FiT-DB / Search/ Help/ Sample detail

Os05g0437700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to OSE2-like protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0173) R2 : 0.527
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.922 (0.0446) R2dC : 0.446 R2C : 0.434
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.303 (0.0365) R2dN8 : 0.0927 R2N8 : 0.0809
σ : 0.327
deviance : 48.9
__
_____
C
peak time of C : 4.26
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.07 0.27 10.3 0.102 1.03 -0.697 0.368 0.916 0.165 3.89 25.4 10 -- --
34.19 0.274 10.2 0.242 1.03 -0.775 0.672 -- 0.202 3.83 25 11 -- --
33.34 0.271 10.3 0.0667 1.03 -0.679 -- 1.12 0.156 3.89 25.5 10 -- --
35.45 0.279 10.2 0.233 1.02 -0.778 -- -- 0.205 3.86 24.72 10 -- --
77.44 0.41 10.2 0.182 -- 0.558 -- 2.08 0.378 -- 32.82 188 -- --
43.21 0.308 10.2 0.42 0.909 -- 0.65 -- 0.353 4.22 -- -- -- --
44.39 0.312 10.2 0.414 0.914 -- -- -- 0.35 4.26 -- -- -- --
83.05 0.424 10.2 0.583 -- 0.662 -- -- 0.461 -- 45.11 202 -- --
36.75 0.284 10.3 -- 1.04 -0.865 -- -- 0.164 3.82 24.77 10 -- --
89.49 0.442 10.2 0.45 -- -- -- -- 0.374 -- -- -- -- --
48.9 0.327 10.2 -- 0.922 -- -- -- 0.303 4.26 -- -- -- --
90.01 0.442 10.2 -- -- -0.978 -- -- 0.297 -- 19.12 220 -- --
94.84 0.455 10.2 -- -- -- -- -- 0.324 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.90 temperature 25 10 < th dose dependent rect. 13 23
2 33.03 temperature 25 10 < th dose dependent rect. 5 23
3 33.06 temperature 25 10 < th dose dependent rect. 23 23
4 33.11 temperature 25 10 < th dose dependent rect. 9 23
5 33.13 temperature 25 10 < th dose dependent rect. 17 23
6 33.14 temperature 25 10 < th dose dependent no NA NA
7 33.14 temperature 25 10 < th dose dependent rect. 7 23
8 33.14 temperature 25 10 < th dose dependent rect. 11 23
9 33.17 temperature 25 10 < th dose dependent rect. 15 23
12 33.20 humidity 80 43200 > th dose independent rect. 20 3
15 33.24 temperature 25 10 < th dose dependent rect. 1 23
16 33.24 temperature 25 10 < th dose dependent rect. 19 23
20 33.28 temperature 25 10 < th dose dependent rect. 3 23
27 33.34 temperature 25 90 < th dose dependent rect. 11 23
35 33.40 humidity 80 43200 > th dose independent rect. 19 5
41 33.45 wind 7 43200 < th dose dependent rect. 13 1
42 33.45 humidity 90 43200 < th dose dependent rect. 10 1
47 33.50 wind 3 14400 > th dose dependent rect. 11 5
49 33.51 humidity 80 43200 < th dose dependent rect. 3 12
58 33.53 humidity 80 43200 < th dose dependent sin 3 NA
64 33.54 wind 1 43200 > th dose dependent rect. 13 4
74 33.54 humidity 80 43200 < th dose dependent rect. 1 21
86 33.55 humidity 80 43200 < th dose dependent rect. 2 19
99 33.56 humidity 80 43200 < th dose dependent rect. 9 21
110 33.57 wind 9 43200 < th dose dependent rect. 13 4
119 33.57 humidity 80 43200 < th dose dependent rect. 19 20
149 33.58 humidity 80 43200 < th dose dependent rect. 14 23
154 33.59 humidity 70 43200 < th dose independent rect. 1 10
155 33.59 humidity 80 43200 < th dose dependent no NA NA
187 33.60 wind 9 14400 < th dose dependent rect. 11 4
239 33.62 humidity 70 43200 < th dose independent rect. 15 20
244 33.62 humidity 80 43200 < th dose dependent rect. 8 7
268 33.63 humidity 70 43200 < th dose independent rect. 12 22
301 33.64 humidity 80 43200 < th dose dependent rect. 8 15
317 33.65 humidity 70 43200 < th dose independent rect. 24 17
320 33.65 humidity 70 43200 < th dose independent rect. 19 22
323 33.65 wind 3 43200 > th dose dependent rect. 16 1
345 33.66 humidity 70 43200 < th dose independent sin 5 NA
346 33.66 humidity 70 43200 < th dose independent rect. 19 16
381 33.67 humidity 80 43200 < th dose independent rect. 19 4
420 33.68 wind 5 43200 < th dose independent rect. 16 3
467 33.69 temperature 25 10 < th dose dependent rect. 12 18
482 33.70 wind 5 14400 < th dose independent rect. 11 6
483 33.70 humidity 70 43200 < th dose independent rect. 24 22
484 33.70 humidity 70 43200 < th dose independent rect. 15 23
514 33.71 humidity 70 43200 < th dose independent no NA NA
516 33.71 wind 5 43200 < th dose independent rect. 14 5
525 33.71 humidity 70 43200 < th dose independent rect. 8 23
527 33.71 humidity 80 43200 < th dose dependent sin 18 NA
529 33.71 humidity 80 43200 < th dose dependent rect. 19 1
551 33.72 humidity 70 43200 < th dose independent rect. 1 13
554 33.72 humidity 70 43200 > th dose independent rect. 15 20
617 33.74 wind 5 43200 > th dose independent rect. 14 5
618 33.74 wind 5 14400 > th dose independent rect. 11 6
647 33.75 wind 5 43200 > th dose independent rect. 16 3
660 33.75 humidity 70 43200 > th dose independent rect. 12 22
694 33.76 humidity 70 43200 < th dose independent rect. 19 19
697 33.76 humidity 70 43200 > th dose independent rect. 1 21
699 33.76 humidity 70 43200 > th dose independent rect. 15 22
730 33.77 humidity 70 43200 > th dose independent rect. 2 9
762 33.78 humidity 70 43200 > th dose independent rect. 18 17
795 33.79 wind 5 43200 < th dose independent rect. 16 1
834 33.80 wind 5 43200 > th dose independent rect. 16 1
886 33.81 wind 5 43200 < th dose independent rect. 14 1
888 33.81 humidity 70 43200 > th dose independent rect. 1 13
913 33.82 humidity 80 43200 < th dose independent rect. 20 2
927 33.82 humidity 70 43200 > th dose independent rect. 19 23
949 33.83 humidity 70 43200 > th dose independent sin 4 NA
950 33.83 humidity 70 43200 > th dose independent no NA NA
970 33.83 wind 9 43200 < th dose dependent rect. 16 1