Os02g0766700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Abscisic acid responsive elements-binding factor (ABA-responsive element binding protein 2) (AREB2).
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Os02g0766700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Abscisic acid responsive elements-binding factor (ABA-responsive element binding protein 2) (AREB2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.3 | 0.542 | 10.3 | 0.776 | 1.89 | -1.74 | 0.755 | -0.735 | 0.0587 | 8.95 | 62.29 | 806 | -- | -- |
| 133.86 | 0.539 | 10.3 | 0.737 | 1.88 | -1.73 | 0.463 | -- | 0.0652 | 8.96 | 60.56 | 807 | -- | -- |
| 134.55 | 0.54 | 10.3 | 0.74 | 1.89 | -1.76 | -- | -0.0815 | 0.05 | 8.99 | 61.67 | 810 | -- | -- |
| 134.51 | 0.54 | 10.3 | 0.736 | 1.84 | -1.75 | -- | -- | 0.0607 | 9.11 | 60.46 | 840 | -- | -- |
| 205.27 | 0.667 | 10.4 | 0.773 | -- | -1.21 | -- | -0.336 | 0.0878 | -- | 55.88 | 1437 | -- | -- |
| 177.77 | 0.625 | 10.3 | 0.775 | 1.07 | -- | 0.232 | -- | 0.144 | 8.99 | -- | -- | -- | -- |
| 177.95 | 0.625 | 10.3 | 0.783 | 1.07 | -- | -- | -- | 0.145 | 9.01 | -- | -- | -- | -- |
| 205.24 | 0.667 | 10.4 | 0.74 | -- | -1.28 | -- | -- | 0.0718 | -- | 57.57 | 1437 | -- | -- |
| 147.66 | 0.566 | 10.3 | -- | 1.64 | -1.75 | -- | -- | 0.0145 | 9.52 | 51 | 969 | -- | -- |
| 243.82 | 0.73 | 10.3 | 0.782 | -- | -- | -- | -- | 0.151 | -- | -- | -- | -- | -- |
| 194.13 | 0.652 | 10.3 | -- | 1.07 | -- | -- | -- | 0.0575 | 8.95 | -- | -- | -- | -- |
| 219.09 | 0.689 | 10.4 | -- | -- | -1.26 | -- | -- | 0.0155 | -- | 51 | 1431 | -- | -- |
| 259.95 | 0.753 | 10.4 | -- | -- | -- | -- | -- | 0.0646 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.54 | humidity | 90 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 6 | 127.31 | humidity | 60 | 720 | > th | dose dependent | sin | 16 | NA |
| 9 | 127.66 | humidity | 70 | 720 | > th | dose dependent | rect. | 9 | 17 |
| 10 | 127.67 | humidity | 80 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 16 | 128.03 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 11 |
| 29 | 128.58 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 48 | 129.21 | humidity | 80 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 60 | 129.40 | humidity | 70 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 105 | 130.03 | humidity | 80 | 720 | < th | dose independent | rect. | 11 | 10 |
| 116 | 130.16 | humidity | 80 | 720 | < th | dose independent | rect. | 15 | 6 |
| 121 | 130.19 | humidity | 80 | 720 | > th | dose independent | rect. | 15 | 6 |
| 140 | 130.44 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 149 | 130.53 | humidity | 80 | 720 | > th | dose independent | rect. | 10 | 11 |
| 186 | 130.89 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 215 | 131.26 | humidity | 90 | 720 | < th | dose dependent | sin | 15 | NA |
| 258 | 131.90 | humidity | 90 | 720 | < th | dose dependent | rect. | 15 | 9 |
| 265 | 131.96 | humidity | 60 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 321 | 132.42 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 15 |
| 328 | 132.49 | humidity | 60 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 334 | 132.51 | humidity | 60 | 720 | > th | dose dependent | rect. | 14 | 22 |
| 345 | 132.58 | humidity | 80 | 720 | < th | dose independent | sin | 19 | NA |
| 359 | 132.69 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 14 |
| 366 | 132.77 | humidity | 80 | 720 | > th | dose independent | sin | 19 | NA |
| 389 | 132.90 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 22 |
| 408 | 133.00 | radiation | 1 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 415 | 133.02 | humidity | 90 | 720 | < th | dose independent | rect. | 8 | 16 |
| 421 | 133.05 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 454 | 133.27 | humidity | 70 | 720 | > th | dose dependent | rect. | 1 | 22 |
| 462 | 133.32 | humidity | 90 | 720 | < th | dose independent | rect. | 17 | 7 |
| 474 | 133.40 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 484 | 133.43 | radiation | 1 | 1440 | < th | dose dependent | sin | 23 | NA |
| 502 | 133.49 | humidity | 90 | 720 | < th | dose independent | rect. | 6 | 18 |
| 524 | 133.61 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 531 | 133.69 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 538 | 133.72 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 555 | 133.81 | humidity | 90 | 720 | < th | dose independent | rect. | 19 | 5 |
| 586 | 133.94 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 19 |
| 610 | 134.04 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 617 | 134.10 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 17 |
| 626 | 134.12 | humidity | 60 | 720 | > th | dose dependent | no | NA | NA |
| 629 | 134.13 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 17 |
| 645 | 134.15 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 654 | 134.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 659 | 134.19 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 678 | 134.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 17 |
| 684 | 134.22 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 17 |
| 707 | 134.26 | humidity | 90 | 720 | < th | dose dependent | rect. | 15 | 16 |
| 721 | 134.29 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 23 |
| 839 | 134.73 | radiation | 1 | 1440 | > th | dose independent | sin | 23 | NA |
| 852 | 134.77 | humidity | 90 | 720 | < th | dose dependent | rect. | 13 | 18 |
| 878 | 134.84 | radiation | 1 | 720 | < th | dose independent | rect. | 20 | 23 |
| 888 | 134.85 | humidity | 80 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 925 | 134.96 | radiation | 1 | 1440 | < th | dose independent | sin | 23 | NA |
| 926 | 134.96 | humidity | 80 | 720 | > th | dose independent | rect. | 10 | 16 |
| 942 | 135.01 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 950 | 135.04 | radiation | 1 | 1440 | < th | dose dependent | sin | 16 | NA |
| 960 | 135.07 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 967 | 135.10 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 11 |
| 982 | 135.14 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 9 |