELLRSIWTAEESHAVGAATTTTATTASV 80
Query: 91 ALG---------LQRQGSITMPPELSKKTVDEVWK-----GIQDVPKXXXXXXXXXXXXX 136
A +QRQGS+T+P LS+KTVDEVW+ G
Sbjct: 81 AAAEHAAVGAPPVQRQGSLTLPRTLSQKTVDEVWRDMMCFGGGGASTAPAAAEPPPPAHR 140
Query: 137 QPTLGEMTLEDFLVKAGVVTDPNDLPGNMDVVXXXXXXXXXTSDLNAGAQWLQQYHQQAL 196
Q TLGE+TLE+FLV+AGVV + D+ Q + Q +
Sbjct: 141 QQTLGEITLEEFLVRAGVVRE--DMSVPPVPPAPTPTAAAVPPPPPPQQQTPMLFGQSNV 198
Query: 197 EPQHPSIGAPYMATHLAPQPLAVATGAV-----------------LDPIYSD--GQITSP 237
P + P PL++ G V + P+ S+ G++
Sbjct: 199 FP------------PMVP-PLSLGNGLVSGAVGHGGGGAASLVSPVRPVSSNGFGKMEGG 245
Query: 238 MLGALSDPQTP--------GRKRCATGEIADKLVERRQKRMIKNRESAARSRARKQAY 287
L +LS P GRK ++ ++ RQ+RMIKNRESAARSR RKQAY
Sbjct: 246 DLSSLSPSPVPYVFKGGLRGRKAPGIEKVVER----RQRRMIKNRESAARSRQRKQAY 299
>Os03g0322700
Length = 256
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 117/300 (39%), Gaps = 85/300 (28%)
Query: 33 GLARQGSLYGLTLNEVQSQLGEPLLSMNLDELLKSVFPXXXXXXXXXXXXXXXXQSQPAL 92
G++RQGSL GL L+EV+ QL +NLD+LL++
Sbjct: 14 GVSRQGSLCGLALSEVEGQL----HGVNLDDLLRTGGGG--------------------- 48
Query: 93 GLQRQGSITMPPELSKKTVDEVWKGIQDVPKXXXXXXXXXXXXXQPTLGEMTLEDFLVKA 152
+ +KTVDEVW+ IQ G+MTLEDFL +A
Sbjct: 49 ------AGAGAAAAGRKTVDEVWRDIQGATGNGFLRPAGAAA------GQMTLEDFLSRA 96
Query: 153 GVVTDPNDLPGNMDVVXXXXXXXXXTSDLNAGAQWLQQYHQQALEPQHPSIGAPYMATHL 212
G + GA+W + +H +G P
Sbjct: 97 GADS------------------GSGGGGGADGARWARAHHHH--------VGRP------ 124
Query: 213 APQPLAVATGAVLDPIYSDGQITSPMLGALSDPQTPGRKRCATGEIAD---KLVERRQKR 269
P+PL + G VLD +Y DG ++ G KR K VERR+KR
Sbjct: 125 VPRPLGLGAGPVLDALYHDGPVS-------------GSKRAPAAGEGAAAEKTVERRKKR 171
Query: 270 MIKNRESAARSRARKQAYTXXXXXXXXXXXXXXXXXXXXXXXDEILNSAPPPEPKYQLRR 329
MIKNRESAARSRARKQAYT + ++ P EPK QLRR
Sbjct: 172 MIKNRESAARSRARKQAYTNELENKISRLEEENKRLRMHKAPEPVVQYVPQQEPKNQLRR 231
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.130 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,630,037
Number of extensions: 295422
Number of successful extensions: 734
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 711
Number of HSP's successfully gapped: 8
Length of query: 335
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 234
Effective length of database: 11,762,187
Effective search space: 2752351758
Effective search space used: 2752351758
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 156 (64.7 bits)